BLASTX nr result

ID: Dioscorea21_contig00000931 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00000931
         (821 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_001043691.1| Os01g0642900 [Oryza sativa Japonica Group] g...   246   6e-63
gb|EAY75145.1| hypothetical protein OsI_03039 [Oryza sativa Indi...   244   1e-62
ref|XP_003569438.1| PREDICTED: single-stranded DNA-binding prote...   239   4e-61
gb|AFK47808.1| unknown [Medicago truncatula]                          238   2e-60
ref|XP_003609082.1| Single-stranded DNA-binding protein [Medicag...   238   2e-60

>ref|NP_001043691.1| Os01g0642900 [Oryza sativa Japonica Group]
           gi|55297106|dbj|BAD68750.1| single-strand DNA binding
           protein-like [Oryza sativa Japonica Group]
           gi|113533222|dbj|BAF05605.1| Os01g0642900 [Oryza sativa
           Japonica Group] gi|125571356|gb|EAZ12871.1| hypothetical
           protein OsJ_02792 [Oryza sativa Japonica Group]
           gi|215686631|dbj|BAG88884.1| unnamed protein product
           [Oryza sativa Japonica Group]
           gi|215707058|dbj|BAG93518.1| unnamed protein product
           [Oryza sativa Japonica Group]
          Length = 224

 Score =  246 bits (627), Expect = 6e-63
 Identities = 120/176 (68%), Positives = 141/176 (80%), Gaps = 3/176 (1%)
 Frame = +3

Query: 102 PLPGDAEPLP---DDQPTSQQRLPFQRPLENGLDPGVYKAVMVGKVGQRPVQKHLKSGRS 272
           P P   +P P   D Q  ++ R    RPLENGLDPG+YKA+MVGKVGQ P+QK L+SGR+
Sbjct: 53  PDPEQQQPPPAGQDQQAAARPRAGDTRPLENGLDPGIYKAIMVGKVGQEPIQKRLRSGRT 112

Query: 273 VVLFSLGTGGIRNNRRPLDNEQPREYAERCAVQWHRVCVYPERLGDLALKHVNPGSVLYL 452
           VVLFSLGTGGIRNNRRPLD E+P +YAERC+VQWHRVC+YPERLG LALKHV  GSVLYL
Sbjct: 113 VVLFSLGTGGIRNNRRPLDREEPHQYAERCSVQWHRVCIYPERLGSLALKHVKTGSVLYL 172

Query: 453 EGNLETKVFSDPTTGLVRRIREIAIRRDGRLVFLGSETEAGQSQPQQADLRSVGYY 620
           EGNLETKVFSDP TGLVRRIREIA+R +GRL+FLG++  A    P+  + + VGY+
Sbjct: 173 EGNLETKVFSDPITGLVRRIREIAVRSNGRLLFLGNDCNA----PKLGEAKGVGYF 224


>gb|EAY75145.1| hypothetical protein OsI_03039 [Oryza sativa Indica Group]
          Length = 224

 Score =  244 bits (624), Expect = 1e-62
 Identities = 119/176 (67%), Positives = 141/176 (80%), Gaps = 3/176 (1%)
 Frame = +3

Query: 102 PLPGDAEPLP---DDQPTSQQRLPFQRPLENGLDPGVYKAVMVGKVGQRPVQKHLKSGRS 272
           P P   +P P   D Q  ++ R    RPLENGLDPG+YKA+MVGK+GQ P+QK L+SGR+
Sbjct: 53  PDPEQQQPPPAGQDQQAAARPRAGDTRPLENGLDPGIYKAIMVGKLGQEPIQKRLRSGRT 112

Query: 273 VVLFSLGTGGIRNNRRPLDNEQPREYAERCAVQWHRVCVYPERLGDLALKHVNPGSVLYL 452
           VVLFSLGTGGIRNNRRPLD E+P +YAERC+VQWHRVC+YPERLG LALKHV  GSVLYL
Sbjct: 113 VVLFSLGTGGIRNNRRPLDREEPHQYAERCSVQWHRVCIYPERLGSLALKHVKTGSVLYL 172

Query: 453 EGNLETKVFSDPTTGLVRRIREIAIRRDGRLVFLGSETEAGQSQPQQADLRSVGYY 620
           EGNLETKVFSDP TGLVRRIREIA+R +GRL+FLG++  A    P+  + + VGY+
Sbjct: 173 EGNLETKVFSDPITGLVRRIREIAVRSNGRLLFLGNDCNA----PKLGEAKGVGYF 224


>ref|XP_003569438.1| PREDICTED: single-stranded DNA-binding protein, mitochondrial-like
           [Brachypodium distachyon]
          Length = 214

