BLASTX nr result

ID: Dioscorea21_contig00000906 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00000906
         (1588 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004137800.1| PREDICTED: 60S ribosomal protein L4-like [Cu...   612   e-172
ref|XP_002285741.1| PREDICTED: 60S ribosomal protein L4-1 [Vitis...   609   e-172
ref|XP_004142108.1| PREDICTED: 60S ribosomal protein L4-like [Cu...   607   e-171
ref|XP_002274975.1| PREDICTED: 60S ribosomal protein L4 [Vitis v...   607   e-171
ref|XP_003537248.1| PREDICTED: 60S ribosomal protein L4-1-like i...   597   e-168

>ref|XP_004137800.1| PREDICTED: 60S ribosomal protein L4-like [Cucumis sativus]
            gi|449519122|ref|XP_004166584.1| PREDICTED: 60S ribosomal
            protein L4-like [Cucumis sativus]
          Length = 405

 Score =  612 bits (1577), Expect = e-172
 Identities = 302/398 (75%), Positives = 339/398 (85%), Gaps = 1/398 (0%)
 Frame = +3

Query: 75   LVSVQALEGDMATDGN-SVPLPDVLKAPIRPDVVRFVHAGLSRNKRQPYAVSKRAGHQTS 251
            LV+VQ LEGDMATD + +VPLPDV+KA IRPD+V FVH+ +S+N RQPYAVSKRAGHQTS
Sbjct: 8    LVAVQVLEGDMATDSSPTVPLPDVMKASIRPDIVSFVHSNISKNSRQPYAVSKRAGHQTS 67

Query: 252  AESWGTGRAVSRIPRVPGGGTHRAGQGAFGNMCRGGRMFAPTKIWRRWHRRVNIAQXXXX 431
            AESWGTGRAVSRIPRVPGGGTHRAGQGAFGNMCRGGRMFAPTKIWRRWHR++N+ Q    
Sbjct: 68   AESWGTGRAVSRIPRVPGGGTHRAGQGAFGNMCRGGRMFAPTKIWRRWHRKINVNQKRYA 127

Query: 432  XXXXXXXXXXXXXXXXXGHRIEAVPELPLVISDSTESIEKTSSALKILKQIGASADAERA 611
                             GHRIE+VPELPLVISDS E IEKTSSA+K+LKQ+GA  DAE+A
Sbjct: 128  VVSAIAASAIPSLVLARGHRIESVPELPLVISDSAEGIEKTSSAIKVLKQVGALPDAEKA 187

Query: 612  KDSHAIRAGKGKMRNRRYVTRKGPLIVYGTEGSKIVKAFRNIPGVDVANVERLNLLKLAP 791
            KDSHAIR GKGKMRNRRY++RKGPLIVYGTEG+K+VKAFRNIPG+D+ NVERLNLLKLAP
Sbjct: 188  KDSHAIRTGKGKMRNRRYISRKGPLIVYGTEGAKLVKAFRNIPGIDIVNVERLNLLKLAP 247

Query: 792  GGHVGRFIIWTKSAFEKLDSVFGTFDKTSEKKKGWVLPRPKMANADLGRIINSDEVQSVV 971
            GGH+GRF+IWTK+AFEKLDS++G+F+K+SEKKKG+VLPR KM NADL RIINSDEVQSVV
Sbjct: 248  GGHLGRFVIWTKTAFEKLDSIYGSFEKSSEKKKGYVLPRSKMVNADLARIINSDEVQSVV 307

Query: 972  RPIDKTVKRRSLKKNPLKNLNAMLKLNPYAKTARRMALLAEAQRVKAKKEKLDKKRTQLP 1151
            +PI K VKR SLKKNPLKNLNAMLKLNPYAKTARRM+LLAEAQRVKAKKEKLDKKR  +P
Sbjct: 308  KPIKKGVKRPSLKKNPLKNLNAMLKLNPYAKTARRMSLLAEAQRVKAKKEKLDKKRGIIP 367

Query: 1152 XXXXXXXXXXXXXXXXTMISDSDYTEFENFTKWLGVTQ 1265
                            TMISDSDYTEF+NF+KWLGV+Q
Sbjct: 368  KEDAAAVKAAGKAWYQTMISDSDYTEFDNFSKWLGVSQ 405


>ref|XP_002285741.1| PREDICTED: 60S ribosomal protein L4-1 [Vitis vinifera]
          Length = 405

 Score =  609 bits (1571), Expect = e-172
 Identities = 301/398 (75%), Positives = 336/398 (84%), Gaps = 1/398 (0%)
 Frame = +3

