BLASTX nr result

ID: Dioscorea21_contig00000756 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00000756
         (787 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_001059699.1| Os07g0496000 [Oryza sativa Japonica Group] g...   242   6e-62
ref|XP_002526504.1| protein with unknown function [Ricinus commu...   242   8e-62
ref|XP_003560185.1| PREDICTED: ras-related protein RABH1b-like [...   241   1e-61
ref|XP_002302484.1| predicted protein [Populus trichocarpa] gi|2...   241   1e-61
ref|NP_001141348.1| uncharacterized protein LOC100273439 [Zea ma...   240   3e-61

>ref|NP_001059699.1| Os07g0496000 [Oryza sativa Japonica Group]
           gi|24059912|dbj|BAC21376.1| GTP-binding protein Rab6
           [Oryza sativa Japonica Group]
           gi|113611235|dbj|BAF21613.1| Os07g0496000 [Oryza sativa
           Japonica Group]
          Length = 208

 Score =  242 bits (618), Expect = 6e-62
 Identities = 123/135 (91%), Positives = 131/135 (97%)
 Frame = +3

Query: 3   LIPSYIRDSSVAVIVYDVASRQSFLNTSKWIEEVRTERGTDVIIVLVGNKTDLVDKRQVS 182
           LIPSYIRDSSVAVIV+DVASRQSFLNTSKWIEEVRTERG+DVIIVLVGNKTDLVDKRQVS
Sbjct: 74  LIPSYIRDSSVAVIVFDVASRQSFLNTSKWIEEVRTERGSDVIIVLVGNKTDLVDKRQVS 133

Query: 183 IEEGEAKAKDLGVMFIETSAKAGFNVKALFRKIAAALPGMETLSSTKQEDMVDVNLKATN 362
           IEEGE KAKDLGVMFIETSAKAGFN+KALFRKIAAALPGMETLSS KQEDMVDVNLK++N
Sbjct: 134 IEEGEGKAKDLGVMFIETSAKAGFNIKALFRKIAAALPGMETLSSAKQEDMVDVNLKSSN 193

Query: 363 ANTSQSQQASGGCNC 407
           AN+SQSQ  +GGC+C
Sbjct: 194 ANSSQSQAQAGGCSC 208


>ref|XP_002526504.1| protein with unknown function [Ricinus communis]
           gi|223534179|gb|EEF35895.1| protein with unknown
           function [Ricinus communis]
          Length = 208

 Score =  242 bits (617), Expect = 8e-62
 Identities = 124/135 (91%), Positives = 129/135 (95%)
 Frame = +3

Query: 3   LIPSYIRDSSVAVIVYDVASRQSFLNTSKWIEEVRTERGTDVIIVLVGNKTDLVDKRQVS 182
           LIPSYIRDSSVAVIVYDVASRQSFLNTSKWIEEVRTERG+DVIIVLVGNKTDLVDKRQVS
Sbjct: 74  LIPSYIRDSSVAVIVYDVASRQSFLNTSKWIEEVRTERGSDVIIVLVGNKTDLVDKRQVS 133

Query: 183 IEEGEAKAKDLGVMFIETSAKAGFNVKALFRKIAAALPGMETLSSTKQEDMVDVNLKATN 362
           IEEGEAKA+DL VMFIETSAKAGFN+KALFRKIAAALPGMETLSSTKQEDMVDVNLK++N
Sbjct: 134 IEEGEAKARDLNVMFIETSAKAGFNIKALFRKIAAALPGMETLSSTKQEDMVDVNLKSSN 193

Query: 363 ANTSQSQQASGGCNC 407
            N SQSQ  SGGC C
Sbjct: 194 TNASQSQPQSGGCAC 208


>ref|XP_003560185.1| PREDICTED: ras-related protein RABH1b-like [Brachypodium
           distachyon]
          Length = 293

 Score =  241 bits (615), Expect = 1e-61
 Identities = 123/135 (91%), Positives = 130/135 (96%)
 Frame = +3

