BLASTX nr result

ID: Dioscorea21_contig00000669 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00000669
         (1042 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002271466.1| PREDICTED: 50S ribosomal protein L3-1, chlor...   406   e-111
ref|XP_002523967.1| 50S ribosomal protein L3, putative [Ricinus ...   399   e-109
ref|XP_002319213.1| predicted protein [Populus trichocarpa] gi|2...   396   e-108
ref|XP_004154027.1| PREDICTED: 50S ribosomal protein L3, chlorop...   394   e-107
ref|XP_004145066.1| PREDICTED: 50S ribosomal protein L3, chlorop...   394   e-107

>ref|XP_002271466.1| PREDICTED: 50S ribosomal protein L3-1, chloroplastic-like [Vitis
           vinifera]
          Length = 281

 Score =  406 bits (1043), Expect = e-111
 Identities = 199/222 (89%), Positives = 209/222 (94%)
 Frame = -1

Query: 889 MSMEAGVGVMGTKLGMMSVFEPEGTVVPVTVIGFREGNIVTQVKTPATDGYHAVQVGYRR 710
           MSMEAGVGVM TKLGMMS FEPEG VVPVTV+GFREGNIVTQVKT ATDGY AVQVGYRR
Sbjct: 60  MSMEAGVGVMATKLGMMSYFEPEGKVVPVTVVGFREGNIVTQVKTEATDGYSAVQVGYRR 119

Query: 709 VRDRKLTKPELGHLEKAGAIPMRHLQEFRLQSVDGFEPGERLVIEDILKEGDLVDVSGNS 530
           VRDRKLTKPE+GHLEKAG IPMRHLQEFRL SVDGFEP ++LV E++ KEGDLVDVSG +
Sbjct: 120 VRDRKLTKPEMGHLEKAGTIPMRHLQEFRLVSVDGFEPNQKLVFEELFKEGDLVDVSGIT 179

Query: 529 IGKGFQGGIKRHNFRRGPMTHGSKSHRALGSIGAGTTPGRVYKGKKMPGRMGGTKTKVRK 350
           IGKGFQGGIKRHNFRRGPMTHGSKSHRALGSIGAGTTPG VYKGKKMPGRMGGTKTK+RK
Sbjct: 180 IGKGFQGGIKRHNFRRGPMTHGSKSHRALGSIGAGTTPGHVYKGKKMPGRMGGTKTKIRK 239

Query: 349 LKIIKIDTELRVVMIKGAVPGKPGNLLRITPAKIVGKNIPKN 224
           LKI+KID +LRVVMIKGAVPGKPGNLLRITPAKIVGKNIPKN
Sbjct: 240 LKIVKIDNDLRVVMIKGAVPGKPGNLLRITPAKIVGKNIPKN 281


>ref|XP_002523967.1| 50S ribosomal protein L3, putative [Ricinus communis]
           gi|223536694|gb|EEF38335.1| 50S ribosomal protein L3,
           putative [Ricinus communis]
          Length = 285

 Score =  399 bits (1026), Expect = e-109
 Identities = 192/222 (86%), Positives = 210/222 (94%)
 Frame = -1

Query: 889 MSMEAGVGVMGTKLGMMSVFEPEGTVVPVTVIGFREGNIVTQVKTPATDGYHAVQVGYRR 710
           MSMEAG+GVMGTKLGMMS FE +GTVVPVTV+GFREGNIVTQ+KT ATDGY +VQVGYRR
Sbjct: 64  MSMEAGIGVMGTKLGMMSYFESDGTVVPVTVVGFREGNIVTQIKTEATDGYDSVQVGYRR 123

Query: 709 VRDRKLTKPELGHLEKAGAIPMRHLQEFRLQSVDGFEPGERLVIEDILKEGDLVDVSGNS 530
           +RDRKLTKPELGHLEKAG IPMRHLQEFRLQ++DGFE G++LV+E+I KEGDLVDVSG +
Sbjct: 124 IRDRKLTKPELGHLEKAGVIPMRHLQEFRLQNIDGFEVGQKLVLEEIFKEGDLVDVSGIT 183

Query: 529 IGKGFQGGIKRHNFRRGPMTHGSKSHRALGSIGAGTTPGRVYKGKKMPGRMGGTKTKVRK 350
           IGKGFQGGIKRHNF+RG MTHGSKSHRALGSIGAGTTPGRVYKGKKMPGRMGGTKTK+RK
Sbjct: 184 IGKGFQGGIKRHNFKRGQMTHGSKSHRALGSIGAGTTPGRVYKGKKMPGRMGGTKTKIRK 243

Query: 349 LKIIKIDTELRVVMIKGAVPGKPGNLLRITPAKIVGKNIPKN 224
           LKI+KID +LR VMIKGA+PGKPGNLLRI PAKIVGKNIPKN
Sbjct: 244 LKIVKIDNDLRAVMIKGALPGKPGNLLRIAPAKIVGKNIPKN 285


>ref|XP_002319213.1| predicted protein [Populus trichocarpa] gi|222857589|gb|EEE95136.1|
           predicted protein [Populus trichocarpa]
          Length = 222

 Score =  396 bits (1018), Expect = e-108
 Identities = 190/222 (85%), Positives = 209/222 (94%)
 Frame = -1

Query: 889 MSMEAGVGVMGTKLGMMSVFEPEGTVVPVTVIGFREGNIVTQVKTPATDGYHAVQVGYRR 710
           MSMEAGVGVMGTKLGMM+ FEP G VVPVTV+GFREGNIVTQ+KT ATDGY AVQVGYRR
Sbjct: 1   MSMEAGVGVMGTKLGMMTYFEPNGKVVPVTVVGFREGNIVTQIKTDATDGYDAVQVGYRR 60

