BLASTX nr result

ID: Dioscorea21_contig00000679 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00000679
         (410 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004138144.1| PREDICTED: uncharacterized protein LOC101216...    70   1e-10
ref|XP_003617344.1| Nodulin-related protein [Medicago truncatula...    70   2e-10
ref|XP_002511499.1| conserved hypothetical protein [Ricinus comm...    70   2e-10
ref|XP_002879492.1| hypothetical protein ARALYDRAFT_321151 [Arab...    69   3e-10
ref|XP_002266496.1| PREDICTED: uncharacterized protein LOC100250...    68   9e-10

>ref|XP_004138144.1| PREDICTED: uncharacterized protein LOC101216552 [Cucumis sativus]
           gi|449477327|ref|XP_004154992.1| PREDICTED:
           uncharacterized protein LOC101231734 [Cucumis sativus]
          Length = 531

 Score = 70.5 bits (171), Expect = 1e-10
 Identities = 43/125 (34%), Positives = 67/125 (53%), Gaps = 1/125 (0%)
 Frame = +2

Query: 5   TLYNGNTGAFVXXXXXXXXXXXXXXXYFVKIHQTDGRDDKKHLDTFSIITLIIAGYLMMV 184
           T++NG   +F+               +FV+IH  D   +K+HL+T SIITL++A YLM+ 
Sbjct: 172 TIFNGQPTSFLLMLALLPTLNSLLCMWFVRIHHVDDGIEKEHLNTLSIITLVVATYLMIK 231

Query: 185 ILGENILTLETSVRIVAFXXXXXXXMSPLIVAIKAQLHD-WKTLSESYDESTRPLIGDVN 361
           I+ E+I T +  + +  F        SPL +AI+AQ  +  + L  S+ ES + LIG  N
Sbjct: 232 IVLEHIFTFQFPLHVATFILLLMLLASPLYIAIRAQPRESRRILHPSFTESDQ-LIGRHN 290

Query: 362 YAVTD 376
              +D
Sbjct: 291 QETSD 295


>ref|XP_003617344.1| Nodulin-related protein [Medicago truncatula]
           gi|355518679|gb|AET00303.1| Nodulin-related protein
           [Medicago truncatula]
          Length = 535

 Score = 69.7 bits (169), Expect = 2e-10
 Identities = 38/98 (38%), Positives = 57/98 (58%), Gaps = 2/98 (2%)
 Frame = +2

Query: 2   RTLYNGNTGAFVXXXXXXXXXXXXXXXYFVKIHQT--DGRDDKKHLDTFSIITLIIAGYL 175
           RT++N N  +++               +FV+IH T  +G  +KK+L+ FS++ L+IA YL
Sbjct: 168 RTVFNNNPMSYLLMLSLLPPINTLILMWFVRIHNTRREGESEKKYLNIFSLMALVIAAYL 227

Query: 176 MMVILGENILTLETSVRIVAFXXXXXXXMSPLIVAIKA 289
           M+VI+ ENILTL+ S+RI  F        S L +A KA
Sbjct: 228 MIVIILENILTLQLSIRIFTFIVLMVLLASLLCIAFKA 265


>ref|XP_002511499.1| conserved hypothetical protein [Ricinus communis]
           gi|223550614|gb|EEF52101.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 535

 Score = 69.7 bits (169), Expect = 2e-10
 Identities = 39/116 (33%), Positives = 63/116 (54%), Gaps = 3/116 (2%)
 Frame = +2

Query: 2   RTLYNGNTGAFVXXXXXXXXXXXXXXXYFVKIHQTDGRDDKKHLDTFSIITLIIAGYLMM 181
           +T++N     ++               +FV+I+     D+KK+LD+FS+I L +A YLM+
Sbjct: 175 QTMFNNKPTLYLLMLSLLSSINPVILMWFVRIYTVSEGDEKKYLDSFSVIALFLAAYLMI 234

Query: 182 VILGENILTLETSVRIVAFXXXXXXXMSPLIVAIKAQLHDWKTLSES---YDESTR 340
           +I+ E++ + + +VRI+AF       MSPL VAIK    +   +SE     DES R
Sbjct: 235 IIILEHVFSFQFTVRIIAFVLLMMLLMSPLFVAIKVPEKESDIVSERNQLVDESKR 290


>ref|XP_002879492.1| hypothetical protein ARALYDRAFT_321151 [Arabidopsis lyrata subsp.
            lyrata] gi|297325331|gb|EFH55751.1| hypothetical protein
            ARALYDRAFT_321151 [Arabidopsis lyrata subsp. lyrata]
          Length = 2264

 Score = 69.3 bits (168), Expect = 3e-10
 Identities = 38/100 (38%), Positives = 55/100 (55%)
 Frame = +2

Query: 17   GNTGAFVXXXXXXXXXXXXXXXYFVKIHQTDGRDDKKHLDTFSIITLIIAGYLMMVILGE 196
            GN   F+                FV++++T    DKKHLD  S+I+LIIA YLM++I  E
Sbjct: 757  GNPATFILLLAIAPTLVMFVTMPFVRVYETVTTSDKKHLDGLSVISLIIAAYLMVIITVE 816

Query: 197  NILTLETSVRIVAFXXXXXXXMSPLIVAIKAQLHDWKTLS 316
            N+L L  S++I +F        SPL VA++A   + +TLS
Sbjct: 817  NVLGLSRSMQIFSFILLLLLLASPLFVAVRALREERQTLS 856



 Score = 58.2 bits (139), Expect = 7e-07
 Identities = 31/69 (44%), Positives = 44/69 (63%)
 Frame = +2

Query: 86  FVKIHQTDGRDDKKHLDTFSIITLIIAGYLMMVILGENILTLETSVRIVAFXXXXXXXMS 265
           FV+ + T    DKKHL+  S I+LII  YLM+VIL ENI+ +   ++I +F        S
Sbjct: 198 FVRTYDTVIAGDKKHLNGLSAISLIIVTYLMVVILVENIIGMSMPMKICSFTFLLILLAS 257

Query: 266 PLIVAIKAQ 292
           PL+VA++AQ
Sbjct: 258 PLLVAVRAQ 266


>ref|XP_002266496.1| PREDICTED: uncharacterized protein LOC100250053 [Vitis vinifera]
          Length = 537

 Score = 67.8 bits (164), Expect = 9e-10
 Identities = 37/118 (31%), Positives = 60/118 (50%)
 Frame = +2

Query: 2   RTLYNGNTGAFVXXXXXXXXXXXXXXXYFVKIHQTDGRDDKKHLDTFSIITLIIAGYLMM 181
           + ++ GN  +++                 V+I+ T   D+KKHL+ FS++ L++AGYLM 
Sbjct: 173 QAIFKGNPASYLLMLMLVTTVNPLLLMCLVRIYNTKEGDEKKHLNGFSLVALVVAGYLMA 232

Query: 182 VILGENILTLETSVRIVAFXXXXXXXMSPLIVAIKAQLHDWKTLSESYDESTRPLIGD 355
           +I+ ENILTL+   R+            PL V IKAQ  ++   S+++      LI D
Sbjct: 233 LIILENILTLQFPARLFTLVLLLLLLAMPLAVTIKAQQSNFDGTSQTFLIEKNQLIDD 290


Top