BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00000873
         (1819 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN62034.1| hypothetical protein VITISV_014731 [Vitis vinifera]   345   2e-92
ref|XP_002280625.1| PREDICTED: uncharacterized protein LOC100258...   343   7e-92
ref|XP_002521936.1| conserved hypothetical protein [Ricinus comm...   339   2e-90
sp|A2Y040.1|RPAP2_ORYSI RecName: Full=Putative RNA polymerase II...   333   9e-89
sp|Q6AVZ9.1|RPAP2_ORYSJ RecName: Full=Putative RNA polymerase II...   332   2e-88

>emb|CAN62034.1| hypothetical protein VITISV_014731 [Vitis vinifera]
          Length = 659

 Score =  345 bits (886), Expect = 2e-92
 Identities = 212/507 (41%), Positives = 293/507 (57%), Gaps = 21/507 (4%)
 Frame = +3

Query: 18   GDVSMEEWLGPSDAIEGYVPLRDRKQGAKYMSEDE-----STEMVDDAGN---GEMGFTS 173
            G+VSME+W+GPS+AIEGYVP RDR    K +   +     S   +D   N    EM F S
Sbjct: 161  GEVSMEDWIGPSNAIEGYVPQRDRNLKPKNIKNHKEGSKSSNSKMDSGKNFVIDEMDFVS 220

Query: 174  CLIMENELSVPQSDKSSVHQQDISNMIAKQ-LENLAIEEKNSPRERTSGKTRNRKTLKKV 350
             +I ++E S+ +S K    +   S+  +K+  E  +I ++ S  E+++   +N    K  
Sbjct: 221  TIITKDEYSISKSSKGL--KDTTSHAKSKEPKEKASIGDQLSMLEKSAPPIQNDSESKL- 277

Query: 351  NACKTEEKIKRAAIVCEQSKATPPNKHSVVLEDLSEQXXXXXXXXXXXXXXTVSNEAVLK 530
                 E K +R+ ++ +   +T     SV  +  SE                       K
Sbjct: 278  ----RESKGRRSRVIFKDEFSTA-EVPSVPSQSGSELNGVKGKEEYHTENAAQLGPTKPK 332

Query: 531  SSLK-SRGSKDGKTVTWADETYKAPEKKD-----------ADHGGSSNAQASHDDADEDL 674
            SSLK S G K  ++VTWADE   + + +D            D  G  +     DD    L
Sbjct: 333  SSLKPSGGKKVIRSVTWADEKMDSADSRDFCKVRELEVKKEDPNGLGDIDVGDDD--NAL 390

Query: 675  RLXXXXXXXXXXXXXXETVXXXXXXXXXXXXXXXIIILPQPQNNEKGGIEEDEEIFELDR 854
            R               E V               IIILP P++ ++G   +D ++ E + 
Sbjct: 391  RFASAEACAVALSQAAEAVASGETDMTDAVSEAGIIILPHPRDMDEGESLKDADLLEPEP 450

Query: 855  GRVKWPTKPVLLDTDMFEVEDSWHDTPPEGFKLTLSSFATMWMALFGWITSSSIAYIYGY 1034
              +KWP KP +  +D+F+ +DSW+DTPPEGF LTLS FATMWMALF WITSSSIAYIYG 
Sbjct: 451  VPLKWPIKPGISHSDIFDSDDSWYDTPPEGFSLTLSPFATMWMALFAWITSSSIAYIYGR 510

Query: 1035 NESSHEDFLTVNGREYPRKIVLQDGKSSEIRQTLDICVGRAIPALVMDLRLSLPVSSLEK 1214
            +ES HE++L+VNGREYP+KIVL DG+SSEI+QTL  C+ RA+P LV DLRL +PVS+LE+
Sbjct: 511  DESFHEEYLSVNGREYPKKIVLTDGRSSEIKQTLAGCLSRALPGLVADLRLPIPVSNLEQ 570

Query: 1215 AVGQLLDTMSLTEAVPAFRTKQWHVIVLLFLEALSLHRLPALAQRMANRNTLLHKVLNPA 1394
             VG+LLDTMS  +A+P+FR KQW VIVLLF++ALS+ R+PAL   M +R  L  KV + A
Sbjct: 571  GVGRLLDTMSFVDALPSFRMKQWQVIVLLFIDALSVCRIPALTPHMTSRRMLFPKVFDAA 630

