BLASTX nr result

ID: Dioscorea21_contig00000642 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00000642
         (1414 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004152856.1| PREDICTED: nuclear speckle splicing regulato...   231   5e-58
ref|XP_002312825.1| predicted protein [Populus trichocarpa] gi|2...   225   2e-56
ref|XP_002447879.1| hypothetical protein SORBIDRAFT_06g017370 [S...   220   6e-55
ref|XP_002523868.1| Coiled-coil domain-containing protein, putat...   220   6e-55
ref|XP_003579807.1| PREDICTED: nuclear speckle splicing regulato...   217   5e-54

>ref|XP_004152856.1| PREDICTED: nuclear speckle splicing regulatory protein 1-like
            [Cucumis sativus] gi|449520024|ref|XP_004167034.1|
            PREDICTED: nuclear speckle splicing regulatory protein
            1-like [Cucumis sativus]
          Length = 322

 Score =  231 bits (588), Expect = 5e-58
 Identities = 139/306 (45%), Positives = 176/306 (57%), Gaps = 25/306 (8%)
 Frame = -3

Query: 1319 MSKYGLQLR--QXXXXXXXXXXXXXXXAFAADDDDDVEQEISRQASKNKALQKIEEQHKK 1146
            MSKYGLQLR                   F  DDDDDVE+EISRQASKNKAL+ IEEQHKK
Sbjct: 1    MSKYGLQLRVKPSQQKQPTRPPLPAPLGFQDDDDDDVEREISRQASKNKALKDIEEQHKK 60

Query: 1145 AMEEDPSVFDYDGVYDEMKEKIARPKLEDKSERVPKYIHSLKVAAEKRQRNHEIVFERKL 966
            A+EEDPSVFDYDGVYDEMKEK+ +P+  D+ ER PKYI +L   A++R+R  EI++ERKL
Sbjct: 61   ALEEDPSVFDYDGVYDEMKEKVVQPRAYDREERKPKYIQNLMKKAQEREREQEIIYERKL 120

Query: 965  LKERSKDDHLYADKEKFVTRAYXXXXXXXXXXXXXXXXXQILEEKEDVTKKKDLSDFYFS 786
             KERSKDDHLYA K+KFVT AY                 Q+ EEKEDVTKK D+SDFYFS
Sbjct: 121  AKERSKDDHLYAGKDKFVTGAYKKKLAEQAKWMEEERLRQLREEKEDVTKKSDMSDFYFS 180

Query: 785  LSKNVAFGARAGENAKI--------AKDNQADNHI-QEHQSS---------LPETEVHPN 660
            L KNVA+GAR                K+ Q + HI ++H+ S         L +    P+
Sbjct: 181  LQKNVAYGARNAIEPTAPPKKLQLEKKEKQTEVHILEKHEESCNGDTFNDHLLQNSNLPS 240

Query: 659  SSEGGKEVKGQPEISH-----PQGLPEDAAQVVENTVSEGASVHGNPQAEQASSEQRGER 495
             SE  K ++  P +        +  P +       T+ +   V   P+ EQ+    + + 
Sbjct: 241  CSE--KTIEEHPHLEERLPFSNKTTPSNIEGTSPPTLHDKTPVQEQPKHEQSEQPPKSDH 298

Query: 494  YKRSED 477
            +KR+ED
Sbjct: 299  HKRNED 304


>ref|XP_002312825.1| predicted protein [Populus trichocarpa] gi|222849233|gb|EEE86780.1|
            predicted protein [Populus trichocarpa]
          Length = 321

 Score =  225 bits (574), Expect = 2e-56
 Identities = 128/297 (43%), Positives = 174/297 (58%), Gaps = 16/297 (5%)
 Frame = -3

Query: 1319 MSKYGLQLRQXXXXXXXXXXXXXXXAFAADDDDDVEQEISRQASKNKALQKIEEQHKKAM 1140
            M KYGL LRQ                F  DD+DDVE+EISRQA+KNK+L+ IEEQHKKA+
Sbjct: 1    MKKYGLLLRQPQQKKPPRPPPPTALGFGDDDEDDVEKEISRQAAKNKSLKDIEEQHKKAL 60

Query: 1139 EEDPSVFDYDGVYDEMKEKIARPKLEDKSERVPKYIHSLKVAAEKRQRNHEIVFERKLLK 960
            EEDPSVFDYDGVYDEMK+KIA+PK  D+ +R  KYI +L   AE+R+R H+++FE+ L K
Sbjct: 61   EEDPSVFDYDGVYDEMKQKIAQPKALDRQKRESKYIKTLMGKAEERKRQHDVIFEKNLAK 120

