BLASTX nr result

ID: Dioscorea21_contig00000922 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00000922
         (1307 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002272180.1| PREDICTED: mitochondrial outer membrane prot...   139   1e-36
emb|CAN64922.1| hypothetical protein VITISV_017201 [Vitis vinifera]   139   1e-36
ref|NP_001242891.1| uncharacterized protein LOC100790270 [Glycin...   139   3e-36
ref|NP_001048902.1| Os03g0137500 [Oryza sativa Japonica Group] g...   144   2e-35
gb|EEC74475.1| hypothetical protein OsI_09925 [Oryza sativa Indi...   144   3e-35

>ref|XP_002272180.1| PREDICTED: mitochondrial outer membrane protein porin of 36 kDa
           [Vitis vinifera] gi|297735387|emb|CBI17827.3| unnamed
           protein product [Vitis vinifera]
          Length = 277

 Score =  139 bits (351), Expect(2) = 1e-36
 Identities = 67/111 (60%), Positives = 81/111 (72%)
 Frame = +1

Query: 13  MGNGPAPFSDIGKKAKDLLTKDYNFDQKFTFAMXXXXXXXXXXXXVKMDEVFIGDINTQY 192
           MGNGPAPFSDIGKK +DLL KDYNFD KFT  M             K D++F GD++T Y
Sbjct: 1   MGNGPAPFSDIGKKTRDLLNKDYNFDHKFTLLMQSPGGMGVTATGWKKDQIFFGDVSTLY 60

Query: 193 KSGKTTVDVKVDTNSNVSTTVSFNEFVPGAKTSFSFKMPDQKSGKLDVQYL 345
           KSG TTVD+K+DT+SNVST V+ ++ +P  K + SFK+PD KSGKLDVQYL
Sbjct: 61  KSGNTTVDLKLDTHSNVSTKVTAHDILPCTKVACSFKIPDHKSGKLDVQYL 111



 Score = 41.2 bits (95), Expect(2) = 1e-36
 Identities = 22/38 (57%), Positives = 28/38 (73%)
 Frame = +2

Query: 431 SGLVR*AFLMCNTFITTSIGLTPTPLLELSAAIGSKEV 544
           SG +   +L  +  I +SIGL PTPLLELSAAIGSK++
Sbjct: 103 SGKLDVQYLHPHAAIDSSIGLNPTPLLELSAAIGSKDL 140


>emb|CAN64922.1| hypothetical protein VITISV_017201 [Vitis vinifera]
          Length = 277

 Score =  139 bits (351), Expect(2) = 1e-36
 Identities = 67/111 (60%), Positives = 81/111 (72%)
 Frame = +1

Query: 13  MGNGPAPFSDIGKKAKDLLTKDYNFDQKFTFAMXXXXXXXXXXXXVKMDEVFIGDINTQY 192
           MGNGPAPFSDIGKK +DLL KDYNFD KFT  M             K D++F GD++T Y
Sbjct: 1   MGNGPAPFSDIGKKTRDLLNKDYNFDHKFTLLMQSPGGMGVTATGWKKDQIFFGDVSTLY 60

Query: 193 KSGKTTVDVKVDTNSNVSTTVSFNEFVPGAKTSFSFKMPDQKSGKLDVQYL 345
           KSG TTVD+K+DT+SNVST V+ ++ +P  K + SFK+PD KSGKLDVQYL
Sbjct: 61  KSGNTTVDLKLDTHSNVSTKVTAHDILPCTKVACSFKIPDHKSGKLDVQYL 111



 Score = 41.2 bits (95), Expect(2) = 1e-36
 Identities = 22/38 (57%), Positives = 28/38 (73%)
 Frame = +2

Query: 431 SGLVR*AFLMCNTFITTSIGLTPTPLLELSAAIGSKEV 544
           SG +   +L  +  I +SIGL PTPLLELSAAIGSK++
Sbjct: 103 SGKLDVQYLHPHAAIDSSIGLNPTPLLELSAAIGSKDL 140


>ref|NP_001242891.1| uncharacterized protein LOC100790270 [Glycine max]
           gi|255635086|gb|ACU17901.1| unknown [Glycine max]
          Length = 277

 Score =  139 bits (350), Expect(2) = 3e-36
 Identities = 66/111 (59%), Positives = 82/111 (73%)
 Frame = +1

Query: 13  MGNGPAPFSDIGKKAKDLLTKDYNFDQKFTFAMXXXXXXXXXXXXVKMDEVFIGDINTQY 192
           M NGPAPFS+IGK+AKDLL KDYNFD KF+ ++            +K D++F+GDI+T Y
Sbjct: 1   MANGPAPFSEIGKRAKDLLYKDYNFDHKFSLSIPNSTGLGLIATGLKKDQIFVGDISTLY 60