 Score =  239 bits (611), Expect = 4e-61
 Identities = 120/177 (67%), Positives = 143/177 (80%), Gaps = 8/177 (4%)
 Frame = +3

Query: 114 DAEPLPD-------DQPTSQQRLP-FQRPLENGLDPGVYKAVMVGKVGQRPVQKHLKSGR 269
           DAEP PD       +QP +Q R P   RPLENGLDPG+YKA+MVGKVGQ P+QK L+SG+
Sbjct: 42  DAEPDPDHAPADEGNQPPNQHRAPNTTRPLENGLDPGIYKAIMVGKVGQEPMQKRLRSGK 101

Query: 270 SVVLFSLGTGGIRNNRRPLDNEQPREYAERCAVQWHRVCVYPERLGDLALKHVNPGSVLY 449
           +VVLFSLGTGGIRNNRRPLDNE+P +YA+R +VQWHRVCVYPERLG L LK+V  G+VLY
Sbjct: 102 TVVLFSLGTGGIRNNRRPLDNEEPHQYADRSSVQWHRVCVYPERLGSLTLKNVKIGTVLY 161

Query: 450 LEGNLETKVFSDPTTGLVRRIREIAIRRDGRLVFLGSETEAGQSQPQQADLRSVGYY 620
           LEGNLETKVFSDP TGLVRRIREIA+R +GRL+FLG +  A    P+  +++ VGY+
Sbjct: 162 LEGNLETKVFSDPITGLVRRIREIAVRANGRLLFLGEDGNA----PKIGEVKGVGYF 214


>gb|AFK47808.1| unknown [Medicago truncatula]
          Length = 239

 Score =  238 bits (606), Expect = 2e-60
 Identities = 115/164 (70%), Positives = 133/164 (81%)
 Frame = +3

Query: 129 PDDQPTSQQRLPFQRPLENGLDPGVYKAVMVGKVGQRPVQKHLKSGRSVVLFSLGTGGIR 308
           P   P   +R  F RPLENGLDPGVY+A++VGK GQ+P+QK LKSG  V L S+GTGGIR
Sbjct: 77  PSPSPEQTERTFFDRPLENGLDPGVYRAILVGKAGQKPLQKKLKSGTVVTLLSIGTGGIR 136

Query: 309 NNRRPLDNEQPREYAERCAVQWHRVCVYPERLGDLALKHVNPGSVLYLEGNLETKVFSDP 488
           NNRRPLD+E PREYA RCAVQWHRV VYPERLG+L +K V PGS LY+EGNLETKVFSDP
Sbjct: 137 NNRRPLDHENPREYANRCAVQWHRVTVYPERLGNLLMKTVLPGSTLYVEGNLETKVFSDP 196

Query: 489 TTGLVRRIREIAIRRDGRLVFLGSETEAGQSQPQQADLRSVGYY 620
            TGLVRR+RE+A+RR+GR+VFLG   +  Q Q QQ DLR+VGYY
Sbjct: 197 VTGLVRRVREVAVRRNGRVVFLGPGDDPKQ-QTQQNDLRAVGYY 239


>ref|XP_003609082.1| Single-stranded DNA-binding protein [Medicago truncatula]
           gi|355510137|gb|AES91279.1| Single-stranded DNA-binding
           protein [Medicago truncatula]
          Length = 239

 Score =  238 bits (606), Expect = 2e-60
 Identities = 115/164 (70%), Positives = 133/164 (81%)
 Frame = +3

Query: 129 PDDQPTSQQRLPFQRPLENGLDPGVYKAVMVGKVGQRPVQKHLKSGRSVVLFSLGTGGIR 308
           P   P   +R  F RPLENGLDPGVY+A++VGK GQ+P+QK LKSG  V L S+GTGGIR
Sbjct: 77  PSPSPEQTERTFFDRPLENGLDPGVYRAILVGKAGQKPLQKKLKSGTVVTLLSIGTGGIR 136

Query: 309 NNRRPLDNEQPREYAERCAVQWHRVCVYPERLGDLALKHVNPGSVLYLEGNLETKVFSDP 488
           NNRRPLD+E PREYA RCAVQWHRV VYPERLG+L +K V PGS LY+EGNLETKVFSDP
Sbjct: 137 NNRRPLDHENPREYANRCAVQWHRVTVYPERLGNLLMKTVLPGSTLYVEGNLETKVFSDP 196

Query: 489 TTGLVRRIREIAIRRDGRLVFLGSETEAGQSQPQQADLRSVGYY 620
            TGLVRR+RE+A+RR+GR+VFLG   +  Q Q QQ DLR+VGYY
Sbjct: 197 VTGLVRRVREVAVRRNGRVVFLGPGDDPKQ-QTQQNDLRAVGYY 239


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