BLASTX nr result
ID: Dioscorea21_contig00000800
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Dioscorea21_contig00000800 (600 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_004148320.1| PREDICTED: 60S acidic ribosomal protein P3-2... 80 2e-13 ref|XP_002866199.1| hypothetical protein ARALYDRAFT_918901 [Arab... 77 2e-12 ref|XP_002314174.1| predicted protein [Populus trichocarpa] gi|2... 77 2e-12 gb|ABK94635.1| unknown [Populus trichocarpa] 77 3e-12 emb|CAN65458.1| hypothetical protein VITISV_010073 [Vitis vinifera] 76 4e-12 >ref|XP_004148320.1| PREDICTED: 60S acidic ribosomal protein P3-2-like isoform 1 [Cucumis sativus] gi|449461183|ref|XP_004148321.1| PREDICTED: 60S acidic ribosomal protein P3-2-like isoform 2 [Cucumis sativus] gi|449507401|ref|XP_004163021.1| PREDICTED: 60S acidic ribosomal protein P3-2-like isoform 1 [Cucumis sativus] gi|449507403|ref|XP_004163022.1| PREDICTED: 60S acidic ribosomal protein P3-2-like isoform 2 [Cucumis sativus] gi|449507406|ref|XP_004163023.1| PREDICTED: 60S acidic ribosomal protein P3-2-like isoform 3 [Cucumis sativus] gi|449507410|ref|XP_004163024.1| PREDICTED: 60S acidic ribosomal protein P3-2-like isoform 4 [Cucumis sativus] Length = 121 Score = 80.5 bits (197), Expect = 2e-13 Identities = 40/52 (76%), Positives = 46/52 (88%) Frame = -1 Query: 600 SQLSGDLEGSASSTFDLQRNLVKTVLGVDSSGGVQSSFSLVTPSSAVFQVIV 445 +Q SGDLEGSA ST++LQR LV++ L VDSSGGVQSSFS +TPSSAVFQVIV Sbjct: 18 NQYSGDLEGSADSTYELQRKLVQSALSVDSSGGVQSSFSFITPSSAVFQVIV 69 >ref|XP_002866199.1| hypothetical protein ARALYDRAFT_918901 [Arabidopsis lyrata subsp. lyrata] gi|297312034|gb|EFH42458.1| hypothetical protein ARALYDRAFT_918901 [Arabidopsis lyrata subsp. lyrata] Length = 120 Score = 77.4 bits (189), Expect = 2e-12 Identities = 39/51 (76%), Positives = 44/51 (86%) Frame = -1 Query: 597 QLSGDLEGSASSTFDLQRNLVKTVLGVDSSGGVQSSFSLVTPSSAVFQVIV 445 Q GDLE SASST+DLQR LV+T L DSSGGVQSSFSLV+P+SAVFQVI+ Sbjct: 19 QHEGDLEASASSTYDLQRKLVQTALSADSSGGVQSSFSLVSPTSAVFQVII 69 >ref|XP_002314174.1| predicted protein [Populus trichocarpa] gi|222850582|gb|EEE88129.1| predicted protein [Populus trichocarpa] Length = 116 Score = 77.0 bits (188), Expect = 2e-12 Identities = 49/101 (48%), Positives = 54/101 (53%) Frame = -1 Query: 588 GDLEGSASSTFDLQRNLVKTVLGVDSSGGVQSSFSLVTPSSAVFQVIVXXXXXXXXXXXX 409 GD+E SASSTF+LQR LV++ L DSSGGVQSSFS VTPSSAVFQVI+ Sbjct: 23 GDIEASASSTFELQRKLVQSALSADSSGGVQSSFSYVTPSSAVFQVII-------GGGCG 75 Query: 408 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXESDDDMGFSLFD 286 ESDDDMGFSLFD Sbjct: 76 GAFFGGGGGGAAAAAEAPAAEEKKKEEEPESDDDMGFSLFD 116 >gb|ABK94635.1| unknown [Populus trichocarpa] Length = 124 Score = 76.6 bits (187), Expect = 3e-12 Identities = 49/102 (48%), Positives = 54/102 (52%), Gaps = 1/102 (0%) Frame = -1 Query: 588 GDLEGSASSTFDLQRNLVKTVLGVDSSGGVQSSFSLVTPSSAVFQVIV-XXXXXXXXXXX 412 GD+E SASSTF+LQR LV++ L DSSGGVQSSFS VTPSSAVFQVI+ Sbjct: 23 GDIEASASSTFELQRKLVQSALSADSSGGVQSSFSYVTPSSAVFQVIIGGGCGGAFFGGG 82 Query: 411 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXESDDDMGFSLFD 286 ESDDDMGFSLFD Sbjct: 83 GGGAAAAPAGGAAAAAEAPAAEEKKKEEEPESDDDMGFSLFD 124 >emb|CAN65458.1| hypothetical protein VITISV_010073 [Vitis vinifera] Length = 121 Score = 76.3 bits (186), Expect = 4e-12 Identities = 49/104 (47%), Positives = 55/104 (52%) Frame = -1 Query: 597 QLSGDLEGSASSTFDLQRNLVKTVLGVDSSGGVQSSFSLVTPSSAVFQVIVXXXXXXXXX 418 Q++GDLE SA+ST+DLQR V++ L DSSGGVQSSFS VTPSS VFQVIV Sbjct: 19 QMNGDLEESAASTYDLQRKCVQSALSADSSGGVQSSFSYVTPSSGVFQVIV-GGGGGGGF 77 Query: 417 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXESDDDMGFSLFD 286 ESDDDMGFSLFD Sbjct: 78 FGGGGAAAAAPSGGGAPAADAPPAEEKKEEKEESDDDMGFSLFD 121