BLASTX nr result

ID: Dioscorea21_contig00000781 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00000781
         (325 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI20899.3| unnamed protein product [Vitis vinifera]              110   1e-22
ref|XP_002284249.1| PREDICTED: 60S ribosomal protein L37-3-like ...   110   1e-22
gb|ABK20886.1| unknown [Picea sitchensis] gi|116779815|gb|ABK214...   110   1e-22
ref|NP_001045655.1| Os02g0111700 [Oryza sativa Japonica Group] g...   109   2e-22
tpg|DAA45686.1| TPA: hypothetical protein ZEAMMB73_173562, parti...   109   2e-22

>emb|CBI20899.3| unnamed protein product [Vitis vinifera]
          Length = 156

 Score =  110 bits (275), Expect = 1e-22
 Identities = 50/55 (90%), Positives = 54/55 (98%)
 Frame = +3

Query: 3   LQKSRCAACGYPSARIRKYNWSVKAIRRKTTGTGRMRYLRHLPRRFKSNFREGTQ 167
           LQKSRCAACG+PS+RIRKYNWSVKAIRRKTTGTGRMRYLRH+P RFKSNFREGT+
Sbjct: 91  LQKSRCAACGFPSSRIRKYNWSVKAIRRKTTGTGRMRYLRHVPCRFKSNFREGTE 145


>ref|XP_002284249.1| PREDICTED: 60S ribosomal protein L37-3-like [Vitis vinifera]
          Length = 94

 Score =  110 bits (275), Expect = 1e-22
 Identities = 50/55 (90%), Positives = 54/55 (98%)
 Frame = +3

Query: 3   LQKSRCAACGYPSARIRKYNWSVKAIRRKTTGTGRMRYLRHLPRRFKSNFREGTQ 167
           LQKSRCAACG+PS+RIRKYNWSVKAIRRKTTGTGRMRYLRH+P RFKSNFREGT+
Sbjct: 29  LQKSRCAACGFPSSRIRKYNWSVKAIRRKTTGTGRMRYLRHVPCRFKSNFREGTE 83


>gb|ABK20886.1| unknown [Picea sitchensis] gi|116779815|gb|ABK21439.1| unknown
           [Picea sitchensis]
          Length = 95

 Score =  110 bits (275), Expect = 1e-22
 Identities = 49/55 (89%), Positives = 53/55 (96%)
 Frame = +3

Query: 3   LQKSRCAACGYPSARIRKYNWSVKAIRRKTTGTGRMRYLRHLPRRFKSNFREGTQ 167
           +QKSRC+AC YPS RIRKYNWSVKAIRRKTTGTGRMRYLRH+PRRFK+NFREGTQ
Sbjct: 29  IQKSRCSACAYPSKRIRKYNWSVKAIRRKTTGTGRMRYLRHMPRRFKNNFREGTQ 83


>ref|NP_001045655.1| Os02g0111700 [Oryza sativa Japonica Group] gi|315113270|pdb|3IZR|LL
           Chain l, Localization Of The Large Subunit Ribosomal
           Proteins Into A 5.5 A Cryo-Em Map Of Triticum Aestivum
           Translating 80s Ribosome gi|41052935|dbj|BAD07846.1|
           putative 60S ribosomal protein L37 [Oryza sativa
           Japonica Group] gi|113535186|dbj|BAF07569.1|
           Os02g0111700 [Oryza sativa Japonica Group]
           gi|125537774|gb|EAY84169.1| hypothetical protein
           OsI_05548 [Oryza sativa Indica Group]
           gi|125580537|gb|EAZ21468.1| hypothetical protein
           OsJ_05070 [Oryza sativa Japonica Group]
           gi|215764948|dbj|BAG86645.1| unnamed protein product
           [Oryza sativa Japonica Group]
          Length = 94

 Score =  109 bits (273), Expect = 2e-22
 Identities = 48/55 (87%), Positives = 54/55 (98%)
 Frame = +3

Query: 3   LQKSRCAACGYPSARIRKYNWSVKAIRRKTTGTGRMRYLRHLPRRFKSNFREGTQ 167
           LQKS C++CGYP+ARIRKYNWSVKAIRRKTTGTGRMRY+RH+PRRFKSNFREGT+
Sbjct: 29  LQKSTCSSCGYPAARIRKYNWSVKAIRRKTTGTGRMRYMRHVPRRFKSNFREGTE 83


>tpg|DAA45686.1| TPA: hypothetical protein ZEAMMB73_173562, partial [Zea mays]
          Length = 147

 Score =  109 bits (273), Expect = 2e-22
 Identities = 48/55 (87%), Positives = 54/55 (98%)
 Frame = +3

Query: 3   LQKSRCAACGYPSARIRKYNWSVKAIRRKTTGTGRMRYLRHLPRRFKSNFREGTQ 167
           LQKS C++CGYP+ARIRKYNWSVKAIRRKTTGTGRMRY+RH+PRRFKSNFREGT+
Sbjct: 82  LQKSTCSSCGYPAARIRKYNWSVKAIRRKTTGTGRMRYMRHVPRRFKSNFREGTE 136


Top