Query: 959  ERSKDDHLYADKEKFVTRAYXXXXXXXXXXXXXXXXXQILEEKEDVTKKKDLSDFYFSLS 780
            ERSK+DHL+ADK+KFVT AY                 ++ EEKEDVTKK DLSDFYF+L 
Sbjct: 121  ERSKEDHLFADKDKFVTAAYKRKLAEQEKWMEEERLRELREEKEDVTKKSDLSDFYFNLG 180

Query: 779  KNVAFGARAGENAKIAKDNQADNHIQEHQSSLPETEVHPNSSEGGKEVKG---------- 630
            KNVA GA+   +    K  + D   +  +   P  +V   +S+G   +            
Sbjct: 181  KNVALGAK---DLLSKKQEKQDKQTEFRKPEKPYDKVAGETSDGNHALTDSKFELDSSSV 237

Query: 629  ----QPEISHPQ--GLPEDAAQVVENTVSEGASVHGNPQAEQASSEQRGERYKRSED 477
                Q E S P+    P D   V +  +S  ++   NP  + ++++   + +KR++D
Sbjct: 238  KEAHQKETSPPRRSSEPLDPEPVSDKPISGTSTEVKNPAEQSSANQPNPDHHKRNQD 294


>ref|XP_002447879.1| hypothetical protein SORBIDRAFT_06g017370 [Sorghum bicolor]
            gi|241939062|gb|EES12207.1| hypothetical protein
            SORBIDRAFT_06g017370 [Sorghum bicolor]
          Length = 312

 Score =  220 bits (561), Expect = 6e-55
 Identities = 130/292 (44%), Positives = 167/292 (57%), Gaps = 11/292 (3%)
 Frame = -3

Query: 1319 MSKYGLQLR----QXXXXXXXXXXXXXXXAFAADDDDDVEQEISRQASKNKALQKIEEQH 1152
            M +YGLQ+R                    AFA DDDDDVE+EI RQA+K +ALQK+EEQ 
Sbjct: 1    MQRYGLQIRTKPPSSSSSRKPPPPARPLAAFADDDDDDVEKEILRQAAKKRALQKVEEQQ 60

Query: 1151 KKAMEEDPSVFDYDGVYDEMKEKIARPKLEDKSERVPKYIHSLKVAAEKRQRNHEIVFER 972
            KKA+EEDPSV+ YD +YDEMKEK ARPK++DK  R  KYI  LK  AE R+R  +I++ER
Sbjct: 61   KKALEEDPSVYAYDELYDEMKEKEARPKMQDKVVRESKYIAQLKEKAELRKREQDIIYER 120

Query: 971  KLLKERSKDDHLYADKEKFVTRAYXXXXXXXXXXXXXXXXXQILEEKEDVTKKKDLSDFY 792
            KL KERSK+DHL+ DK+KFVT AY                 Q+ EEKEDVTKKKDLSDFY
Sbjct: 121  KLQKERSKEDHLFGDKDKFVTSAYRKKLEEQQKWLEEERMRQLREEKEDVTKKKDLSDFY 180

Query: 791  FSLSKNVAFGARAGENAKIAKDNQADNHIQEHQSSLPETEVHPNSSEGGKE----VKGQP 624
            F L +NVAFGAR   N K A   ++DN  ++   S  + E    S +  +E     +G  
Sbjct: 181  FGLERNVAFGARTHGNTKCADPQKSDNQPEDTNPSSLDAEASEPSPKRRRESSVGSEGTK 240

Query: 623  EISHPQGLPEDAAQVVENTVSEGASVHGNPQAEQASSEQ---RGERYKRSED 477
             +  P       +  V +T    A V  N +    +++      + YKR +D
Sbjct: 241  SMEEPSASRTRDSTAVASTEKNAADVPSNAKETPQNTQPVKVTDDHYKRGDD 292


>ref|XP_002523868.1| Coiled-coil domain-containing protein, putative [Ricinus communis]
            gi|223536956|gb|EEF38594.1| Coiled-coil domain-containing
            protein, putative [Ricinus communis]
          Length = 327

 Score =  220 bits (561), Expect = 6e-55
 Identities = 124/260 (47%), Positives = 163/260 (62%), Gaps = 2/260 (0%)
 Frame = -3