Query: 1395 KITSEEYKTMVDLIIPLGRVPQTNSQT 1475
            ++++EEY+ M DLIIPLGRVPQ ++Q+
Sbjct: 631  QVSAEEYEVMKDLIIPLGRVPQFSAQS 657


>ref|XP_002280625.1| PREDICTED: uncharacterized protein LOC100258021 [Vitis vinifera]
            gi|296089830|emb|CBI39649.3| unnamed protein product
            [Vitis vinifera]
          Length = 659

 Score =  343 bits (881), Expect = 7e-92
 Identities = 210/507 (41%), Positives = 293/507 (57%), Gaps = 21/507 (4%)
 Frame = +3

Query: 18   GDVSMEEWLGPSDAIEGYVPLRDRKQGAKYMSE----DESTEMVDDAGNG----EMGFTS 173
            G+VSME+W+GPS+AIEGYVP RDR    K +       +S+    D+G      EM F  
Sbjct: 161  GEVSMEDWIGPSNAIEGYVPQRDRNLKPKNIKNRKEGSKSSNSKMDSGKNFVIDEMDFVR 220

Query: 174  CLIMENELSVPQSDKSSVHQQDISNMIAKQ-LENLAIEEKNSPRERTSGKTRNRKTLKKV 350
             +I E+E S+ +S K    +   S+  +K+  E  +I ++ S  E+++   +N    K  
Sbjct: 221  TIITEDEYSISKSSKGL--KDTTSHAKSKEPKEKASIGDQLSMLEKSAPPIQNDSESKL- 277

Query: 351  NACKTEEKIKRAAIVCEQSKATPPNKHSVVLEDLSEQXXXXXXXXXXXXXXTVSNEAVLK 530
                 E K +R+ ++ +   +T     SV  +  SE                      LK
Sbjct: 278  ----RESKGRRSRVIFKDEFSTA-EVPSVPSQSGSELNGVKGKEEYHTENAAQLGPTKLK 332

Query: 531  SSLK-SRGSKDGKTVTWADETYKAPEKKD-----------ADHGGSSNAQASHDDADEDL 674
            S LK S G K  ++VTWADE   + + +D            D  G  +     DD    L
Sbjct: 333  SCLKPSGGKKVTRSVTWADEKMDSADSRDFCKVRELEVKKEDPNGLGDIDVGDDD--NAL 390

Query: 675  RLXXXXXXXXXXXXXXETVXXXXXXXXXXXXXXXIIILPQPQNNEKGGIEEDEEIFELDR 854
            R               E V               IIILP P++ ++G   +D ++ E + 
Sbjct: 391  RFASAEACAIALSQAAEAVASGETDMTDAVSEARIIILPHPRDMDEGESLKDADLLEPEP 450

Query: 855  GRVKWPTKPVLLDTDMFEVEDSWHDTPPEGFKLTLSSFATMWMALFGWITSSSIAYIYGY 1034
              +KWP KP +  +D+F+ +DSW+DTPPEGF LTLS FATMWMALF WITSSSIAYIYG 
Sbjct: 451  VPLKWPIKPGISHSDIFDSDDSWYDTPPEGFSLTLSPFATMWMALFAWITSSSIAYIYGR 510

Query: 1035 NESSHEDFLTVNGREYPRKIVLQDGKSSEIRQTLDICVGRAIPALVMDLRLSLPVSSLEK 1214
            +ES HE++L+VNGREYP+KIVL DG+SSEI+QTL  C+ RA+P LV DLRL +PVS+LE+
Sbjct: 511  DESFHEEYLSVNGREYPKKIVLTDGRSSEIKQTLAGCLARALPGLVADLRLPIPVSNLEQ 570

Query: 1215 AVGQLLDTMSLTEAVPAFRTKQWHVIVLLFLEALSLHRLPALAQRMANRNTLLHKVLNPA 1394
             VG+LLDTMS  +A+P+FR KQW VIVLLF++ALS+ ++PAL   M ++  L  KV + A
Sbjct: 571  GVGRLLDTMSFVDALPSFRMKQWQVIVLLFIDALSVCQIPALTPHMISKRMLFPKVFDAA 630

Query: 1395 KITSEEYKTMVDLIIPLGRVPQTNSQT 1475
            ++++EEY+ M DLIIPLGRVPQ ++Q+
Sbjct: 631  QVSAEEYEVMKDLIIPLGRVPQFSAQS 657