Query: 3   LIPSYIRDSSVAVIVYDVASRQSFLNTSKWIEEVRTERGTDVIIVLVGNKTDLVDKRQVS 182
           LIPSYIRDSSVAVIV+DVASRQSFLNTSKWIEEVRTERG+DVIIVLVGNKTDLVDKRQVS
Sbjct: 159 LIPSYIRDSSVAVIVFDVASRQSFLNTSKWIEEVRTERGSDVIIVLVGNKTDLVDKRQVS 218

Query: 183 IEEGEAKAKDLGVMFIETSAKAGFNVKALFRKIAAALPGMETLSSTKQEDMVDVNLKATN 362
           IEEGE KAKDLGVMFIETSAKAGFN+KALFRKIAAALPGMETLSS KQEDMVDVNLK+ N
Sbjct: 219 IEEGEGKAKDLGVMFIETSAKAGFNIKALFRKIAAALPGMETLSSAKQEDMVDVNLKSGN 278

Query: 363 ANTSQSQQASGGCNC 407
           AN+SQSQ  +GGC+C
Sbjct: 279 ANSSQSQAQAGGCSC 293


>ref|XP_002302484.1| predicted protein [Populus trichocarpa] gi|222844210|gb|EEE81757.1|
           predicted protein [Populus trichocarpa]
          Length = 208

 Score =  241 bits (615), Expect = 1e-61
 Identities = 123/135 (91%), Positives = 131/135 (97%)
 Frame = +3

Query: 3   LIPSYIRDSSVAVIVYDVASRQSFLNTSKWIEEVRTERGTDVIIVLVGNKTDLVDKRQVS 182
           LIPSYIRDSSVAVIV+DVASRQSFLNTSKWIEEVR+ERG+DVIIVLVGNKTDLVDKRQVS
Sbjct: 74  LIPSYIRDSSVAVIVFDVASRQSFLNTSKWIEEVRSERGSDVIIVLVGNKTDLVDKRQVS 133

Query: 183 IEEGEAKAKDLGVMFIETSAKAGFNVKALFRKIAAALPGMETLSSTKQEDMVDVNLKATN 362
           IEEGEAKA+DL VMFIETSAKAGFN+KALFRKIAAALPGMETLSS+KQEDMVDVNLK++N
Sbjct: 134 IEEGEAKARDLNVMFIETSAKAGFNIKALFRKIAAALPGMETLSSSKQEDMVDVNLKSSN 193

Query: 363 ANTSQSQQASGGCNC 407
           AN SQSQQ SGGC C
Sbjct: 194 ANASQSQQQSGGCAC 208


>ref|NP_001141348.1| uncharacterized protein LOC100273439 [Zea mays]
           gi|194704110|gb|ACF86139.1| unknown [Zea mays]
          Length = 190

 Score =  240 bits (612), Expect = 3e-61
 Identities = 122/135 (90%), Positives = 130/135 (96%)
 Frame = +3

Query: 3   LIPSYIRDSSVAVIVYDVASRQSFLNTSKWIEEVRTERGTDVIIVLVGNKTDLVDKRQVS 182
           LIPSYIRDSSVAVIV+DVASRQSFLNTSKWIEEVRTERG+DVIIVLVGNKTDLVDKRQVS
Sbjct: 56  LIPSYIRDSSVAVIVFDVASRQSFLNTSKWIEEVRTERGSDVIIVLVGNKTDLVDKRQVS 115

Query: 183 IEEGEAKAKDLGVMFIETSAKAGFNVKALFRKIAAALPGMETLSSTKQEDMVDVNLKATN 362
           IEEGE KAKDLGVMFIETSAKAGFN+KALFRKIAAALPGMETLSS KQEDMVDVNL++ N
Sbjct: 116 IEEGEGKAKDLGVMFIETSAKAGFNIKALFRKIAAALPGMETLSSAKQEDMVDVNLRSGN 175

Query: 363 ANTSQSQQASGGCNC 407
           AN+SQSQ  +GGC+C
Sbjct: 176 ANSSQSQAQAGGCSC 190


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