Query: 75   LVSVQALEGDMATDG-NSVPLPDVLKAPIRPDVVRFVHAGLSRNKRQPYAVSKRAGHQTS 251
            LV+VQ L+ DMATDG N+VPLPDV+KA IRPD+V FVH+ +S+N RQPYAVS+RAGHQTS
Sbjct: 8    LVTVQVLKSDMATDGGNAVPLPDVMKASIRPDIVNFVHSNISKNSRQPYAVSRRAGHQTS 67

Query: 252  AESWGTGRAVSRIPRVPGGGTHRAGQGAFGNMCRGGRMFAPTKIWRRWHRRVNIAQXXXX 431
            AESWGTGRAVSRIPRVPGGGTHRAGQGAFGNMCRGGRMFAPTKIWRRWHR++N+ Q    
Sbjct: 68   AESWGTGRAVSRIPRVPGGGTHRAGQGAFGNMCRGGRMFAPTKIWRRWHRKINVNQKRYA 127

Query: 432  XXXXXXXXXXXXXXXXXGHRIEAVPELPLVISDSTESIEKTSSALKILKQIGASADAERA 611
                             GHRIE+VPELPLVI DS ES+EKTS+A+ ILKQ+GA  DAE+A
Sbjct: 128  VVSAIAASAVPSLVMARGHRIESVPELPLVIGDSAESVEKTSAAIDILKQVGAYPDAEKA 187

Query: 612  KDSHAIRAGKGKMRNRRYVTRKGPLIVYGTEGSKIVKAFRNIPGVDVANVERLNLLKLAP 791
            KDSH IR GKGKMRNRRY++RKGPLIVYGTEG+K+VKAFRNIPGV+VANVERLNLLKLAP
Sbjct: 188  KDSHGIRPGKGKMRNRRYISRKGPLIVYGTEGAKLVKAFRNIPGVEVANVERLNLLKLAP 247

Query: 792  GGHVGRFIIWTKSAFEKLDSVFGTFDKTSEKKKGWVLPRPKMANADLGRIINSDEVQSVV 971
            GGH+GRFIIWTKSA EK+DS++G+FDKTSEKKKG++LPR KM NADL RIINSDEVQSVV
Sbjct: 248  GGHLGRFIIWTKSAIEKVDSIYGSFDKTSEKKKGYLLPRAKMVNADLARIINSDEVQSVV 307

Query: 972  RPIDKTVKRRSLKKNPLKNLNAMLKLNPYAKTARRMALLAEAQRVKAKKEKLDKKRTQLP 1151
            RPI K VKR  +KKNPLKNLN MLKLNPYAKTARRMALLAEAQRVKAKKEKLDKKR Q+P
Sbjct: 308  RPIKKEVKRAPMKKNPLKNLNTMLKLNPYAKTARRMALLAEAQRVKAKKEKLDKKRAQIP 367

Query: 1152 XXXXXXXXXXXXXXXXTMISDSDYTEFENFTKWLGVTQ 1265
                            TMISDSDYTEF+NF+KWLGV+Q
Sbjct: 368  KEEAAAIKAAGKAWYQTMISDSDYTEFDNFSKWLGVSQ 405


>ref|XP_004142108.1| PREDICTED: 60S ribosomal protein L4-like [Cucumis sativus]
            gi|449520008|ref|XP_004167026.1| PREDICTED: 60S ribosomal
            protein L4-like [Cucumis sativus]
          Length = 405

 Score =  607 bits (1566), Expect = e-171
 Identities = 301/398 (75%), Positives = 335/398 (84%), Gaps = 1/398 (0%)
 Frame = +3

Query: 75   LVSVQALEGDMATDGN-SVPLPDVLKAPIRPDVVRFVHAGLSRNKRQPYAVSKRAGHQTS 251
            LVSVQ+LEGDMATD   +VPLPDV+KA IRPD+V FVH+ +S+N RQPYAVSKRAGHQTS
Sbjct: 8    LVSVQSLEGDMATDAAPTVPLPDVMKASIRPDIVSFVHSNISKNSRQPYAVSKRAGHQTS 67

Query: 252  AESWGTGRAVSRIPRVPGGGTHRAGQGAFGNMCRGGRMFAPTKIWRRWHRRVNIAQXXXX 431
            AESWGTGRAVSRIPRVPGGGTHRAGQGAFGNMCRGGRMFAPTKIWRRWHR++N+ Q    
Sbjct: 68   AESWGTGRAVSRIPRVPGGGTHRAGQGAFGNMCRGGRMFAPTKIWRRWHRKINVNQKRYA 127