>ref|XP_002521936.1| conserved hypothetical protein [Ricinus communis]
            gi|223538861|gb|EEF40460.1| conserved hypothetical
            protein [Ricinus communis]
          Length = 645

 Score =  339 bits (869), Expect = 2e-90
 Identities = 200/504 (39%), Positives = 280/504 (55%), Gaps = 20/504 (3%)
 Frame = +3

Query: 18   GDVSMEEWLGPSDAIEGYVPLRDRKQGAKYMSEDESTEMV-------DDAGNGEMGFTSC 176
            G VS+EEW+GPS+AIEGYVP  DR       +  E  + +        D    +  FTS 
Sbjct: 160  GKVSLEEWIGPSNAIEGYVPQGDRDPNPSLKNHKEGLKAICKKPVSKQDCFFSDTDFTST 219

Query: 177  LIMENELSV---PQSDKSSVHQQDISNMIAKQLENLAIEEKNSPRERTSGKTRNRKTLKK 347
            +I  +E S+   P    S+     +     K  E L  +  +  ++ +   +R  K  +K
Sbjct: 220  IITNDEYSISKGPSGLTSTASDIKLQAQTGKGHEGLNAQLSSLRKQDSIKASRKSKGRRK 279

Query: 348  VNACKTEEKIKRAAIVCEQSKATPPNKHSVVLEDLSEQXXXXXXXXXXXXXXTVSNEAVL 527
                   EK+ +  +  +   ++  + ++   ED+S+                  NE+VL
Sbjct: 280  -------EKVIKEQLNFQDLPSS--SYYTAEAEDISQATGAANL-----------NESVL 319

Query: 528  KSSLKSRGSK-DGKTVTWADETY---------KAPEKKDADHGGSSNAQASHDDADEDLR 677
            K SLKS G+K   ++VTWADE           +  E +  +     +  A+  D    LR
Sbjct: 320  KPSLKSSGAKRSNRSVTWADERVDNAGSRNLCEVQEMEQTNESHEISESANKGDDGHMLR 379

Query: 678  LXXXXXXXXXXXXXXETVXXXXXXXXXXXXXXXIIILPQPQNNEKGGIEEDEEIFELDRG 857
                           E V               II+LP  Q+  +GG  E  ++ E +  
Sbjct: 380  FESAEACAVALSQAAEAVASGDADVNKAMSEAGIIVLPPSQDLGQGGNVEKNDMIEQESA 439

Query: 858  RVKWPTKPVLLDTDMFEVEDSWHDTPPEGFKLTLSSFATMWMALFGWITSSSIAYIYGYN 1037
             +KWPTKP +  +D+F+ EDSW+D PPEGF LTLS FATMWMALF W+TSSS+AYIYG +
Sbjct: 440  SLKWPTKPGIPQSDLFDPEDSWYDAPPEGFSLTLSPFATMWMALFAWVTSSSLAYIYGRD 499

Query: 1038 ESSHEDFLTVNGREYPRKIVLQDGKSSEIRQTLDICVGRAIPALVMDLRLSLPVSSLEKA 1217
            ES+HED+L+VNGREYPRKIVL+DG+SSEIR T + C+ R  P LV +LRL +PVS+LE+ 
Sbjct: 500  ESAHEDYLSVNGREYPRKIVLRDGRSSEIRLTAESCLARTFPGLVANLRLPIPVSTLEQG 559

Query: 1218 VGQLLDTMSLTEAVPAFRTKQWHVIVLLFLEALSLHRLPALAQRMANRNTLLHKVLNPAK 1397
             G+LL+TMS  +A+PAFRTKQW VI LLF+EALS+ R+PAL   M +R  +LH+VL+ A 
Sbjct: 560  AGRLLETMSFVDALPAFRTKQWQVIALLFIEALSVCRIPALTSYMTSRRMVLHQVLDGAH 619

Query: 1398 ITSEEYKTMVDLIIPLGRVPQTNS 1469
            I++EEY  M D ++PLGR PQ  S
Sbjct: 620  ISAEEYDIMKDFMVPLGRDPQARS 643


>sp|A2Y040.1|RPAP2_ORYSI RecName: Full=Putative RNA polymerase II subunit B1 CTD phosphatase
            RPAP2 homolog; AltName: Full=RNA polymerase II-associated
            protein 2 homolog gi|125550741|gb|EAY96450.1|
            hypothetical protein OsI_18345 [Oryza sativa Indica
            Group]
          Length = 726