Query: 709 VRDRKLTKPELGHLEKAGAIPMRHLQEFRLQSVDGFEPGERLVIEDILKEGDLVDVSGNS 530
           VRD+KLTKPE+GHLEKAG IPMRHLQEFRLQ +DGFE G++L+ E++ KEGDLVDVSG +
Sbjct: 61  VRDKKLTKPEMGHLEKAGVIPMRHLQEFRLQGLDGFEIGQKLLFEELFKEGDLVDVSGTT 120

Query: 529 IGKGFQGGIKRHNFRRGPMTHGSKSHRALGSIGAGTTPGRVYKGKKMPGRMGGTKTKVRK 350
           IGKGFQGGIKRHNF+RGPM+HGSKSHRALGSIGAGTTPGRVYKGKKMPGRMGGTKTK+RK
Sbjct: 121 IGKGFQGGIKRHNFKRGPMSHGSKSHRALGSIGAGTTPGRVYKGKKMPGRMGGTKTKIRK 180

Query: 349 LKIIKIDTELRVVMIKGAVPGKPGNLLRITPAKIVGKNIPKN 224
           LKI+KID +LRVVMIKGA+PGKPGNLLRI PAKIVGKNIPK+
Sbjct: 181 LKIVKIDNDLRVVMIKGALPGKPGNLLRIAPAKIVGKNIPKS 222


>ref|XP_004154027.1| PREDICTED: 50S ribosomal protein L3, chloroplastic-like [Cucumis
           sativus]
          Length = 294

 Score =  394 bits (1013), Expect = e-107
 Identities = 191/222 (86%), Positives = 207/222 (93%)
 Frame = -1

Query: 889 MSMEAGVGVMGTKLGMMSVFEPEGTVVPVTVIGFREGNIVTQVKTPATDGYHAVQVGYRR 710
           MSMEAG+GVM TKLGMMS FEP+G VVPVTV+GF+EGNIVTQVKT ATDGY AVQVGYRR
Sbjct: 73  MSMEAGIGVMATKLGMMSFFEPDGKVVPVTVVGFKEGNIVTQVKTDATDGYSAVQVGYRR 132

Query: 709 VRDRKLTKPELGHLEKAGAIPMRHLQEFRLQSVDGFEPGERLVIEDILKEGDLVDVSGNS 530
           VRDRKLTKPELGHLEKAGAIPMRHLQEFRL+SVD FEP +RLV  ++ KEGDLVDVSG +
Sbjct: 133 VRDRKLTKPELGHLEKAGAIPMRHLQEFRLESVDAFEPNQRLVFNELFKEGDLVDVSGTT 192

Query: 529 IGKGFQGGIKRHNFRRGPMTHGSKSHRALGSIGAGTTPGRVYKGKKMPGRMGGTKTKVRK 350
           IGKGFQGGIKRHNF+RGPM+HGSKSHRALGSIGAGTTPGRVYKGKKMPGRMGGTK K+RK
Sbjct: 193 IGKGFQGGIKRHNFKRGPMSHGSKSHRALGSIGAGTTPGRVYKGKKMPGRMGGTKRKIRK 252

Query: 349 LKIIKIDTELRVVMIKGAVPGKPGNLLRITPAKIVGKNIPKN 224
           LKI+KID +L VVMIKGAVPGKPGNLLRI PAKIVG+NIPK+
Sbjct: 253 LKIVKIDEDLNVVMIKGAVPGKPGNLLRIAPAKIVGQNIPKS 294


>ref|XP_004145066.1| PREDICTED: 50S ribosomal protein L3, chloroplastic-like [Cucumis
           sativus]
          Length = 291

 Score =  394 bits (1013), Expect = e-107
 Identities = 191/222 (86%), Positives = 207/222 (93%)
 Frame = -1

Query: 889 MSMEAGVGVMGTKLGMMSVFEPEGTVVPVTVIGFREGNIVTQVKTPATDGYHAVQVGYRR 710
           MSMEAG+GVM TKLGMMS FEP+G VVPVTV+GF+EGNIVTQVKT ATDGY AVQVGYRR
Sbjct: 70  MSMEAGIGVMATKLGMMSFFEPDGKVVPVTVVGFKEGNIVTQVKTDATDGYSAVQVGYRR 129

Query: 709 VRDRKLTKPELGHLEKAGAIPMRHLQEFRLQSVDGFEPGERLVIEDILKEGDLVDVSGNS 530
           VRDRKLTKPELGHLEKAGAIPMRHLQEFRL+SVD FEP +RLV  ++ KEGDLVDVSG +
Sbjct: 130 VRDRKLTKPELGHLEKAGAIPMRHLQEFRLESVDAFEPNQRLVFNELFKEGDLVDVSGTT 189

Query: 529 IGKGFQGGIKRHNFRRGPMTHGSKSHRALGSIGAGTTPGRVYKGKKMPGRMGGTKTKVRK 350
           IGKGFQGGIKRHNF+RGPM+HGSKSHRALGSIGAGTTPGRVYKGKKMPGRMGGTK K+RK
Sbjct: 190 IGKGFQGGIKRHNFKRGPMSHGSKSHRALGSIGAGTTPGRVYKGKKMPGRMGGTKRKIRK 249

Query: 349 LKIIKIDTELRVVMIKGAVPGKPGNLLRITPAKIVGKNIPKN 224
           LKI+KID +L VVMIKGAVPGKPGNLLRI PAKIVG+NIPK+
Sbjct: 250 LKIVKIDEDLNVVMIKGAVPGKPGNLLRIAPAKIVGQNIPKS 291


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