BLASTX nr result

ID: Dioscorea21_contig00000779 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00000779
         (796 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003537293.1| PREDICTED: 60S ribosomal protein L12-like [G...   317   1e-84
ref|XP_002530279.1| 60S ribosomal protein L12, putative [Ricinus...   316   4e-84
ref|XP_003542515.1| PREDICTED: 60S ribosomal protein L12-like [G...   314   1e-83
ref|XP_003632111.1| PREDICTED: 60S ribosomal protein L12-like [V...   313   2e-83
ref|NP_001240945.1| uncharacterized protein LOC100811654 [Glycin...   313   3e-83

>ref|XP_003537293.1| PREDICTED: 60S ribosomal protein L12-like [Glycine max]
          Length = 166

 Score =  317 bits (813), Expect = 1e-84
 Identities = 158/166 (95%), Positives = 166/166 (100%)
 Frame = -2

Query: 720 MPPKFDPTQVVDVYVRVTGGEVGAASSLAPKIGPLGLSPKKIGEDIAKETAKDWKGLRVT 541
           MPPKFDP+QVVDV+VRVTGGEVGAASSLAPKIGPLGLSPKKIGEDIAKETAKDWKGLRVT
Sbjct: 1   MPPKFDPSQVVDVFVRVTGGEVGAASSLAPKIGPLGLSPKKIGEDIAKETAKDWKGLRVT 60

Query: 540 VKLTVQNRQAKVSVVPSAAALVIKALKEPERDRKKTKNIKHSGNISLDDVIEIARIMSPR 361
           VKLTVQNRQAKV+VVPSAAALVIKALKEPERDRKKTKNIKHSGNISLDDV+EIAR+MSPR
Sbjct: 61  VKLTVQNRQAKVTVVPSAAALVIKALKEPERDRKKTKNIKHSGNISLDDVVEIARVMSPR 120

Query: 360 SMAKDLSGTVKEILGTCVSVGCTVDGKDPKDLQQEITEGDVEVPLE 223
           SMAKDLSGT+KEILGTCVSVGCTVDGKDPKDLQQEI++GDVEVPLE
Sbjct: 121 SMAKDLSGTIKEILGTCVSVGCTVDGKDPKDLQQEISDGDVEVPLE 166


>ref|XP_002530279.1| 60S ribosomal protein L12, putative [Ricinus communis]
           gi|223530177|gb|EEF32086.1| 60S ribosomal protein L12,
           putative [Ricinus communis]
          Length = 166

 Score =  316 bits (809), Expect = 4e-84
 Identities = 158/166 (95%), Positives = 165/166 (99%)
 Frame = -2

Query: 720 MPPKFDPTQVVDVYVRVTGGEVGAASSLAPKIGPLGLSPKKIGEDIAKETAKDWKGLRVT 541
           MPPKFDP+QVVDV+VRVTGGEVGAASSLAPKIGPLGLSPKKIGEDIAKETAKDWKGLRVT
Sbjct: 1   MPPKFDPSQVVDVFVRVTGGEVGAASSLAPKIGPLGLSPKKIGEDIAKETAKDWKGLRVT 60

Query: 540 VKLTVQNRQAKVSVVPSAAALVIKALKEPERDRKKTKNIKHSGNISLDDVIEIARIMSPR 361
           VKLTVQNRQAKV+VVPSAAALVIKALKEPERDRKKTKNIKHSGNISLDDVIEIA++M PR
Sbjct: 61  VKLTVQNRQAKVTVVPSAAALVIKALKEPERDRKKTKNIKHSGNISLDDVIEIAKVMKPR 120

Query: 360 SMAKDLSGTVKEILGTCVSVGCTVDGKDPKDLQQEITEGDVEVPLE 223
           SMAKDLSGTVKEILGTCVSVGCTVDGKDPKDLQQEIT+GDVEVPL+
Sbjct: 121 SMAKDLSGTVKEILGTCVSVGCTVDGKDPKDLQQEITDGDVEVPLD 166


>ref|XP_003542515.1| PREDICTED: 60S ribosomal protein L12-like [Glycine max]
          Length = 166

 Score =  314 bits (805), Expect = 1e-83
 Identities = 156/165 (94%), Positives = 165/165 (100%)
 Frame = -2

