BLASTX nr result

ID: Dioscorea21_contig00000916 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00000916
         (1707 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002889406.1| hypothetical protein ARALYDRAFT_887394 [Arab...   443   e-122
ref|NP_001242516.1| uncharacterized protein LOC100798621 [Glycin...   443   e-122
ref|NP_563657.1| ATP-dependent Clp protease, protease subunit [A...   442   e-121
ref|XP_002277104.1| PREDICTED: ATP-dependent Clp protease proteo...   441   e-121
ref|XP_003535918.1| PREDICTED: ATP-dependent Clp protease proteo...   440   e-121

>ref|XP_002889406.1| hypothetical protein ARALYDRAFT_887394 [Arabidopsis lyrata subsp.
           lyrata] gi|297335248|gb|EFH65665.1| hypothetical protein
           ARALYDRAFT_887394 [Arabidopsis lyrata subsp. lyrata]
          Length = 298

 Score =  443 bits (1140), Expect = e-122
 Identities = 220/240 (91%), Positives = 227/240 (94%)
 Frame = +3

Query: 189 SAPKAVYSGGVWTPQRVERQEIWSIRQDLEVPSSPYFPVEAQGGQGPPPMVMERFQSVIS 368
           S PKAVYSG +WTP+    Q +WSIR DL+VPSSPYFPV AQG QGPPPMV ERFQS+IS
Sbjct: 59  STPKAVYSGNLWTPEIPSPQGVWSIRDDLQVPSSPYFPVYAQG-QGPPPMVQERFQSIIS 117

Query: 369 QLFQHRIIRCGGAVDDDMANIIVAQLLYLDAIDPNKDIVMYVNSPGGSVTAGMAIFDTMR 548
           QLFQ+RIIRCGGAVDDDMANIIVAQLLYLDA+DP KDIVMYVNSPGGSVTAGMAIFDTMR
Sbjct: 118 QLFQYRIIRCGGAVDDDMANIIVAQLLYLDAVDPTKDIVMYVNSPGGSVTAGMAIFDTMR 177

Query: 549 HIRPDVSTVCVGLAASMGAFLLSAGTKGKRYSLPNSRIMIHQPLGGAQGGQTDIDIQANE 728
           HIRPDVSTVCVGLAASMGAFLLSAGTKGKRYSLPNSRIMIHQPLGGAQGGQTDIDIQANE
Sbjct: 178 HIRPDVSTVCVGLAASMGAFLLSAGTKGKRYSLPNSRIMIHQPLGGAQGGQTDIDIQANE 237

Query: 729 MLHHKANLNGYLAYHTGQSLEKINQDTDRDFFMSAKEAKEYGLIDGVIMNPLKALQPLPA 908
           MLHHKANLNGYLAYHTGQSLEKINQDTDRDFFMSAKEAKEYGLIDGVIMNPLKALQPL A
Sbjct: 238 MLHHKANLNGYLAYHTGQSLEKINQDTDRDFFMSAKEAKEYGLIDGVIMNPLKALQPLAA 297


>ref|NP_001242516.1| uncharacterized protein LOC100798621 [Glycine max]
           gi|255645951|gb|ACU23464.1| unknown [Glycine max]
          Length = 304

 Score =  443 bits (1139), Expect = e-122
 Identities = 229/275 (83%), Positives = 239/275 (86%), Gaps = 1/275 (0%)
 Frame = +3

Query: 96  PNKTHLLSSNRSLVAASFSSSKKFE-RLSCAWSAPKAVYSGGVWTPQRVERQEIWSIRQD 272
           P+ +   S+N S  A S +  K  E R     SA KAVY    WTP+R  R  IWSIR D
Sbjct: 24  PSSSSSRSNNLSFPALSRNLRKSVEDRKINKKSAVKAVYGDEFWTPERSSRPGIWSIRSD 83

Query: 273 LEVPSSPYFPVEAQGGQGPPPMVMERFQSVISQLFQHRIIRCGGAVDDDMANIIVAQLLY 452
           L+VPSSPYFP  AQG QGPPPMV ERFQSVISQLFQ+RIIRCGGAVDDDMANIIVAQLLY
Sbjct: 84  LQVPSSPYFPTYAQG-QGPPPMVAERFQSVISQLFQYRIIRCGGAVDDDMANIIVAQLLY 142

Query: 453 LDAIDPNKDIVMYVNSPGGSVTAGMAIFDTMRHIRPDVSTVCVGLAASMGAFLLSAGTKG 632
           LDA+DPNKDIVMYVNSPGGSVTAGMAIFDTMRHIRPDVSTVCVGLAASMGAFLLSAGTKG
Sbjct: 143 LDAVDPNKDIVMYVNSPGGSVTAGMAIFDTMRHIRPDVSTVCVGLAASMGAFLLSAGTKG 202

