BLASTX nr result

ID: Dioscorea21_contig00000624 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00000624
         (1190 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002315962.1| predicted protein [Populus trichocarpa] gi|2...   464   e-128
emb|CBI27075.3| unnamed protein product [Vitis vinifera]              454   e-125
ref|XP_002281301.1| PREDICTED: coiled-coil domain-containing pro...   454   e-125
ref|XP_002524399.1| Coiled-coil domain-containing protein, putat...   454   e-125
ref|XP_002311431.1| predicted protein [Populus trichocarpa] gi|2...   454   e-125

>ref|XP_002315962.1| predicted protein [Populus trichocarpa] gi|222865002|gb|EEF02133.1|
           predicted protein [Populus trichocarpa]
          Length = 313

 Score =  464 bits (1193), Expect = e-128
 Identities = 234/311 (75%), Positives = 257/311 (82%), Gaps = 1/311 (0%)
 Frame = +1

Query: 67  MSSLAAARADNFYYPPEWTPKQGSLNKFHGQHALRERARKLDQGILIIRFEMPYNIWCGG 246
           MSSLAAARADNFYYPPEW+PK+G LNKFHGQHALRERARKLDQGILIIRFEMP+NIWCGG
Sbjct: 1   MSSLAAARADNFYYPPEWSPKKGGLNKFHGQHALRERARKLDQGILIIRFEMPFNIWCGG 60

Query: 247 CNSMIAKGVRFNAEKKQVGNYYSTKIWSFTMKSACCKHEIVIQTDPKNCEYVIISGAQKK 426
           CNSMIAKGVRFNAEKKQVGNYYSTKIWSFTMKSACCKHEIVIQTDPKNCEYVIISGAQ+K
Sbjct: 61  CNSMIAKGVRFNAEKKQVGNYYSTKIWSFTMKSACCKHEIVIQTDPKNCEYVIISGAQRK 120

Query: 427 TEEFDIEDAETFALPADEERGKLSDPFYRLEHQEEDLRKKKEAEPLLVRLQKVTDSRHSD 606
            EEFDIEDAETFALPADEERGKL+DPFYRLEHQEEDL+KKKEAEP+LVRLQ+V+D+RH D
Sbjct: 121 NEEFDIEDAETFALPADEERGKLADPFYRLEHQEEDLQKKKEAEPILVRLQRVSDARHLD 180

Query: 607 DYXXXXXXXXXXXGQKRKVAEEEAASRKLGLGIRLLPPSTEDGATAAKVKFASKFEKNMK 786
           DY            QK++VAEEEA S+K+GLGIRLLP + EDGA+AA VKF+SKF+KN K
Sbjct: 181 DYSLNKALRAQMRSQKKRVAEEEATSKKMGLGIRLLPTTEEDGASAAHVKFSSKFDKNRK 240

Query: 787 DKRXXXXXXXXXXXXXXXXXGNKLS-ELESKRRKIKASTASALLTGRVKPSSWVQQSHTS 963
           DKR                  NK   ELESKRRKI AS AS LLTG  KPSSW   S  +
Sbjct: 241 DKRALISADSIFSGSSGSSMSNKKRLELESKRRKISASAASNLLTGGFKPSSW---SQGT 297

Query: 964 LSAARSGRNSV 996
           +S +R  +NS+
Sbjct: 298 VSGSRHKQNSM 308


>emb|CBI27075.3| unnamed protein product [Vitis vinifera]
          Length = 885

 Score =  454 bits (1168), Expect = e-125
 Identities = 227/300 (75%), Positives = 250/300 (83%), Gaps = 1/300 (0%)
 Frame = +1

Query: 67   MSSLAAARADNFYYPPEWTPKQGSLNKFHGQHALRERARKLDQGILIIRFEMPYNIWCGG 246
            MSSLAAARADNFYYPPEWTP QGSLNKFHGQHALRERARK+DQGILIIRFEMP+NIWCGG
Sbjct: 573  MSSLAAARADNFYYPPEWTPNQGSLNKFHGQHALRERARKIDQGILIIRFEMPFNIWCGG 632

Query: 247  CNSMIAKGVRFNAEKKQVGNYYSTKIWSFTMKSACCKHEIVIQTDPKNCEYVIISGAQKK 426
            CNSMIAKGVRFNAEKKQVGNYYSTKIWSFTMKSACCKHEIVIQTDPKNCEYVIISGAQ+K
Sbjct: 633  CNSMIAKGVRFNAEKKQVGNYYSTKIWSFTMKSACCKHEIVIQTDPKNCEYVIISGAQRK 692

