BLASTX nr result

ID: Dioscorea21_contig00000794 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00000794
         (535 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002516481.1| 3'-5' exonuclease, putative [Ricinus communi...   151   7e-35
emb|CBI35995.3| unnamed protein product [Vitis vinifera]              145   3e-33
ref|XP_002281479.1| PREDICTED: uncharacterized protein LOC100263...   145   3e-33
emb|CAN65003.1| hypothetical protein VITISV_023489 [Vitis vinifera]   145   3e-33
ref|XP_002308585.1| predicted protein [Populus trichocarpa] gi|2...   142   4e-32

>ref|XP_002516481.1| 3'-5' exonuclease, putative [Ricinus communis]
           gi|223544301|gb|EEF45822.1| 3'-5' exonuclease, putative
           [Ricinus communis]
          Length = 342

 Score =  151 bits (381), Expect = 7e-35
 Identities = 71/107 (66%), Positives = 91/107 (85%), Gaps = 1/107 (0%)
 Frame = +3

Query: 216 HRTRVPIPPAAVTEAGGDLPDDTD-QSSLVPIHIVDDASQLPHEFLNPSADKKLVIGFDC 392
           H+T +P+P    +++GG+ P D + Q SLVPIH+V DASQLP EFLNP+ DK+L+IGFDC
Sbjct: 8   HQTHIPLP----SDSGGNKPLDHEAQLSLVPIHVVTDASQLPAEFLNPTPDKQLIIGFDC 63

Query: 393 EGVDLCRNGALCVMQLAFPDAVYLVDAIKGGEALMQACKPALESSYI 533
           EGVDLCR+G LC+MQ+AFPDA++LVDA +GGE L++ACKPALESSYI
Sbjct: 64  EGVDLCRHGTLCIMQIAFPDAIFLVDATQGGEMLLKACKPALESSYI 110


>emb|CBI35995.3| unnamed protein product [Vitis vinifera]
          Length = 367

 Score =  145 bits (367), Expect = 3e-33
 Identities = 71/106 (66%), Positives = 87/106 (82%)
 Frame = +3

Query: 216 HRTRVPIPPAAVTEAGGDLPDDTDQSSLVPIHIVDDASQLPHEFLNPSADKKLVIGFDCE 395
           H+T +P+P    +++GG  PD     SLVPI+IV  ASQLP +FL PS  ++LVIGFDCE
Sbjct: 38  HQTYIPLP----SDSGGQHPDHAALLSLVPIYIVTHASQLPKDFLVPSPVRQLVIGFDCE 93

Query: 396 GVDLCRNGALCVMQLAFPDAVYLVDAIKGGEALMQACKPALESSYI 533
           GVDLCR+G+LC+MQLAFPDA+YLVDAI+GGE LM+ACKPALESSYI
Sbjct: 94  GVDLCRHGSLCIMQLAFPDAIYLVDAIQGGEKLMKACKPALESSYI 139


>ref|XP_002281479.1| PREDICTED: uncharacterized protein LOC100263418 [Vitis vinifera]
          Length = 336

 Score =  145 bits (367), Expect = 3e-33
 Identities = 71/106 (66%), Positives = 87/106 (82%)
 Frame = +3

Query: 216 HRTRVPIPPAAVTEAGGDLPDDTDQSSLVPIHIVDDASQLPHEFLNPSADKKLVIGFDCE 395
           H+T +P+P    +++GG  PD     SLVPI+IV  ASQLP +FL PS  ++LVIGFDCE
Sbjct: 7   HQTYIPLP----SDSGGQHPDHAALLSLVPIYIVTHASQLPKDFLVPSPVRQLVIGFDCE 62

Query: 396 GVDLCRNGALCVMQLAFPDAVYLVDAIKGGEALMQACKPALESSYI 533
           GVDLCR+G+LC+MQLAFPDA+YLVDAI+GGE LM+ACKPALESSYI
Sbjct: 63  GVDLCRHGSLCIMQLAFPDAIYLVDAIQGGEKLMKACKPALESSYI 108


>emb|CAN65003.1| hypothetical protein VITISV_023489 [Vitis vinifera]
          Length = 393

 Score =  145 bits (367), Expect = 3e-33
 Identities = 71/106 (66%), Positives = 87/106 (82%)
 Frame = +3

Query: 216 HRTRVPIPPAAVTEAGGDLPDDTDQSSLVPIHIVDDASQLPHEFLNPSADKKLVIGFDCE 395
           H+T +P+P    +++GG  PD     SLVPI+IV  ASQLP +FL PS  ++LVIGFDCE
Sbjct: 7   HQTYIPLP----SDSGGQHPDHAALLSLVPIYIVTHASQLPKDFLVPSPVRQLVIGFDCE 62

Query: 396 GVDLCRNGALCVMQLAFPDAVYLVDAIKGGEALMQACKPALESSYI 533
           GVDLCR+G+LC+MQLAFPDA+YLVDAI+GGE LM+ACKPALESSYI
Sbjct: 63  GVDLCRHGSLCIMQLAFPDAIYLVDAIQGGEKLMKACKPALESSYI 108


>ref|XP_002308585.1| predicted protein [Populus trichocarpa] gi|222854561|gb|EEE92108.1|
           predicted protein [Populus trichocarpa]
          Length = 378

 Score =  142 bits (357), Expect = 4e-32
 Identities = 72/106 (67%), Positives = 86/106 (81%)
 Frame = +3

Query: 216 HRTRVPIPPAAVTEAGGDLPDDTDQSSLVPIHIVDDASQLPHEFLNPSADKKLVIGFDCE 395
           H+TRVP P    ++ GG  P D D    VPIH+V + SQLP EFLNPSA K+L+IGFDCE
Sbjct: 10  HQTRVPFP----SDPGGK-PLDHD----VPIHVVTEPSQLPVEFLNPSAAKQLIIGFDCE 60

Query: 396 GVDLCRNGALCVMQLAFPDAVYLVDAIKGGEALMQACKPALESSYI 533
           GV+LCR+GALC+MQLAFPDA+YLVDAI GGE+L++ CKPALESSYI
Sbjct: 61  GVNLCRHGALCIMQLAFPDAIYLVDAINGGESLIKVCKPALESSYI 106


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