Query: 633 KRYSLPNSRIMIHQPLGGAQGGQTDIDIQANEMLHHKANLNGYLAYHTGQSLEKINQDTD 812
           KRYSLPNSRIMIHQPLGGAQGGQTDIDIQANEMLHHKANLNGYLAYHTGQSL+KINQDTD
Sbjct: 203 KRYSLPNSRIMIHQPLGGAQGGQTDIDIQANEMLHHKANLNGYLAYHTGQSLDKINQDTD 262

Query: 813 RDFFMSAKEAKEYGLIDGVIMNPLKALQPLPATTD 917
           RDFFMSAKEAKEYGLIDGVIMNPLKALQPL A  +
Sbjct: 263 RDFFMSAKEAKEYGLIDGVIMNPLKALQPLEAAAE 297


>ref|NP_563657.1| ATP-dependent Clp protease, protease subunit [Arabidopsis thaliana]
           gi|75313059|sp|Q9S834.1|CLPP5_ARATH RecName:
           Full=ATP-dependent Clp protease proteolytic subunit 5,
           chloroplastic; AltName: Full=Endopeptidase ClpP5;
           Short=nClpP5; AltName: Full=nClpP1; Flags: Precursor
           gi|9972387|gb|AAG10637.1|AC022521_15 ATP-dependent Clp
           protease subunit ClpP [Arabidopsis thaliana]
           gi|4887543|emb|CAB43488.1| ATP-dependent Clp protease
           subunit ClpP [Arabidopsis thaliana]
           gi|5360579|dbj|BAA82065.1| nClpP1 [Arabidopsis thaliana]
           gi|21536639|gb|AAM60971.1| ATP-dependent Clp protease
           proteolytic subunit ClpP5 [Arabidopsis thaliana]
           gi|89274139|gb|ABD65590.1| At1g02560 [Arabidopsis
           thaliana] gi|332189323|gb|AEE27444.1| ATP-dependent Clp
           protease, protease subunit [Arabidopsis thaliana]
          Length = 298

 Score =  442 bits (1136), Expect = e-121
 Identities = 219/240 (91%), Positives = 226/240 (94%)
 Frame = +3

Query: 189 SAPKAVYSGGVWTPQRVERQEIWSIRQDLEVPSSPYFPVEAQGGQGPPPMVMERFQSVIS 368
           S PKAVYSG +WTP+    Q +WSIR DL+VPSSPYFP  AQG QGPPPMV ERFQS+IS
Sbjct: 59  STPKAVYSGNLWTPEIPSPQGVWSIRDDLQVPSSPYFPAYAQG-QGPPPMVQERFQSIIS 117

Query: 369 QLFQHRIIRCGGAVDDDMANIIVAQLLYLDAIDPNKDIVMYVNSPGGSVTAGMAIFDTMR 548
           QLFQ+RIIRCGGAVDDDMANIIVAQLLYLDA+DP KDIVMYVNSPGGSVTAGMAIFDTMR
Sbjct: 118 QLFQYRIIRCGGAVDDDMANIIVAQLLYLDAVDPTKDIVMYVNSPGGSVTAGMAIFDTMR 177

Query: 549 HIRPDVSTVCVGLAASMGAFLLSAGTKGKRYSLPNSRIMIHQPLGGAQGGQTDIDIQANE 728
           HIRPDVSTVCVGLAASMGAFLLSAGTKGKRYSLPNSRIMIHQPLGGAQGGQTDIDIQANE
Sbjct: 178 HIRPDVSTVCVGLAASMGAFLLSAGTKGKRYSLPNSRIMIHQPLGGAQGGQTDIDIQANE 237

Query: 729 MLHHKANLNGYLAYHTGQSLEKINQDTDRDFFMSAKEAKEYGLIDGVIMNPLKALQPLPA 908
           MLHHKANLNGYLAYHTGQSLEKINQDTDRDFFMSAKEAKEYGLIDGVIMNPLKALQPL A
Sbjct: 238 MLHHKANLNGYLAYHTGQSLEKINQDTDRDFFMSAKEAKEYGLIDGVIMNPLKALQPLAA 297


>ref|XP_002277104.1| PREDICTED: ATP-dependent Clp protease proteolytic subunit 5,
           chloroplastic isoform 1 [Vitis vinifera]
           gi|297743987|emb|CBI36957.3| unnamed protein product
           [Vitis vinifera]
          Length = 289