Query: 1331 SFIEMSKYGLQLR-QXXXXXXXXXXXXXXXAFAADDDDD-VEQEISRQASKNKALQKIEE 1158
            S ++  KYGLQLR +                F  D+DDD VE+EISR ASKNK+L+ IEE
Sbjct: 9    SEMQQQKYGLQLRVKPQQQAKKPPLPTKPLLFGQDEDDDNVEKEISRHASKNKSLKDIEE 68

Query: 1157 QHKKAMEEDPSVFDYDGVYDEMKEKIARPKLEDKSERVPKYIHSLKVAAEKRQRNHEIVF 978
             HKKA+EEDPS FDYDGVYD+MK+K+A+P+ +D+ ER PKYI +L   AE RQR HEI++
Sbjct: 69   MHKKALEEDPSAFDYDGVYDDMKQKVAQPRHQDRQERKPKYIEALMKKAEIRQREHEIIY 128

Query: 977  ERKLLKERSKDDHLYADKEKFVTRAYXXXXXXXXXXXXXXXXXQILEEKEDVTKKKDLSD 798
            E+KL KER+KDDHLYADK+KFVT AY                 Q+ EEK+DVTKK DLSD
Sbjct: 129  EKKLTKERTKDDHLYADKDKFVTSAYKKKLAEQAKWMEEERLRQLKEEKDDVTKKSDLSD 188

Query: 797  FYFSLSKNVAFGARAGENAKIAKDNQADNHIQEHQSSLPETEVHPNSSEGGKEVKGQPEI 618
            FYF+L KNVAFGA+           + D+  QE Q+ L ++E   + + G    +G+P  
Sbjct: 189  FYFNLGKNVAFGAK-----------EIDSRKQEKQTELRKSEKLDDEAAGSTSGRGRP-- 235

Query: 617  SHPQGLPEDAAQVVENTVSE 558
                 LP+  + +  + V+E
Sbjct: 236  -----LPDSKSIMESSRVNE 250


>ref|XP_003579807.1| PREDICTED: nuclear speckle splicing regulatory protein 1-like
            [Brachypodium distachyon]
          Length = 310

 Score =  217 bits (553), Expect = 5e-54
 Identities = 128/290 (44%), Positives = 167/290 (57%), Gaps = 9/290 (3%)
 Frame = -3

Query: 1319 MSKYGLQLRQXXXXXXXXXXXXXXXAFAA---DDDDDVEQEISRQASKNKALQKIEEQHK 1149
            M +YGLQLR                  AA   DDDDDVE +I RQ+SK +ALQK+EE  K
Sbjct: 1    MQRYGLQLRTKPAASSSSRPPPPARPIAAFADDDDDDVEADILRQSSKKRALQKVEELQK 60

Query: 1148 KAMEEDPSVFDYDGVYDEMKEKIARPKLEDKSERVPKYIHSLKVAAEKRQRNHEIVFERK 969
            KA+EEDPSVF YD VYD+MKEK ARPK++ K  R  KYI +LK  AE+R+R  +IV+ERK
Sbjct: 61   KAIEEDPSVFAYDDVYDDMKEKAARPKIQAKVVRQSKYIEALKEKAEQRKREQDIVYERK 120

Query: 968  LLKERSKDDHLYADKEKFVTRAYXXXXXXXXXXXXXXXXXQILEEKEDVTKKKDLSDFYF 789
            L KERSK+DHL+ADK+KFVT AY                 Q+ EEK+DVTKKKDLSDFYF
Sbjct: 121  LHKERSKEDHLFADKDKFVTSAYRKKLEEEQKWLEEERRRQLQEEKDDVTKKKDLSDFYF 180

Query: 788  SLSKNVAFGARAGENAKIAKDNQADNHIQEHQSSLPETEVHPNSSEGGKEVKGQPEISHP 609
             L+KNVAFGAR  +  +  +  + DN++++ ++S  + E    S +  +E     E +H 
Sbjct: 181  GLAKNVAFGARTHDGTEQVEPEKLDNNVEDIRTSKSDAEGSGRSPKRMRESSVGSEKAHE 240

Query: 608  QGLPEDAA------QVVENTVSEGASVHGNPQAEQASSEQRGERYKRSED 477
                E+ A       +   +  + A V          +    E YKRS D
Sbjct: 241  SRSVEEPATTGSRDSMAATSTEKDADVAPTASQVPQPAPVTDEHYKRSTD 290


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