Query: 432  XXXXXXXXXXXXXXXXXGHRIEAVPELPLVISDSTESIEKTSSALKILKQIGASADAERA 611
                             GHRIE VPELPLV+SDS E +EKTS+A+K+LKQ+GA  DAE+A
Sbjct: 128  VVSAIAASAVPSLVLARGHRIETVPELPLVVSDSAEGVEKTSAAIKVLKQVGAFPDAEKA 187

Query: 612  KDSHAIRAGKGKMRNRRYVTRKGPLIVYGTEGSKIVKAFRNIPGVDVANVERLNLLKLAP 791
            KDSHAIR GKGKMRNRRY++RKGPLIVYGTEG+K+VKAFRNIPGV++ANVERLNLLKLAP
Sbjct: 188  KDSHAIRPGKGKMRNRRYISRKGPLIVYGTEGAKLVKAFRNIPGVEIANVERLNLLKLAP 247

Query: 792  GGHVGRFIIWTKSAFEKLDSVFGTFDKTSEKKKGWVLPRPKMANADLGRIINSDEVQSVV 971
            GGH+GRF+IWTKSAFEKLDS++G+F+K+SEKKKG+VLPR KM NADL RIINSDEVQSVV
Sbjct: 248  GGHLGRFVIWTKSAFEKLDSIYGSFEKSSEKKKGYVLPRSKMVNADLSRIINSDEVQSVV 307

Query: 972  RPIDKTVKRRSLKKNPLKNLNAMLKLNPYAKTARRMALLAEAQRVKAKKEKLDKKRTQLP 1151
            +PI K VKR  LKKNPLKNLNAMLKLNPYAKTARRMALLAE QRVKAKKEKLDKKR    
Sbjct: 308  KPIKKNVKRPQLKKNPLKNLNAMLKLNPYAKTARRMALLAEEQRVKAKKEKLDKKRNLTT 367

Query: 1152 XXXXXXXXXXXXXXXXTMISDSDYTEFENFTKWLGVTQ 1265
                            TMISDSDYTEFENF+KWLGV+Q
Sbjct: 368  KEDATAIRAAGKAWYQTMISDSDYTEFENFSKWLGVSQ 405


>ref|XP_002274975.1| PREDICTED: 60S ribosomal protein L4 [Vitis vinifera]
          Length = 406

 Score =  607 bits (1565), Expect = e-171
 Identities = 299/398 (75%), Positives = 337/398 (84%), Gaps = 1/398 (0%)
 Frame = +3

Query: 75   LVSVQALEGDMATDG-NSVPLPDVLKAPIRPDVVRFVHAGLSRNKRQPYAVSKRAGHQTS 251
            LV+VQ L+ DMATDG N+VPLPDV+KA IRPD+V FVH+ +S+N RQPYAVS+RAGHQTS
Sbjct: 9    LVTVQVLKSDMATDGGNAVPLPDVMKASIRPDIVTFVHSNISKNSRQPYAVSRRAGHQTS 68

Query: 252  AESWGTGRAVSRIPRVPGGGTHRAGQGAFGNMCRGGRMFAPTKIWRRWHRRVNIAQXXXX 431
            AESWGTGRAVSRIPRVPGGGTHRAGQGAFGNMCRGGRMFAPTKIWRRWHR++N+ Q    
Sbjct: 69   AESWGTGRAVSRIPRVPGGGTHRAGQGAFGNMCRGGRMFAPTKIWRRWHRKINVNQKRYA 128

Query: 432  XXXXXXXXXXXXXXXXXGHRIEAVPELPLVISDSTESIEKTSSALKILKQIGASADAERA 611
                             GHRIE+VPELPLVI DS ES+EKTS+A+ ILKQ+GA  DAE+A
Sbjct: 129  VVSAIAASAIPSLVMARGHRIESVPELPLVIGDSAESVEKTSAAIDILKQVGAYPDAEKA 188

Query: 612  KDSHAIRAGKGKMRNRRYVTRKGPLIVYGTEGSKIVKAFRNIPGVDVANVERLNLLKLAP 791
            KDSHAIR GKGKMRNRRY++RKGPLIVYGTEG+K+VKAFRNIPGV+VANV+RLNLLKLAP
Sbjct: 189  KDSHAIRPGKGKMRNRRYISRKGPLIVYGTEGAKLVKAFRNIPGVEVANVDRLNLLKLAP 248