 Score =  441 bits (1134), Expect = e-121
 Identities = 221/261 (84%), Positives = 234/261 (89%), Gaps = 5/261 (1%)
 Frame = +3

Query: 153 SSKKFERLSCAWS----AP-KAVYSGGVWTPQRVERQEIWSIRQDLEVPSSPYFPVEAQG 317
           SS+KF +L  +      AP KA YSG  W P +  RQ  WSIR DL++PSS YFP  AQG
Sbjct: 29  SSRKFTKLVGSEKRLRVAPVKAAYSGEFWAPDKNSRQGTWSIRDDLQIPSSAYFPTYAQG 88

Query: 318 GQGPPPMVMERFQSVISQLFQHRIIRCGGAVDDDMANIIVAQLLYLDAIDPNKDIVMYVN 497
           GQGPPPMV ERFQSV+SQLFQHRIIRCGGAVDDDMANIIVAQLLYLDA+DP+KDIVMYVN
Sbjct: 89  GQGPPPMVQERFQSVVSQLFQHRIIRCGGAVDDDMANIIVAQLLYLDAVDPDKDIVMYVN 148

Query: 498 SPGGSVTAGMAIFDTMRHIRPDVSTVCVGLAASMGAFLLSAGTKGKRYSLPNSRIMIHQP 677
           SPGGSVTAGMAIFDTMRHIRPDVSTVCVGLAASMGAFLLS GTKGKRYSLPNSRIMIHQP
Sbjct: 149 SPGGSVTAGMAIFDTMRHIRPDVSTVCVGLAASMGAFLLSCGTKGKRYSLPNSRIMIHQP 208

Query: 678 LGGAQGGQTDIDIQANEMLHHKANLNGYLAYHTGQSLEKINQDTDRDFFMSAKEAKEYGL 857
           LGGAQGGQTDIDIQANEMLHHKANLNGYL+YHTGQSLEKINQDTDRDFFMSAKEAKEYGL
Sbjct: 209 LGGAQGGQTDIDIQANEMLHHKANLNGYLSYHTGQSLEKINQDTDRDFFMSAKEAKEYGL 268

Query: 858 IDGVIMNPLKALQPLPATTDE 920
           IDGVI+NPLKAL+PL AT D+
Sbjct: 269 IDGVILNPLKALKPLVATADQ 289


>ref|XP_003535918.1| PREDICTED: ATP-dependent Clp protease proteolytic subunit 5,
           chloroplastic-like isoform 1 [Glycine max]
          Length = 303

 Score =  440 bits (1131), Expect = e-121
 Identities = 220/243 (90%), Positives = 226/243 (93%)
 Frame = +3

Query: 189 SAPKAVYSGGVWTPQRVERQEIWSIRQDLEVPSSPYFPVEAQGGQGPPPMVMERFQSVIS 368
           SA KAVY    WTP R   Q+IWSIR DL+VPSSPYFP  AQG QGPPPMV ERFQSVIS
Sbjct: 55  SAVKAVYGDEFWTPARSSPQDIWSIRSDLQVPSSPYFPTYAQG-QGPPPMVAERFQSVIS 113

Query: 369 QLFQHRIIRCGGAVDDDMANIIVAQLLYLDAIDPNKDIVMYVNSPGGSVTAGMAIFDTMR 548
           QLFQ+RIIRCGGAVDDDMANIIVAQLLYLDA+DPNKDIVMYVNSPGGSVTAGMAIFDTMR
Sbjct: 114 QLFQYRIIRCGGAVDDDMANIIVAQLLYLDAVDPNKDIVMYVNSPGGSVTAGMAIFDTMR 173

Query: 549 HIRPDVSTVCVGLAASMGAFLLSAGTKGKRYSLPNSRIMIHQPLGGAQGGQTDIDIQANE 728
           HIRPDVSTVCVGLAASMGAFLLSAGTKGKRYSLPNSRIMIHQPLGGAQGGQTDIDIQANE
Sbjct: 174 HIRPDVSTVCVGLAASMGAFLLSAGTKGKRYSLPNSRIMIHQPLGGAQGGQTDIDIQANE 233

Query: 729 MLHHKANLNGYLAYHTGQSLEKINQDTDRDFFMSAKEAKEYGLIDGVIMNPLKALQPLPA 908
           MLHHKANLNGYLAYHTGQSL+KINQDTDRDFFMSAKEAKEYGLIDGVIMNPLKALQPL A
Sbjct: 234 MLHHKANLNGYLAYHTGQSLDKINQDTDRDFFMSAKEAKEYGLIDGVIMNPLKALQPLEA 293

Query: 909 TTD 917
             +
Sbjct: 294 AAE 296


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