 Score =  333 bits (854), Expect = 9e-89
 Identities = 210/546 (38%), Positives = 295/546 (54%), Gaps = 59/546 (10%)
 Frame = +3

Query: 9    AGNGDVSMEEWLGPSDAIEGYVPLRDR-----KQGAKY---MSEDESTEMVDDAGNGEMG 164
            AG G+V+++EW+GPSDAIEGYVP RDR     K+ AK     S ++S+ +  D+ N   G
Sbjct: 181  AGTGEVTLQEWIGPSDAIEGYVPRRDRVVGGPKKEAKQNDACSAEQSSNINVDSRNASSG 240

Query: 165  FTSCLIMENELS------------VPQSDKSSVHQQDISNMIAKQLENLAIEEK-----N 293
             +  ++ EN  +              Q + + +    IS+ I KQLE++ +EEK     N
Sbjct: 241  ESGMVLTENTKAKKKEATKTPLKMFKQDEDNDMLSSCISDSIVKQLEDVVLEEKKDKKKN 300

Query: 294  SPRERTSGKTRNRKTLKKVNACKTEEKIKRAAIVCEQ--------------------SKA 413
               + TS   +++   + V     E       I+ +                     +  
Sbjct: 301  KAAKGTSRVGKSKPAKRPVGRDGHEVDFTSTIIMGDHGSEMMDHGALGQYNFSSSILANE 360

Query: 414  TPPNKHSVVLEDLS------EQXXXXXXXXXXXXXXTVSNEAVLKSSLKSRGSKD-GKTV 572
             P +     ++ +       ++                S    L+SSLK+ GSK+ G++V
Sbjct: 361  QPSSSQYAAIDSVQAYTEELDELFSNAVNIAKDETSDDSGRCTLRSSLKAVGSKNAGRSV 420

Query: 573  TWADETYKAPEKKDADHGGSSNAQASHDDADEDLRLXXXXXXXXXXXXXXETVXXXXXXX 752
             WADE     E   A    SS +Q S D +   +R               E +       
Sbjct: 421  KWADENGSVLETSRAFVSHSSKSQESMDSS---VRRESAEACAAALIEAAEAISSGTSEV 477

Query: 753  XXXXXXXXIIILPQPQNNEKGGIEEDE-------EIFELDRGRVKWPTKPVLLDTDMFEV 911
                    IIILP   N ++   + D        EIFE+DRG VKWP K VLLDTDMF+V
Sbjct: 478  EDAVSKAGIIILPDMVNQQQYNNDYDNDKDAGENEIFEIDRGVVKWPKKTVLLDTDMFDV 537

Query: 912  EDSWHDTPPEGFKLTLSSFATMWMALFGWITSSSIAYIYGYNESSHEDFLTVNGREYPRK 1091
            +DSWHDTPPEGF LTLSSFATMW ALFGW++ SS+AY+YG +ESS ED L   GRE P+K
Sbjct: 538  DDSWHDTPPEGFSLTLSSFATMWAALFGWVSRSSLAYVYGLDESSMEDLLIAGGRECPQK 597

Query: 1092 IVLQDGKSSEIRQTLDICVGRAIPALVMDLRLSLPVSSLEKAVGQLLDTMSLTEAVPAFR 1271
             VL DG SSEIR+ LD CV  A+P LV +LR+ +PVS LE  +G LLDTMS  +A+P+ R
Sbjct: 598  RVLNDGHSSEIRRALDTCVCNALPVLVSNLRMQIPVSKLEITLGYLLDTMSFVDALPSLR 657

Query: 1272 TKQWHVIVLLFLEALSLHRLPALAQRMANRNTLLHKVLNPAKITSEEYKTMVDLIIPLGR 1451
            ++QW ++VL+ L+ALSLHRLPALA  M++ + LL K+LN A+++ EEY +M+DL++P GR
Sbjct: 658  SRQWQLMVLVLLDALSLHRLPALAPIMSD-SKLLQKLLNSAQVSREEYDSMIDLLLPFGR 716

Query: 1452 VPQTNS 1469
              Q+ +
Sbjct: 717  STQSQA 722


>sp|Q6AVZ9.1|RPAP2_ORYSJ RecName: Full=Putative RNA polymerase II subunit B1 CTD phosphatase
            RPAP2 homolog; AltName: Full=RNA polymerase II-associated
            protein 2 homolog gi|51038243|gb|AAT94046.1| unknown
            protein [Oryza sativa Japonica Group]
            gi|222630100|gb|EEE62232.1| hypothetical protein
            OsJ_17019 [Oryza sativa Japonica Group]
          Length = 726