Query: 720 MPPKFDPTQVVDVYVRVTGGEVGAASSLAPKIGPLGLSPKKIGEDIAKETAKDWKGLRVT 541
           MPPKFDP+QVVDV+VRVTGGEVGAASSLAPKIGPLGLSPKKIGEDIAKETAKDWKGLRVT
Sbjct: 1   MPPKFDPSQVVDVFVRVTGGEVGAASSLAPKIGPLGLSPKKIGEDIAKETAKDWKGLRVT 60

Query: 540 VKLTVQNRQAKVSVVPSAAALVIKALKEPERDRKKTKNIKHSGNISLDDVIEIARIMSPR 361
           VKLTVQNRQAKV+VVPSAAALVIKALKEPERDRKKTKNIKH+GNISLDDV+EIAR+MSPR
Sbjct: 61  VKLTVQNRQAKVTVVPSAAALVIKALKEPERDRKKTKNIKHNGNISLDDVVEIARVMSPR 120

Query: 360 SMAKDLSGTVKEILGTCVSVGCTVDGKDPKDLQQEITEGDVEVPL 226
           SMAKDLSGT+KEILGTCVSVGCTVDGKDPKDLQQEI++GDVEVPL
Sbjct: 121 SMAKDLSGTIKEILGTCVSVGCTVDGKDPKDLQQEISDGDVEVPL 165


>ref|XP_003632111.1| PREDICTED: 60S ribosomal protein L12-like [Vitis vinifera]
          Length = 166

 Score =  313 bits (803), Expect = 2e-83
 Identities = 157/166 (94%), Positives = 164/166 (98%)
 Frame = -2

Query: 720 MPPKFDPTQVVDVYVRVTGGEVGAASSLAPKIGPLGLSPKKIGEDIAKETAKDWKGLRVT 541
           MPPKFDP+QVVDVYVRVTGGEVGAASSLAPKIGPLGLSPKKIGEDIAKETAKDWKGLRVT
Sbjct: 1   MPPKFDPSQVVDVYVRVTGGEVGAASSLAPKIGPLGLSPKKIGEDIAKETAKDWKGLRVT 60

Query: 540 VKLTVQNRQAKVSVVPSAAALVIKALKEPERDRKKTKNIKHSGNISLDDVIEIARIMSPR 361
           VKLTVQNRQAKVSVVPSAAALVIKALKEPERDRKKTKNIKH+GNISLDDVIEIA+IM PR
Sbjct: 61  VKLTVQNRQAKVSVVPSAAALVIKALKEPERDRKKTKNIKHNGNISLDDVIEIAKIMRPR 120

Query: 360 SMAKDLSGTVKEILGTCVSVGCTVDGKDPKDLQQEITEGDVEVPLE 223
           SMAKDLSG+VKEILGTCVSVGCTVDGKDPKDLQQEI +GDVE+PL+
Sbjct: 121 SMAKDLSGSVKEILGTCVSVGCTVDGKDPKDLQQEIADGDVEIPLD 166


>ref|NP_001240945.1| uncharacterized protein LOC100811654 [Glycine max]
           gi|255647178|gb|ACU24057.1| unknown [Glycine max]
          Length = 166

 Score =  313 bits (802), Expect = 3e-83
 Identities = 155/166 (93%), Positives = 165/166 (99%)
 Frame = -2

Query: 720 MPPKFDPTQVVDVYVRVTGGEVGAASSLAPKIGPLGLSPKKIGEDIAKETAKDWKGLRVT 541
           MPPKFDP+Q+VDV+VRVTGGEVGAASSLAPKIGPLGLSPKKIGEDIAKETAKDWKGLRVT
Sbjct: 1   MPPKFDPSQIVDVFVRVTGGEVGAASSLAPKIGPLGLSPKKIGEDIAKETAKDWKGLRVT 60

Query: 540 VKLTVQNRQAKVSVVPSAAALVIKALKEPERDRKKTKNIKHSGNISLDDVIEIARIMSPR 361
           VKLTVQNRQAKV+VVPSAAALVIKALKEPERDRKKTKNIKH+GNISLDDVIEIAR+M PR
Sbjct: 61  VKLTVQNRQAKVTVVPSAAALVIKALKEPERDRKKTKNIKHNGNISLDDVIEIARVMRPR 120

Query: 360 SMAKDLSGTVKEILGTCVSVGCTVDGKDPKDLQQEITEGDVEVPLE 223
           SMAKDLSG++KEILGTCVSVGCTVDGKDPKDLQQEIT+GDVEVPL+
Sbjct: 121 SMAKDLSGSIKEILGTCVSVGCTVDGKDPKDLQQEITDGDVEVPLD 166


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