BLASTX nr result

ID: Dioscorea21_contig00000904 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00000904
         (606 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AFW79293.1| hypothetical protein ZEAMMB73_225348 [Zea mays]        176   2e-42
ref|XP_002441564.1| hypothetical protein SORBIDRAFT_09g029400 [S...   176   2e-42
gb|ACR37121.1| unknown [Zea mays]                                     176   2e-42
ref|NP_001148323.1| LOC100281932 [Zea mays] gi|195607404|gb|ACG2...   176   2e-42
dbj|BAC82908.1| putative ribosomal protein S12 [Oryza sativa Jap...   175   5e-42

>gb|AFW79293.1| hypothetical protein ZEAMMB73_225348 [Zea mays]
          Length = 156

 Score =  176 bits (447), Expect = 2e-42
 Identities = 82/87 (94%), Positives = 87/87 (100%)
 Frame = +2

Query: 2   HAAQLCLLAEDCNQPDYVKLVKALCADHNVHLVTVPSAKTLGEWAGLCKIDSEGKARKVV 181
           HAAQLC+LAEDC+QPDYVKLVKALCA+HNVHLVTVPSAKTLGEWAGLCKIDSEGKARKVV
Sbjct: 70  HAAQLCVLAEDCDQPDYVKLVKALCAEHNVHLVTVPSAKTLGEWAGLCKIDSEGKARKVV 129

Query: 182 GCSCVVIKDYGEESEGLHIVQEYVKSH 262
           GCSCVV+KDYGEESEGL+IVQEYVKSH
Sbjct: 130 GCSCVVVKDYGEESEGLNIVQEYVKSH 156


>ref|XP_002441564.1| hypothetical protein SORBIDRAFT_09g029400 [Sorghum bicolor]
           gi|241946849|gb|EES19994.1| hypothetical protein
           SORBIDRAFT_09g029400 [Sorghum bicolor]
          Length = 140

 Score =  176 bits (447), Expect = 2e-42
 Identities = 82/87 (94%), Positives = 87/87 (100%)
 Frame = +2

Query: 2   HAAQLCLLAEDCNQPDYVKLVKALCADHNVHLVTVPSAKTLGEWAGLCKIDSEGKARKVV 181
           HAAQLC+LAEDC+QPDYVKLVKALCA+HNVHLVTVPSAKTLGEWAGLCKIDSEGKARKVV
Sbjct: 54  HAAQLCVLAEDCDQPDYVKLVKALCAEHNVHLVTVPSAKTLGEWAGLCKIDSEGKARKVV 113

Query: 182 GCSCVVIKDYGEESEGLHIVQEYVKSH 262
           GCSCVV+KDYGEESEGL+IVQEYVKSH
Sbjct: 114 GCSCVVVKDYGEESEGLNIVQEYVKSH 140


>gb|ACR37121.1| unknown [Zea mays]
          Length = 140

 Score =  176 bits (447), Expect = 2e-42
 Identities = 82/87 (94%), Positives = 87/87 (100%)
 Frame = +2

Query: 2   HAAQLCLLAEDCNQPDYVKLVKALCADHNVHLVTVPSAKTLGEWAGLCKIDSEGKARKVV 181
           HAAQLC+LAEDC+QPDYVKLVKALCA+HNVHLVTVPSAKTLGEWAGLCKIDSEGKARKVV
Sbjct: 54  HAAQLCVLAEDCDQPDYVKLVKALCAEHNVHLVTVPSAKTLGEWAGLCKIDSEGKARKVV 113

Query: 182 GCSCVVIKDYGEESEGLHIVQEYVKSH 262
           GCSCVV+KDYGEESEGL+IVQEYVKSH
Sbjct: 114 GCSCVVVKDYGEESEGLNIVQEYVKSH 140


>ref|NP_001148323.1| LOC100281932 [Zea mays] gi|195607404|gb|ACG25532.1| 40S ribosomal
           protein S12 [Zea mays] gi|195617644|gb|ACG30652.1| 40S
           ribosomal protein S12 [Zea mays]
           gi|195628410|gb|ACG36035.1| 40S ribosomal protein S12
           [Zea mays] gi|413946645|gb|AFW79294.1| 40S ribosomal
           protein S12 isoform 1 [Zea mays]
           gi|413946646|gb|AFW79295.1| 40S ribosomal protein S12
           isoform 2 [Zea mays]
          Length = 140

 Score =  176 bits (447), Expect = 2e-42
 Identities = 82/87 (94%), Positives = 87/87 (100%)
 Frame = +2

Query: 2   HAAQLCLLAEDCNQPDYVKLVKALCADHNVHLVTVPSAKTLGEWAGLCKIDSEGKARKVV 181
           HAAQLC+LAEDC+QPDYVKLVKALCA+HNVHLVTVPSAKTLGEWAGLCKIDSEGKARKVV
Sbjct: 54  HAAQLCVLAEDCDQPDYVKLVKALCAEHNVHLVTVPSAKTLGEWAGLCKIDSEGKARKVV 113

Query: 182 GCSCVVIKDYGEESEGLHIVQEYVKSH 262
           GCSCVV+KDYGEESEGL+IVQEYVKSH
Sbjct: 114 GCSCVVVKDYGEESEGLNIVQEYVKSH 140


>dbj|BAC82908.1| putative ribosomal protein S12 [Oryza sativa Japonica Group]
           gi|125599129|gb|EAZ38705.1| hypothetical protein
           OsJ_23105 [Oryza sativa Japonica Group]
           gi|215765075|dbj|BAG86772.1| unnamed protein product
           [Oryza sativa Japonica Group]
           gi|215768355|dbj|BAH00584.1| unnamed protein product
           [Oryza sativa Japonica Group]
          Length = 138

 Score =  175 bits (444), Expect = 5e-42
 Identities = 81/87 (93%), Positives = 87/87 (100%)
 Frame = +2

Query: 2   HAAQLCLLAEDCNQPDYVKLVKALCADHNVHLVTVPSAKTLGEWAGLCKIDSEGKARKVV 181
           HAAQLC+LAEDC+QPDYVKLVKALCA+HNVHLVTVPSAKTLGEWAGLCKIDSEGKARKVV
Sbjct: 52  HAAQLCVLAEDCDQPDYVKLVKALCAEHNVHLVTVPSAKTLGEWAGLCKIDSEGKARKVV 111

Query: 182 GCSCVVIKDYGEESEGLHIVQEYVKSH 262
           GCSCVV+KDYGEESEGL+IVQ+YVKSH
Sbjct: 112 GCSCVVVKDYGEESEGLNIVQDYVKSH 138


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