BLASTX nr result
ID: Dioscorea21_contig00000948
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Dioscorea21_contig00000948 (553 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value gb|ABB72820.1| oligouridylate binding protein-like protein [Sola... 77 2e-12 ref|XP_002331184.1| predicted protein [Populus trichocarpa] gi|2... 75 9e-12 emb|CBI35841.3| unnamed protein product [Vitis vinifera] 74 1e-11 ref|XP_002304117.1| predicted protein [Populus trichocarpa] gi|2... 74 1e-11 ref|XP_002270823.1| PREDICTED: nucleolysin TIAR [Vitis vinifera] 74 1e-11 >gb|ABB72820.1| oligouridylate binding protein-like protein [Solanum tuberosum] Length = 417 Score = 77.0 bits (188), Expect = 2e-12 Identities = 39/56 (69%), Positives = 46/56 (82%) Frame = -1 Query: 553 LAYERSLALSRMGSGQALMQGQHGLKQAAMGVGTGASDAMYDAGFQNVAAQQLMYY 386 LAYER LA+S+MG LM GQ+ LKQA+MG+ +GAS A+YD GFQNVAAQQLMYY Sbjct: 362 LAYERQLAMSKMGGVPGLM-GQYPLKQASMGMASGASQAIYDGGFQNVAAQQLMYY 416 >ref|XP_002331184.1| predicted protein [Populus trichocarpa] gi|222873305|gb|EEF10436.1| predicted protein [Populus trichocarpa] Length = 426 Score = 74.7 bits (182), Expect = 9e-12 Identities = 43/60 (71%), Positives = 47/60 (78%), Gaps = 4/60 (6%) Frame = -1 Query: 553 LAYERSLALSRMGSGQALM--QGQHGLKQAAMGVGT-GASDAMYDAGFQNV-AAQQLMYY 386 LAYER LA+S+MG ALM QGQH LKQA MG+G GAS A+YD GFQNV AAQQLMYY Sbjct: 366 LAYERQLAISKMGGIHALMHPQGQHPLKQATMGMGAAGASQAIYDGGFQNVAAAQQLMYY 425 >emb|CBI35841.3| unnamed protein product [Vitis vinifera] Length = 407 Score = 74.3 bits (181), Expect = 1e-11 Identities = 41/58 (70%), Positives = 45/58 (77%), Gaps = 2/58 (3%) Frame = -1 Query: 553 LAYERSLALSRMGSGQALMQGQHGLKQAAMGVG-TGASDAMYDAGFQNV-AAQQLMYY 386 LAYER LA+S+MG QGQH LKQAAMG+G GAS A+YD GFQNV AAQQLMYY Sbjct: 349 LAYERQLAMSKMGHALMHPQGQHPLKQAAMGMGAAGASQAIYDGGFQNVAAAQQLMYY 406 >ref|XP_002304117.1| predicted protein [Populus trichocarpa] gi|222841549|gb|EEE79096.1| predicted protein [Populus trichocarpa] Length = 421 Score = 74.3 bits (181), Expect = 1e-11 Identities = 42/59 (71%), Positives = 45/59 (76%), Gaps = 3/59 (5%) Frame = -1 Query: 553 LAYERSLALSRMGSGQALM--QGQHGLKQAAMGVGTGASDAMYDAGFQNV-AAQQLMYY 386 LAYER LALS+MG A M GQ LKQAAMG+G GAS A+YD GFQNV AAQQLMYY Sbjct: 362 LAYERQLALSKMGGVHAFMPPHGQLPLKQAAMGMGAGASQAIYDGGFQNVAAAQQLMYY 420 >ref|XP_002270823.1| PREDICTED: nucleolysin TIAR [Vitis vinifera] Length = 420 Score = 74.3 bits (181), Expect = 1e-11 Identities = 41/58 (70%), Positives = 45/58 (77%), Gaps = 2/58 (3%) Frame = -1 Query: 553 LAYERSLALSRMGSGQALMQGQHGLKQAAMGVG-TGASDAMYDAGFQNV-AAQQLMYY 386 LAYER LA+S+MG QGQH LKQAAMG+G GAS A+YD GFQNV AAQQLMYY Sbjct: 362 LAYERQLAMSKMGHALMHPQGQHPLKQAAMGMGAAGASQAIYDGGFQNVAAAQQLMYY 419