BLASTX nr result

ID: Dioscorea21_contig00000881 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00000881
         (266 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AFS65104.1| 40S ribosomal protein S3a-like protein [Elaeis gu...   112   4e-23
emb|CBI34197.3| unnamed protein product [Vitis vinifera]              111   5e-23
ref|XP_002277791.1| PREDICTED: 40S ribosomal protein S3a-1 [Viti...   111   5e-23
sp|A7Q5X9.1|RS3A2_VITVI RecName: Full=40S ribosomal protein S3a-2     111   5e-23
ref|XP_002463138.1| hypothetical protein SORBIDRAFT_02g038370 [S...   111   7e-23

>gb|AFS65104.1| 40S ribosomal protein S3a-like protein [Elaeis guineensis]
          Length = 261

 Score =  112 bits (279), Expect = 4e-23
 Identities = 53/57 (92%), Positives = 56/57 (98%)
 Frame = -2

Query: 172 AVDPFAKKDWYDIKAPSVFSVRNVGKTLVSRTQGTKIASEGLKHRVFEVSLADLQTD 2
           AVDPFAKKDWYDIKAPSVF+VRN+GKTLVSRTQGTKIASEGLKHRVFE+SLADLQ D
Sbjct: 20  AVDPFAKKDWYDIKAPSVFNVRNIGKTLVSRTQGTKIASEGLKHRVFEISLADLQND 76


>emb|CBI34197.3| unnamed protein product [Vitis vinifera]
          Length = 215

 Score =  111 bits (278), Expect = 5e-23
 Identities = 53/57 (92%), Positives = 55/57 (96%)
 Frame = -2

Query: 172 AVDPFAKKDWYDIKAPSVFSVRNVGKTLVSRTQGTKIASEGLKHRVFEVSLADLQTD 2
           A DPFAKKDWYDIKAPS+FSVRNVGKTLVSRTQGTKIASEGLKHRVFE+SLADLQ D
Sbjct: 20  AADPFAKKDWYDIKAPSIFSVRNVGKTLVSRTQGTKIASEGLKHRVFEISLADLQND 76


>ref|XP_002277791.1| PREDICTED: 40S ribosomal protein S3a-1 [Vitis vinifera]
          Length = 261

 Score =  111 bits (278), Expect = 5e-23
 Identities = 53/57 (92%), Positives = 55/57 (96%)
 Frame = -2

Query: 172 AVDPFAKKDWYDIKAPSVFSVRNVGKTLVSRTQGTKIASEGLKHRVFEVSLADLQTD 2
           A DPFAKKDWYDIKAPS+FSVRNVGKTLVSRTQGTKIASEGLKHRVFE+SLADLQ D
Sbjct: 20  AADPFAKKDWYDIKAPSIFSVRNVGKTLVSRTQGTKIASEGLKHRVFEISLADLQND 76


>sp|A7Q5X9.1|RS3A2_VITVI RecName: Full=40S ribosomal protein S3a-2
          Length = 234

 Score =  111 bits (278), Expect = 5e-23
 Identities = 53/57 (92%), Positives = 55/57 (96%)
 Frame = -2

Query: 172 AVDPFAKKDWYDIKAPSVFSVRNVGKTLVSRTQGTKIASEGLKHRVFEVSLADLQTD 2
           A DPFAKKDWYDIKAPS+FSVRNVGKTLVSRTQGTKIASEGLKHRVFE+SLADLQ D
Sbjct: 20  AADPFAKKDWYDIKAPSIFSVRNVGKTLVSRTQGTKIASEGLKHRVFEISLADLQND 76


>ref|XP_002463138.1| hypothetical protein SORBIDRAFT_02g038370 [Sorghum bicolor]
           gi|241926515|gb|EER99659.1| hypothetical protein
           SORBIDRAFT_02g038370 [Sorghum bicolor]
          Length = 263

 Score =  111 bits (277), Expect = 7e-23
 Identities = 53/56 (94%), Positives = 56/56 (100%)
 Frame = -2

Query: 169 VDPFAKKDWYDIKAPSVFSVRNVGKTLVSRTQGTKIASEGLKHRVFEVSLADLQTD 2
           VDPF+KKDWYDIKAPSVFSVRN+GKTLVSRTQGTKIASEGLKHRVFEVSLADLQ+D
Sbjct: 21  VDPFSKKDWYDIKAPSVFSVRNIGKTLVSRTQGTKIASEGLKHRVFEVSLADLQSD 76


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