Query: 427  TEEFDIEDAETFALPADEERGKLSDPFYRLEHQEEDLRKKKEAEPLLVRLQKVTDSRHSD 606
            TEEFDIEDAETFALPADEERGKL+DPFYRLEH+ EDL+KKKEAEP+LVRLQ+V+D+RHSD
Sbjct: 693  TEEFDIEDAETFALPADEERGKLADPFYRLEHEGEDLQKKKEAEPVLVRLQRVSDARHSD 752

Query: 607  DYXXXXXXXXXXXGQKRKVAEEEAASRKLGLGIRLLPPSTEDGATAAKVKFASKFEKNMK 786
            DY            QK++VAEEE  S+KLGLGIRLLP + ED A AA++KF+SKFE+N K
Sbjct: 753  DYSLNKALRAQLRNQKKRVAEEEFVSKKLGLGIRLLPATEEDAAIAARMKFSSKFERNRK 812

Query: 787  DKRXXXXXXXXXXXXXXXXXGNKLS-ELESKRRKIKASTASALLTGRVKPSSWVQQSHTS 963
            +KR                  +K   EL SKRRKIKA TAS LLT   KPSSW++ S +S
Sbjct: 813  EKRALINAASIFPGSSGSSLSDKKRLELGSKRRKIKAGTASELLTRGFKPSSWLKSSVSS 872


>ref|XP_002281301.1| PREDICTED: coiled-coil domain-containing protein 130-like [Vitis
           vinifera]
          Length = 313

 Score =  454 bits (1168), Expect = e-125
 Identities = 227/300 (75%), Positives = 250/300 (83%), Gaps = 1/300 (0%)
 Frame = +1

Query: 67  MSSLAAARADNFYYPPEWTPKQGSLNKFHGQHALRERARKLDQGILIIRFEMPYNIWCGG 246
           MSSLAAARADNFYYPPEWTP QGSLNKFHGQHALRERARK+DQGILIIRFEMP+NIWCGG
Sbjct: 1   MSSLAAARADNFYYPPEWTPNQGSLNKFHGQHALRERARKIDQGILIIRFEMPFNIWCGG 60

Query: 247 CNSMIAKGVRFNAEKKQVGNYYSTKIWSFTMKSACCKHEIVIQTDPKNCEYVIISGAQKK 426
           CNSMIAKGVRFNAEKKQVGNYYSTKIWSFTMKSACCKHEIVIQTDPKNCEYVIISGAQ+K
Sbjct: 61  CNSMIAKGVRFNAEKKQVGNYYSTKIWSFTMKSACCKHEIVIQTDPKNCEYVIISGAQRK 120

Query: 427 TEEFDIEDAETFALPADEERGKLSDPFYRLEHQEEDLRKKKEAEPLLVRLQKVTDSRHSD 606
           TEEFDIEDAETFALPADEERGKL+DPFYRLEH+ EDL+KKKEAEP+LVRLQ+V+D+RHSD
Sbjct: 121 TEEFDIEDAETFALPADEERGKLADPFYRLEHEGEDLQKKKEAEPVLVRLQRVSDARHSD 180

Query: 607 DYXXXXXXXXXXXGQKRKVAEEEAASRKLGLGIRLLPPSTEDGATAAKVKFASKFEKNMK 786
           DY            QK++VAEEE  S+KLGLGIRLLP + ED A AA++KF+SKFE+N K
Sbjct: 181 DYSLNKALRAQLRNQKKRVAEEEFVSKKLGLGIRLLPATEEDAAIAARMKFSSKFERNRK 240

Query: 787 DKRXXXXXXXXXXXXXXXXXGNKLS-ELESKRRKIKASTASALLTGRVKPSSWVQQSHTS 963
           +KR                  +K   EL SKRRKIKA TAS LLT   KPSSW++ S +S
Sbjct: 241 EKRALINAASIFPGSSGSSLSDKKRLELGSKRRKIKAGTASELLTRGFKPSSWLKSSVSS 300


>ref|XP_002524399.1| Coiled-coil domain-containing protein, putative [Ricinus communis]
           gi|223536360|gb|EEF38010.1| Coiled-coil
           domain-containing protein, putative [Ricinus communis]
          Length = 310

 Score =  454 bits (1168), Expect = e-125
 Identities = 225/308 (73%), Positives = 255/308 (82%), Gaps = 1/308 (0%)
 Frame = +1

Query: 67  MSSLAAARADNFYYPPEWTPKQGSLNKFHGQHALRERARKLDQGILIIRFEMPYNIWCGG 246
           MSSLAAARADNFYYPPEW+PK+G LNKFHGQHALRERARK+DQGILIIRFEMP+NIWCGG
Sbjct: 1   MSSLAAARADNFYYPPEWSPKKGGLNKFHGQHALRERARKIDQGILIIRFEMPFNIWCGG 60