 Score =  332 bits (852), Expect = 2e-88
 Identities = 210/546 (38%), Positives = 295/546 (54%), Gaps = 59/546 (10%)
 Frame = +3

Query: 9    AGNGDVSMEEWLGPSDAIEGYVPLRDR-----KQGAKY---MSEDESTEMVDDAGNGEMG 164
            AG G+V+++EW+GPSDAIEGYVP RDR     K+ AK     S ++S+ +  D+ N   G
Sbjct: 181  AGTGEVTLQEWIGPSDAIEGYVPRRDRVVGGPKKEAKQNDACSAEQSSNINVDSRNASSG 240

Query: 165  FTSCLIMENELS------------VPQSDKSSVHQQDISNMIAKQLENLAIEEK-----N 293
             +  ++ EN  +              Q + + +    IS+ I KQLE++ +EEK     N
Sbjct: 241  ESGMVLTENTKAKKKEATKTPLKMFKQDEDNDMLSSCISDSIVKQLEDVVLEEKKDKKKN 300

Query: 294  SPRERTSGKTRNRKTLKKVNACKTEEKIKRAAIVCEQ--------------------SKA 413
               + TS   +++   + V     E       I+ ++                    +  
Sbjct: 301  KAAKGTSRVGKSKPAKRPVGRDGHEVDFTSTIIMGDRGSEMMDHGALGQYNFSSSILANE 360

Query: 414  TPPNKHSVVLEDLS------EQXXXXXXXXXXXXXXTVSNEAVLKSSLKSRGSKD-GKTV 572
             P +     ++ +       ++                S    L+SSLK+ GSK+ G +V
Sbjct: 361  QPSSSQYAAIDSVQAYTEELDELFSNAVNIAKDETSDDSGRCTLRSSLKAVGSKNAGHSV 420

Query: 573  TWADETYKAPEKKDADHGGSSNAQASHDDADEDLRLXXXXXXXXXXXXXXETVXXXXXXX 752
             WADE     E   A    SS +Q S D +   +R               E +       
Sbjct: 421  KWADENGSVLETSRAFVSHSSKSQESMDSS---VRRESAEACAAALIEAAEAISSGTSEV 477

Query: 753  XXXXXXXXIIILPQPQNNEKGGIEEDE-------EIFELDRGRVKWPTKPVLLDTDMFEV 911
                    IIILP   N ++   + D        EIFE+DRG VKWP K VLLDTDMF+V
Sbjct: 478  EDAVSKAGIIILPDMVNQQQYNNDYDNDKDAGENEIFEIDRGVVKWPKKTVLLDTDMFDV 537

Query: 912  EDSWHDTPPEGFKLTLSSFATMWMALFGWITSSSIAYIYGYNESSHEDFLTVNGREYPRK 1091
            +DSWHDTPPEGF LTLSSFATMW ALFGW++ SS+AY+YG +ESS ED L   GRE P+K
Sbjct: 538  DDSWHDTPPEGFSLTLSSFATMWAALFGWVSRSSLAYVYGLDESSMEDLLIAGGRECPQK 597

Query: 1092 IVLQDGKSSEIRQTLDICVGRAIPALVMDLRLSLPVSSLEKAVGQLLDTMSLTEAVPAFR 1271
             VL DG SSEIR+ LD CV  A+P LV +LR+ +PVS LE  +G LLDTMS  +A+P+ R
Sbjct: 598  RVLNDGHSSEIRRALDTCVCNALPVLVSNLRMQIPVSKLEITLGYLLDTMSFVDALPSLR 657

Query: 1272 TKQWHVIVLLFLEALSLHRLPALAQRMANRNTLLHKVLNPAKITSEEYKTMVDLIIPLGR 1451
            ++QW ++VL+ L+ALSLHRLPALA  M++ + LL K+LN A+++ EEY +M+DL++P GR
Sbjct: 658  SRQWQLMVLVLLDALSLHRLPALAPIMSD-SKLLQKLLNSAQVSREEYDSMIDLLLPFGR 716

Query: 1452 VPQTNS 1469
              Q+ +
Sbjct: 717  STQSQA 722