Query: 193 KSGKTTVDVKVDTNSNVSTTVSFNEFVPGAKTSFSFKMPDQKSGKLDVQYL 345
           KSG TTVDVKVDT SN+ST V+ N+ + G K + SF +PD KSGKLDVQYL
Sbjct: 61  KSGNTTVDVKVDTYSNISTKVTVNDILHGTKAALSFNIPDHKSGKLDVQYL 111



 Score = 40.4 bits (93), Expect(2) = 3e-36
 Identities = 21/38 (55%), Positives = 28/38 (73%)
 Frame = +2

Query: 431 SGLVR*AFLMCNTFITTSIGLTPTPLLELSAAIGSKEV 544
           SG +   +L  +  + +SIGL P+PLLELSAAIGSK+V
Sbjct: 103 SGKLDVQYLHPHAAVDSSIGLNPSPLLELSAAIGSKDV 140


>ref|NP_001048902.1| Os03g0137500 [Oryza sativa Japonica Group]
           gi|122247550|sp|Q10S27.1|VDAC6_ORYSJ RecName:
           Full=Mitochondrial outer membrane protein porin 6;
           AltName: Full=Voltage-dependent anion-selective channel
           protein 6; Short=OsVDAC6 gi|108706073|gb|ABF93868.1|
           Eukaryotic porin family protein, expressed [Oryza sativa
           Japonica Group] gi|113547373|dbj|BAF10816.1|
           Os03g0137500 [Oryza sativa Japonica Group]
           gi|215765648|dbj|BAG87345.1| unnamed protein product
           [Oryza sativa Japonica Group]
          Length = 276

 Score =  144 bits (364), Expect(2) = 2e-35
 Identities = 71/111 (63%), Positives = 85/111 (76%)
 Frame = +1

Query: 13  MGNGPAPFSDIGKKAKDLLTKDYNFDQKFTFAMXXXXXXXXXXXXVKMDEVFIGDINTQY 192
           M  GPAPF +IGK+AKDLL KDYNFDQKF+               VK+DE+FIGDI TQ+
Sbjct: 1   MSKGPAPFLNIGKRAKDLLYKDYNFDQKFSLTTTSNSGLGLTATGVKIDELFIGDIQTQH 60

Query: 193 KSGKTTVDVKVDTNSNVSTTVSFNEFVPGAKTSFSFKMPDQKSGKLDVQYL 345
           KSGKTTVDVK+D+ S VSTTV+ +E + G KTSFSF++PDQKSGKLD+QYL
Sbjct: 61  KSGKTTVDVKIDSESRVSTTVTVDEALTGLKTSFSFRVPDQKSGKLDLQYL 111



 Score = 32.3 bits (72), Expect(2) = 2e-35
 Identities = 16/38 (42%), Positives = 26/38 (68%)
 Frame = +2

Query: 431 SGLVR*AFLMCNTFITTSIGLTPTPLLELSAAIGSKEV 544
           SG +   +L  +  + ++IGLT TPL+EL+A IG+ E+
Sbjct: 103 SGKLDLQYLHDHFALNSTIGLTSTPLIELAATIGTNEL 140


>gb|EEC74475.1| hypothetical protein OsI_09925 [Oryza sativa Indica Group]
          Length = 276

 Score =  144 bits (364), Expect(2) = 3e-35
 Identities = 71/111 (63%), Positives = 85/111 (76%)
 Frame = +1

Query: 13  MGNGPAPFSDIGKKAKDLLTKDYNFDQKFTFAMXXXXXXXXXXXXVKMDEVFIGDINTQY 192
           M  GPAPF +IGK+AKDLL KDYNFDQKF+               VK+DE+FIGDI TQ+
Sbjct: 1   MSKGPAPFLNIGKRAKDLLYKDYNFDQKFSLTTTSNSGLGLTATGVKIDELFIGDIQTQH 60

Query: 193 KSGKTTVDVKVDTNSNVSTTVSFNEFVPGAKTSFSFKMPDQKSGKLDVQYL 345
           KSGKTTVDVK+D+ S VSTTV+ +E + G KTSFSF++PDQKSGKLD+QYL
Sbjct: 61  KSGKTTVDVKIDSESRVSTTVTVDEALTGLKTSFSFRVPDQKSGKLDLQYL 111



 Score = 31.6 bits (70), Expect(2) = 3e-35
 Identities = 16/38 (42%), Positives = 25/38 (65%)
 Frame = +2

Query: 431 SGLVR*AFLMCNTFITTSIGLTPTPLLELSAAIGSKEV 544
           SG +   +L  +  + ++IGLT TPL+EL+A IG  E+
Sbjct: 103 SGKLDLQYLHDHFALNSTIGLTSTPLIELAATIGMNEL 140


Top