BLASTX nr result

ID: Dioscorea21_contig00000800 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00000800
         (600 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004148320.1| PREDICTED: 60S acidic ribosomal protein P3-2...    80   2e-13
ref|XP_002866199.1| hypothetical protein ARALYDRAFT_918901 [Arab...    77   2e-12
ref|XP_002314174.1| predicted protein [Populus trichocarpa] gi|2...    77   2e-12
gb|ABK94635.1| unknown [Populus trichocarpa]                           77   3e-12
emb|CAN65458.1| hypothetical protein VITISV_010073 [Vitis vinifera]    76   4e-12

>ref|XP_004148320.1| PREDICTED: 60S acidic ribosomal protein P3-2-like isoform 1
           [Cucumis sativus] gi|449461183|ref|XP_004148321.1|
           PREDICTED: 60S acidic ribosomal protein P3-2-like
           isoform 2 [Cucumis sativus]
           gi|449507401|ref|XP_004163021.1| PREDICTED: 60S acidic
           ribosomal protein P3-2-like isoform 1 [Cucumis sativus]
           gi|449507403|ref|XP_004163022.1| PREDICTED: 60S acidic
           ribosomal protein P3-2-like isoform 2 [Cucumis sativus]
           gi|449507406|ref|XP_004163023.1| PREDICTED: 60S acidic
           ribosomal protein P3-2-like isoform 3 [Cucumis sativus]
           gi|449507410|ref|XP_004163024.1| PREDICTED: 60S acidic
           ribosomal protein P3-2-like isoform 4 [Cucumis sativus]
          Length = 121

 Score = 80.5 bits (197), Expect = 2e-13
 Identities = 40/52 (76%), Positives = 46/52 (88%)
 Frame = -1

Query: 600 SQLSGDLEGSASSTFDLQRNLVKTVLGVDSSGGVQSSFSLVTPSSAVFQVIV 445
           +Q SGDLEGSA ST++LQR LV++ L VDSSGGVQSSFS +TPSSAVFQVIV
Sbjct: 18  NQYSGDLEGSADSTYELQRKLVQSALSVDSSGGVQSSFSFITPSSAVFQVIV 69


>ref|XP_002866199.1| hypothetical protein ARALYDRAFT_918901 [Arabidopsis lyrata subsp.
           lyrata] gi|297312034|gb|EFH42458.1| hypothetical protein
           ARALYDRAFT_918901 [Arabidopsis lyrata subsp. lyrata]
          Length = 120

 Score = 77.4 bits (189), Expect = 2e-12
 Identities = 39/51 (76%), Positives = 44/51 (86%)
 Frame = -1

Query: 597 QLSGDLEGSASSTFDLQRNLVKTVLGVDSSGGVQSSFSLVTPSSAVFQVIV 445
           Q  GDLE SASST+DLQR LV+T L  DSSGGVQSSFSLV+P+SAVFQVI+
Sbjct: 19  QHEGDLEASASSTYDLQRKLVQTALSADSSGGVQSSFSLVSPTSAVFQVII 69


>ref|XP_002314174.1| predicted protein [Populus trichocarpa] gi|222850582|gb|EEE88129.1|
           predicted protein [Populus trichocarpa]
          Length = 116

 Score = 77.0 bits (188), Expect = 2e-12
 Identities = 49/101 (48%), Positives = 54/101 (53%)
 Frame = -1

Query: 588 GDLEGSASSTFDLQRNLVKTVLGVDSSGGVQSSFSLVTPSSAVFQVIVXXXXXXXXXXXX 409
           GD+E SASSTF+LQR LV++ L  DSSGGVQSSFS VTPSSAVFQVI+            
Sbjct: 23  GDIEASASSTFELQRKLVQSALSADSSGGVQSSFSYVTPSSAVFQVII-------GGGCG 75

Query: 408 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXESDDDMGFSLFD 286
                                        ESDDDMGFSLFD
Sbjct: 76  GAFFGGGGGGAAAAAEAPAAEEKKKEEEPESDDDMGFSLFD 116


>gb|ABK94635.1| unknown [Populus trichocarpa]
          Length = 124

 Score = 76.6 bits (187), Expect = 3e-12
 Identities = 49/102 (48%), Positives = 54/102 (52%), Gaps = 1/102 (0%)
 Frame = -1

Query: 588 GDLEGSASSTFDLQRNLVKTVLGVDSSGGVQSSFSLVTPSSAVFQVIV-XXXXXXXXXXX 412
           GD+E SASSTF+LQR LV++ L  DSSGGVQSSFS VTPSSAVFQVI+            
Sbjct: 23  GDIEASASSTFELQRKLVQSALSADSSGGVQSSFSYVTPSSAVFQVIIGGGCGGAFFGGG 82

Query: 411 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXESDDDMGFSLFD 286
                                         ESDDDMGFSLFD
Sbjct: 83  GGGAAAAPAGGAAAAAEAPAAEEKKKEEEPESDDDMGFSLFD 124


>emb|CAN65458.1| hypothetical protein VITISV_010073 [Vitis vinifera]
          Length = 121

 Score = 76.3 bits (186), Expect = 4e-12
 Identities = 49/104 (47%), Positives = 55/104 (52%)
 Frame = -1

Query: 597 QLSGDLEGSASSTFDLQRNLVKTVLGVDSSGGVQSSFSLVTPSSAVFQVIVXXXXXXXXX 418
           Q++GDLE SA+ST+DLQR  V++ L  DSSGGVQSSFS VTPSS VFQVIV         
Sbjct: 19  QMNGDLEESAASTYDLQRKCVQSALSADSSGGVQSSFSYVTPSSGVFQVIV-GGGGGGGF 77

Query: 417 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXESDDDMGFSLFD 286
                                           ESDDDMGFSLFD
Sbjct: 78  FGGGGAAAAAPSGGGAPAADAPPAEEKKEEKEESDDDMGFSLFD 121


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