BLASTX nr result

ID: Dioscorea21_contig00000880 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00000880
         (750 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AFS65104.1| 40S ribosomal protein S3a-like protein [Elaeis gu...   366   2e-99
gb|ABK56834.1| RPS3 [Cymbidium hybrid cultivar]                       357   1e-96
ref|XP_002328352.1| predicted protein [Populus trichocarpa] gi|2...   357   1e-96
gb|ABK93399.1| unknown [Populus trichocarpa]                          354   1e-95
gb|AFK33413.1| unknown [Lotus japonicus]                              353   3e-95

>gb|AFS65104.1| 40S ribosomal protein S3a-like protein [Elaeis guineensis]
          Length = 261

 Score =  366 bits (940), Expect = 2e-99
 Identities = 181/192 (94%), Positives = 184/192 (95%)
 Frame = -1

Query: 750 LADLQTDEDQAYRKIRLRVEDVQGKNVLTNFWGMDFTTDKLRSLVRKWQTLIEAHVDVKT 571
           LADLQ DEDQAYRKIRLR EDVQGKNVLTNFWGMDFTTDKLRSLVRKWQTLIEAHVDVKT
Sbjct: 70  LADLQNDEDQAYRKIRLRAEDVQGKNVLTNFWGMDFTTDKLRSLVRKWQTLIEAHVDVKT 129

Query: 570 TDNYTLRMFCIAFTKRRPNQVKRTCYAQTSQIRQIRRKMREIMVNQATSCDLKDLVQKFI 391
           TDNYTLRMFCI FTKRRPNQVKRTCYAQTSQIRQIRRKMREIMVNQA SCDLKDLVQKFI
Sbjct: 130 TDNYTLRMFCIGFTKRRPNQVKRTCYAQTSQIRQIRRKMREIMVNQAASCDLKDLVQKFI 189

Query: 390 PEVIGKEIEKATTSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYKEDLGTKVERPADD 211
           PEVIGKEIEKATTSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYKED+G K++RPADD
Sbjct: 190 PEVIGKEIEKATTSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYKEDVGVKIDRPADD 249

Query: 210 VAAEGETEVVGA 175
           V  EGE EVVGA
Sbjct: 250 VPMEGEPEVVGA 261


>gb|ABK56834.1| RPS3 [Cymbidium hybrid cultivar]
          Length = 261

 Score =  357 bits (917), Expect = 1e-96
 Identities = 174/192 (90%), Positives = 182/192 (94%)
 Frame = -1

Query: 750 LADLQTDEDQAYRKIRLRVEDVQGKNVLTNFWGMDFTTDKLRSLVRKWQTLIEAHVDVKT 571
           LADLQ DEDQ+YRKIRLR EDVQGKNVLTNFWGMDFTTDKLRSLVRKWQTLIEAH+DVKT
Sbjct: 70  LADLQNDEDQSYRKIRLRAEDVQGKNVLTNFWGMDFTTDKLRSLVRKWQTLIEAHIDVKT 129

Query: 570 TDNYTLRMFCIAFTKRRPNQVKRTCYAQTSQIRQIRRKMREIMVNQATSCDLKDLVQKFI 391
           TDNYTLR+FCI FTKRRPNQVKRTCYAQTSQIRQIRRKMREIM NQA+SCDLK+LVQKFI
Sbjct: 130 TDNYTLRLFCIGFTKRRPNQVKRTCYAQTSQIRQIRRKMREIMTNQASSCDLKELVQKFI 189

Query: 390 PEVIGKEIEKATTSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYKEDLGTKVERPADD 211
           PEVIGKEIEKATTSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYKED G K++RP +D
Sbjct: 190 PEVIGKEIEKATTSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYKEDFGVKLDRPGED 249

Query: 210 VAAEGETEVVGA 175
           V  EGE EVVGA
Sbjct: 250 VPVEGEAEVVGA 261


>ref|XP_002328352.1| predicted protein [Populus trichocarpa] gi|222838067|gb|EEE76432.1|
           predicted protein [Populus trichocarpa]
          Length = 265

 Score =  357 bits (916), Expect = 1e-96
 Identities = 174/192 (90%), Positives = 183/192 (95%)
 Frame = -1

Query: 750 LADLQTDEDQAYRKIRLRVEDVQGKNVLTNFWGMDFTTDKLRSLVRKWQTLIEAHVDVKT 571
           LADLQ DED A+RKIRLR EDVQG+NVLTNFWGM FTTDKLRSLVRKWQTLIEAHVDVKT
Sbjct: 74  LADLQNDEDHAFRKIRLRAEDVQGRNVLTNFWGMSFTTDKLRSLVRKWQTLIEAHVDVKT 133