Query: 792  GGHVGRFIIWTKSAFEKLDSVFGTFDKTSEKKKGWVLPRPKMANADLGRIINSDEVQSVV 971
            GGH+GRF+IWTKSAFEKLDS++G+F+KTSEKK G++LPR KM NADL RIINSDEVQSVV
Sbjct: 249  GGHLGRFVIWTKSAFEKLDSIYGSFEKTSEKKNGYLLPRSKMVNADLARIINSDEVQSVV 308

Query: 972  RPIDKTVKRRSLKKNPLKNLNAMLKLNPYAKTARRMALLAEAQRVKAKKEKLDKKRTQLP 1151
            RPI K VKR  +KKNPLKNLN MLKLNPYAKTARRMALLAEAQRVKAK+EKLDKKR Q+P
Sbjct: 309  RPIKKEVKRAPMKKNPLKNLNTMLKLNPYAKTARRMALLAEAQRVKAKQEKLDKKRKQIP 368

Query: 1152 XXXXXXXXXXXXXXXXTMISDSDYTEFENFTKWLGVTQ 1265
                            TMISDSDYTEF+NF+KWLGV+Q
Sbjct: 369  KEEVAAIKAAGKAWYQTMISDSDYTEFDNFSKWLGVSQ 406


>ref|XP_003537248.1| PREDICTED: 60S ribosomal protein L4-1-like isoform 1 [Glycine max]
          Length = 405

 Score =  597 bits (1538), Expect = e-168
 Identities = 290/398 (72%), Positives = 336/398 (84%), Gaps = 1/398 (0%)
 Frame = +3

Query: 75   LVSVQALEGDMATDGNS-VPLPDVLKAPIRPDVVRFVHAGLSRNKRQPYAVSKRAGHQTS 251
            LV+VQAL+ DMATD ++ VP+PDV+K+ IRPD+V FVH+ +S+N RQPYAVS+RAGHQTS
Sbjct: 8    LVTVQALDSDMATDASATVPIPDVMKSSIRPDIVNFVHSNISKNSRQPYAVSRRAGHQTS 67

Query: 252  AESWGTGRAVSRIPRVPGGGTHRAGQGAFGNMCRGGRMFAPTKIWRRWHRRVNIAQXXXX 431
            AESWGTGRAVSRIPRVPGGGTHRAGQGAFGNMCRGGRMFAPTKIWRRWHR++N+ Q    
Sbjct: 68   AESWGTGRAVSRIPRVPGGGTHRAGQGAFGNMCRGGRMFAPTKIWRRWHRKINVNQKRYA 127

Query: 432  XXXXXXXXXXXXXXXXXGHRIEAVPELPLVISDSTESIEKTSSALKILKQIGASADAERA 611
                             GHRIE+VPELPLV+SDS ES+EKT  A+K+LKQIGA  DAE+A
Sbjct: 128  VVSAIAASAIPSLVLARGHRIESVPELPLVVSDSAESVEKTKEAIKVLKQIGAFPDAEKA 187

Query: 612  KDSHAIRAGKGKMRNRRYVTRKGPLIVYGTEGSKIVKAFRNIPGVDVANVERLNLLKLAP 791
            KDS +IR GKGKMRNRRY++R+GPLIVYGTEG+K VKAFRN+PGV+VANVERLNLLKLAP
Sbjct: 188  KDSRSIRPGKGKMRNRRYISRRGPLIVYGTEGAKAVKAFRNVPGVEVANVERLNLLKLAP 247

Query: 792  GGHVGRFIIWTKSAFEKLDSVFGTFDKTSEKKKGWVLPRPKMANADLGRIINSDEVQSVV 971
            GGH+GRF++WTKSAFEKLDS++G+FDK SEKKKG++LPRPKM N+DL RIINSDEVQSVV
Sbjct: 248  GGHLGRFVVWTKSAFEKLDSIYGSFDKPSEKKKGYLLPRPKMVNSDLARIINSDEVQSVV 307

Query: 972  RPIDKTVKRRSLKKNPLKNLNAMLKLNPYAKTARRMALLAEAQRVKAKKEKLDKKRTQLP 1151
            RPI K VK+ +LKKNPLKNLN+MLKLNPYAKTA+RMALLAEAQRVKAKKEKLDKKR  + 
Sbjct: 308  RPIKKDVKKATLKKNPLKNLNSMLKLNPYAKTAKRMALLAEAQRVKAKKEKLDKKRKTVS 367

Query: 1152 XXXXXXXXXXXXXXXXTMISDSDYTEFENFTKWLGVTQ 1265
                            TM+SDSDYTEF+NF+KWLGV+Q
Sbjct: 368  KEEASAIKSAGKAWYHTMVSDSDYTEFDNFSKWLGVSQ 405


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