BLASTX nr result

ID: Dioscorea21_contig00000625 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00000625
         (481 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002338573.1| early light-inducible protein [Populus trich...   119   3e-25
ref|XP_002312552.1| early light-inducible protein [Populus trich...   118   4e-25
gb|ADV19257.1| putative cold-inducible protein-like protein [Hel...   117   1e-24
gb|ABK94838.1| unknown [Populus trichocarpa]                          117   1e-24
gb|AAO33591.1|AF479309_1 putative early light induced protein [A...   116   2e-24

>ref|XP_002338573.1| early light-inducible protein [Populus trichocarpa]
           gi|118488109|gb|ABK95874.1| unknown [Populus
           trichocarpa] gi|222872878|gb|EEF10009.1| early
           light-inducible protein [Populus trichocarpa]
          Length = 182

 Score =  119 bits (297), Expect = 3e-25
 Identities = 70/156 (44%), Positives = 98/156 (62%), Gaps = 3/156 (1%)
 Frame = +1

Query: 22  MATSATVQSYMA--IFRPQVGAKSHLATLSSLHLRPRQRVASTTLVRCQAEPEKPAVETE 195
           MATS  +Q+ +A  +    V  +S ++ L S    PR R +++  ++C+AE ++  +  E
Sbjct: 1   MATSTVMQTVLASPVASSLVKNRSRVSNLFSATYVPRLRGSASKRLQCKAELDEQKMSAE 60

Query: 196 -TPTPQTVLXXXXXXXXXXXXXXXXXXXXXFSDVLAFSGPAPERINGRLAMIGFVAALAV 372
            +P P+  +                     F+DVLAFSGPAPERINGRLAMIGFVAA+AV
Sbjct: 61  PSPPPKPKVSTK------------------FADVLAFSGPAPERINGRLAMIGFVAAMAV 102

Query: 373 EAARGQDLVEQLMNGGLPWFLGTAVLFSVASLVPLF 480
           E ++GQDL  Q+ NGG+ WF+GT++L SVASLVPLF
Sbjct: 103 ELSKGQDLFSQISNGGVSWFVGTSILLSVASLVPLF 138


>ref|XP_002312552.1| early light-inducible protein [Populus trichocarpa]
           gi|222852372|gb|EEE89919.1| early light-inducible
           protein [Populus trichocarpa]
          Length = 182

 Score =  118 bits (296), Expect = 4e-25
 Identities = 69/156 (44%), Positives = 98/156 (62%), Gaps = 3/156 (1%)
 Frame = +1

Query: 22  MATSATVQSYMA--IFRPQVGAKSHLATLSSLHLRPRQRVASTTLVRCQAEPEKPAVETE 195
           MATS  +Q+ +A  +    V  +S ++ L S    PR R +++  ++C+AE ++  +  E
Sbjct: 1   MATSTVMQTVLASPVASSLVKNRSRVSNLFSATYVPRLRGSASKRLQCKAELDEQKMSAE 60

Query: 196 -TPTPQTVLXXXXXXXXXXXXXXXXXXXXXFSDVLAFSGPAPERINGRLAMIGFVAALAV 372
            +P P+  +                     F+DVLAFSGPAPERINGRLAMIGFVAA+AV
Sbjct: 61  PSPPPKPKVSTK------------------FADVLAFSGPAPERINGRLAMIGFVAAMAV 102

Query: 373 EAARGQDLVEQLMNGGLPWFLGTAVLFSVASLVPLF 480
           E ++GQDL  Q+ NGG+ WF+GT++L SVASL+PLF
Sbjct: 103 ELSKGQDLFSQISNGGVSWFVGTSILLSVASLIPLF 138


>gb|ADV19257.1| putative cold-inducible protein-like protein [Helleborus
           orientalis]
          Length = 148

 Score =  117 bits (293), Expect = 1e-24
 Identities = 62/120 (51%), Positives = 75/120 (62%)
 Frame = +1

Query: 121 PRQRVASTTLVRCQAEPEKPAVETETPTPQTVLXXXXXXXXXXXXXXXXXXXXXFSDVLA 300
           PRQ+ +    VRC AE + P   T  P P+                        FSDVLA
Sbjct: 2   PRQQRSGCMQVRCMAEEKLPEQSTPPPAPKV-----------------NKVITRFSDVLA 44

Query: 301 FSGPAPERINGRLAMIGFVAALAVEAARGQDLVEQLMNGGLPWFLGTAVLFSVASLVPLF 480
           FSGPAPERINGRLAMIGFVAA+A E A+G D+V Q+ NGGLPWF+GT+V+ + ASL+PLF
Sbjct: 45  FSGPAPERINGRLAMIGFVAAIAAELAKGDDVVAQIANGGLPWFVGTSVVLTFASLIPLF 104


>gb|ABK94838.1| unknown [Populus trichocarpa]
          Length = 182

 Score =  117 bits (292), Expect = 1e-24
 Identities = 69/156 (44%), Positives = 97/156 (62%), Gaps = 3/156 (1%)
 Frame = +1

Query: 22  MATSATVQSYMA--IFRPQVGAKSHLATLSSLHLRPRQRVASTTLVRCQAEPEKPAVETE 195
           MATS  +Q+ +A  +    V  +S ++ L S    PR R ++   ++C+AE ++  +  E
Sbjct: 1   MATSTVMQTVLASPVASSLVKNRSRVSNLFSATYVPRLRGSAGKRLQCKAELDEQNMSAE 60

Query: 196 -TPTPQTVLXXXXXXXXXXXXXXXXXXXXXFSDVLAFSGPAPERINGRLAMIGFVAALAV 372
            +P P+  +                     F+DVLAFSGPAPERINGRLAMIGFVAA+AV
Sbjct: 61  PSPPPKPKVSTK------------------FADVLAFSGPAPERINGRLAMIGFVAAMAV 102

Query: 373 EAARGQDLVEQLMNGGLPWFLGTAVLFSVASLVPLF 480
           E ++GQDL  Q+ NGG+ WF+GT++L SVASL+PLF
Sbjct: 103 ELSKGQDLFSQISNGGVSWFVGTSILLSVASLIPLF 138


>gb|AAO33591.1|AF479309_1 putative early light induced protein [Arachis hypogaea]
          Length = 189

 Score =  116 bits (290), Expect = 2e-24
 Identities = 64/120 (53%), Positives = 76/120 (63%)
 Frame = +1

Query: 121 PRQRVASTTLVRCQAEPEKPAVETETPTPQTVLXXXXXXXXXXXXXXXXXXXXXFSDVLA 300
           P  R  ++  VR  AE E+    TE  +P T                       FSDVLA
Sbjct: 36  PNMRRNASLSVRSMAEEEQKEQSTEPTSPVT-------PPPPKPQPRSPKMSTKFSDVLA 88

Query: 301 FSGPAPERINGRLAMIGFVAALAVEAARGQDLVEQLMNGGLPWFLGTAVLFSVASLVPLF 480
           FSGPAPERINGRLAMIGFVAALAVE + GQDL+ Q+ NGG+PWFLGT+V+ S+ASL+PLF
Sbjct: 89  FSGPAPERINGRLAMIGFVAALAVELSNGQDLLSQISNGGIPWFLGTSVVLSLASLIPLF 148


Top