Query: 570 TDNYTLRMFCIAFTKRRPNQVKRTCYAQTSQIRQIRRKMREIMVNQATSCDLKDLVQKFI 391
           TDNYTLRMFCIAFTKRRPNQVKRTCYAQ+SQIRQIRRKMREIMVNQA+SCDLKDLVQKFI
Sbjct: 134 TDNYTLRMFCIAFTKRRPNQVKRTCYAQSSQIRQIRRKMREIMVNQASSCDLKDLVQKFI 193

Query: 390 PEVIGKEIEKATTSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYKEDLGTKVERPADD 211
           PEVIGKEIEKATT IYPLQNVFIRKVKILKAPKFDLGKLMEVHGDY +D+G K++RPAD+
Sbjct: 194 PEVIGKEIEKATTGIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYSQDIGVKIDRPADE 253

Query: 210 VAAEGETEVVGA 175
             AEGETEVVGA
Sbjct: 254 TVAEGETEVVGA 265


>gb|ABK93399.1| unknown [Populus trichocarpa]
          Length = 261

 Score =  354 bits (908), Expect = 1e-95
 Identities = 173/192 (90%), Positives = 182/192 (94%)
 Frame = -1

Query: 750 LADLQTDEDQAYRKIRLRVEDVQGKNVLTNFWGMDFTTDKLRSLVRKWQTLIEAHVDVKT 571
           LADLQ DED A+RKIRLR EDVQG+NVLTNFWGM FTTDKLRSLVRKWQTLIEAHVDVKT
Sbjct: 70  LADLQNDEDHAFRKIRLRAEDVQGRNVLTNFWGMSFTTDKLRSLVRKWQTLIEAHVDVKT 129

Query: 570 TDNYTLRMFCIAFTKRRPNQVKRTCYAQTSQIRQIRRKMREIMVNQATSCDLKDLVQKFI 391
           TDNYTLRMFCIAFTKR PNQVKRTCYAQ+SQIRQIRRKMREIMVNQA+SCDLKDLVQKFI
Sbjct: 130 TDNYTLRMFCIAFTKRCPNQVKRTCYAQSSQIRQIRRKMREIMVNQASSCDLKDLVQKFI 189

Query: 390 PEVIGKEIEKATTSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYKEDLGTKVERPADD 211
           PEVIGKEIEKATT IYPLQNVFIRKVKILKAPKFDLGKLMEVHGDY +D+G K++RPAD+
Sbjct: 190 PEVIGKEIEKATTGIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYSQDIGVKIDRPADE 249

Query: 210 VAAEGETEVVGA 175
             AEGETEVVGA
Sbjct: 250 TVAEGETEVVGA 261


>gb|AFK33413.1| unknown [Lotus japonicus]
          Length = 261

 Score =  353 bits (905), Expect = 3e-95
 Identities = 173/192 (90%), Positives = 183/192 (95%)
 Frame = -1

Query: 750 LADLQTDEDQAYRKIRLRVEDVQGKNVLTNFWGMDFTTDKLRSLVRKWQTLIEAHVDVKT 571
           LADLQ DED A+RKIRLR EDVQGKNVLTNFWGMDFTTDKLRSLVRKWQTLIEAHVDVKT
Sbjct: 70  LADLQGDEDNAFRKIRLRAEDVQGKNVLTNFWGMDFTTDKLRSLVRKWQTLIEAHVDVKT 129

Query: 570 TDNYTLRMFCIAFTKRRPNQVKRTCYAQTSQIRQIRRKMREIMVNQATSCDLKDLVQKFI 391
           TDNYTLRMFCIAFTKRR NQVKRTCYAQ+SQIRQIRRKMREIM+NQATSCDLK+LV+KFI
Sbjct: 130 TDNYTLRMFCIAFTKRRSNQVKRTCYAQSSQIRQIRRKMREIMINQATSCDLKELVRKFI 189

Query: 390 PEVIGKEIEKATTSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYKEDLGTKVERPADD 211
           PE+IGKEIEKAT+SIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDY ED+GTKV+RPAD+
Sbjct: 190 PEMIGKEIEKATSSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYSEDVGTKVDRPADE 249

Query: 210 VAAEGETEVVGA 175
              EG TEVVGA
Sbjct: 250 TVVEGATEVVGA 261


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