Query: 247 CNSMIAKGVRFNAEKKQVGNYYSTKIWSFTMKSACCKHEIVIQTDPKNCEYVIISGAQKK 426
           CNSMIAKGVRFNAEKKQVGNYYSTKIWSFTMKSACCKHEIVIQTDPKNCEYVIISGAQKK
Sbjct: 61  CNSMIAKGVRFNAEKKQVGNYYSTKIWSFTMKSACCKHEIVIQTDPKNCEYVIISGAQKK 120

Query: 427 TEEFDIEDAETFALPADEERGKLSDPFYRLEHQEEDLRKKKEAEPLLVRLQKVTDSRHSD 606
           TE+FD+EDAETFALPADEERGKLSDPFYRLEHQEEDL+KKKEAEP++VRLQ+V+D+RHSD
Sbjct: 121 TEDFDVEDAETFALPADEERGKLSDPFYRLEHQEEDLQKKKEAEPVIVRLQRVSDARHSD 180

Query: 607 DYXXXXXXXXXXXGQKRKVAEEEAASRKLGLGIRLLPPSTEDGATAAKVKFASKFEKNMK 786
           DY            QK++V+EEEA SRK+GLG+RLLP + ED  TAA +KF+SKFE+N +
Sbjct: 181 DYALNKALRARLRSQKKRVSEEEATSRKMGLGVRLLPVTKEDATTAAHMKFSSKFERNRR 240

Query: 787 DKRXXXXXXXXXXXXXXXXXGN-KLSELESKRRKIKASTASALLTGRVKPSSWVQQSHTS 963
           DKR                  N KL +LE+KRRKI A  AS LLTG  +PSS +Q + +S
Sbjct: 241 DKRALINAASIFPESSRASLPNKKLLDLEAKRRKISAVAASNLLTGGFRPSSLLQGAVSS 300

Query: 964 LSAARSGR 987
           +   +S R
Sbjct: 301 IRHKQSSR 308


>ref|XP_002311431.1| predicted protein [Populus trichocarpa] gi|222851251|gb|EEE88798.1|
           predicted protein [Populus trichocarpa]
          Length = 313

 Score =  454 bits (1168), Expect = e-125
 Identities = 227/311 (72%), Positives = 254/311 (81%), Gaps = 1/311 (0%)
 Frame = +1

Query: 67  MSSLAAARADNFYYPPEWTPKQGSLNKFHGQHALRERARKLDQGILIIRFEMPYNIWCGG 246
           MSSLAAARADNFYYPPEW+PK+G LNKFHGQHALRERARKLDQGILIIRFEMP+NIWCGG
Sbjct: 1   MSSLAAARADNFYYPPEWSPKKGGLNKFHGQHALRERARKLDQGILIIRFEMPFNIWCGG 60

Query: 247 CNSMIAKGVRFNAEKKQVGNYYSTKIWSFTMKSACCKHEIVIQTDPKNCEYVIISGAQKK 426
           CNSMIAKGVRFNAEKKQVGNYYSTKIWSFTMKSACCKHEIVI TDPKNCEYVIISGAQ+K
Sbjct: 61  CNSMIAKGVRFNAEKKQVGNYYSTKIWSFTMKSACCKHEIVIHTDPKNCEYVIISGAQRK 120

Query: 427 TEEFDIEDAETFALPADEERGKLSDPFYRLEHQEEDLRKKKEAEPLLVRLQKVTDSRHSD 606
            EEFD+EDAETFALPADEE+GKLSDPFYRLEHQEEDL+KKKEAEP+LVRLQ+V+D+RHSD
Sbjct: 121 NEEFDVEDAETFALPADEEKGKLSDPFYRLEHQEEDLQKKKEAEPVLVRLQRVSDARHSD 180

Query: 607 DYXXXXXXXXXXXGQKRKVAEEEAASRKLGLGIRLLPPSTEDGATAAKVKFASKFEKNMK 786
           DY             K++VAEEE+ SRK+GLGIRLLP + ED  +AA VKF+SKF+KN K
Sbjct: 181 DYALNKALRARMRSHKKRVAEEESTSRKMGLGIRLLPATEEDAVSAAHVKFSSKFDKNRK 240

Query: 787 DKRXXXXXXXXXXXXXXXXXGNKLS-ELESKRRKIKASTASALLTGRVKPSSWVQQSHTS 963
           DKR                  NK   ELESKRRKI A+ A+ LLTG  KPSSW   S  +
Sbjct: 241 DKRALISAASIFPGSSGSSMSNKKRLELESKRRKISAAAATNLLTGGFKPSSW---SQGT 297

Query: 964 LSAARSGRNSV 996
           +S ++  +NS+
Sbjct: 298 VSCSKRKQNSM 308


Top