BLASTX nr result

ID: Dioscorea21_contig00000617 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00000617
         (3181 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002270340.2| PREDICTED: uncharacterized protein LOC100232...   607   e-171
ref|XP_002526479.1| RNA binding protein, putative [Ricinus commu...   462   e-127
ref|XP_002302501.1| predicted protein [Populus trichocarpa] gi|2...   461   e-127
gb|AEV43360.1| RNA recognition motif protein 1 [Citrus sinensis]      458   e-126
ref|XP_003530116.1| PREDICTED: uncharacterized protein LOC100777...   457   e-125

>ref|XP_002270340.2| PREDICTED: uncharacterized protein LOC100232913 [Vitis vinifera]
            gi|297734640|emb|CBI16691.3| unnamed protein product
            [Vitis vinifera]
          Length = 812

 Score =  607 bits (1566), Expect = e-171
 Identities = 322/537 (59%), Positives = 374/537 (69%), Gaps = 1/537 (0%)
 Frame = +3

Query: 627  KERRKRKEFEVFVGGLDKDAKESDLRKVFSAVGEIVEIRLMMNHLTNRNKGFAFLRYATV 806
            KERRKRKEFEVFVGGLDKDA E DLRKVFS VGE+ E+RLMMN  T +NKGFAFLR+ATV
Sbjct: 224  KERRKRKEFEVFVGGLDKDATEDDLRKVFSQVGEVTEVRLMMNPQTKKNKGFAFLRFATV 283

Query: 807  EQAKRAVLELKNPVVNGKQCGVAPSKDSDTLFLGNICKTWTKEHLKETLRSYGIENFVDL 986
            EQAKRAV ELKNPVVNGKQCGV PS+DSDTLFLGNICKTWTKE LKE L+ YG+EN  DL
Sbjct: 284  EQAKRAVTELKNPVVNGKQCGVTPSQDSDTLFLGNICKTWTKEALKEKLKHYGVENVEDL 343

Query: 987  NLSEDSNDEGMNRGFAFLEFSSRRDAIDAYRHLQKRDVMLGVDRPAKISLADSFIQPDDE 1166
             L EDSN+EGMNRGFAFLEFSSR DA+DA++ LQKRDV+ GVDR AK+S ADSFI P DE
Sbjct: 344  TLVEDSNNEGMNRGFAFLEFSSRSDAMDAFKRLQKRDVVFGVDRTAKVSFADSFIDPGDE 403

Query: 1167 VMAQVKTVFVDGIPASWDEDRVKGYLKEFGEIEKIELARNMPNAKRKDFGFVTFDTHDSA 1346
            +MAQVKTVF+DG+PASWDEDRV+  LK++GEIEKIELARNMP+AKRKDFGFVTFDTHD+A
Sbjct: 404  IMAQVKTVFIDGLPASWDEDRVRELLKKYGEIEKIELARNMPSAKRKDFGFVTFDTHDAA 463

Query: 1347 VRCADGINNQELGEGNSKVKVRARLSRPLQRGRGKPGSRGDFRSSRVPLXXXXXXXXXXX 1526
            V CA  INN ELGEG +K KVRARLSRPLQRG+GK  SRGDFR  R              
Sbjct: 464  VTCAKSINNAELGEGENKAKVRARLSRPLQRGKGKHISRGDFRPGRGGPVRGVRGSWARP 523

Query: 1527 XXXXXXXXXXXQLGGRAVTAGGYGSRRTIDFXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 1706
                        LG R   A     +R I F                             
Sbjct: 524  ALRSFPGRGARGLGPRLPPA---AVKRPIGFRDRRPVMAMPPRGRPLPPPSRSYDRRAPV 580

Query: 1707 XXXXXXXXXXXYSRHDELXXXXXXXXXXXEYGSRILTERRSSSYRDEFSSRGSSYSDIVP 1886
                       Y R +E+           +YGSR+  ERR  SYRD++++RGS YSDI P
Sbjct: 581  PAYPKPNLKRDYGRREEV---PLRSRPAVDYGSRVAPERR-PSYRDDYATRGSGYSDI-P 635

Query: 1887 RSAPRAMERRPYADEVYGRKPEW-PIPAYREARSRDYDPISGSKRSYSAMDDAPPRYPDV 2063
            R+  R   RR Y D+ YG++ E  P P+YRE R RDYD I+GSKR Y A+DD PPRY D 
Sbjct: 636  RNTSRTAARRTYEDDAYGQRFERPPPPSYREGRPRDYDSIAGSKRPYGALDDVPPRYADA 695

Query: 2064 NMRHSRARIEYGVSGSSAQYEDAYAERLGRSHAGYGGSRSSLCGHESHGLHGSHQGI 2234
            ++R SRAR++Y +S  ++QY DAY +RLGRS+ GYGGSRSS+   +SHGL+ S QG+
Sbjct: 696  SVRQSRARLDYEMSAGASQYGDAYGDRLGRSNLGYGGSRSSMSSQDSHGLYSSRQGM 752


>ref|XP_002526479.1| RNA binding protein, putative [Ricinus communis]
            gi|223534154|gb|EEF35870.1| RNA binding protein, putative
            [Ricinus communis]
          Length = 784

 Score =  462 bits (1188), Expect = e-127
 Identities = 224/284 (78%), Positives = 252/284 (88%)
 Frame = +3

Query: 627  KERRKRKEFEVFVGGLDKDAKESDLRKVFSAVGEIVEIRLMMNHLTNRNKGFAFLRYATV 806
            KERRKRKEFEVFVGGLDKDA E DLRKVF+ VGE+ E+RLMMN  T +NKGFAFLR++TV
Sbjct: 205  KERRKRKEFEVFVGGLDKDATEDDLRKVFTRVGEVTEVRLMMNPQTKKNKGFAFLRFSTV 264

Query: 807  EQAKRAVLELKNPVVNGKQCGVAPSKDSDTLFLGNICKTWTKEHLKETLRSYGIENFVDL 986
            EQAK+AV ELKNPV+NGKQCGV PS+DSDTLFLGNICKTWTKE LKE L+ YG+EN  D+
Sbjct: 265  EQAKKAVTELKNPVINGKQCGVTPSQDSDTLFLGNICKTWTKEALKEKLKHYGVENVEDV 324

Query: 987  NLSEDSNDEGMNRGFAFLEFSSRRDAIDAYRHLQKRDVMLGVDRPAKISLADSFIQPDDE 1166
             L EDSN+EGMNRGFAFLEFSSR DA+DA++ LQKRDV+ GVDRPAK+S ADSFI P DE
Sbjct: 325  TLVEDSNNEGMNRGFAFLEFSSRSDAMDAFKRLQKRDVLFGVDRPAKVSFADSFIDPGDE 384

Query: 1167 VMAQVKTVFVDGIPASWDEDRVKGYLKEFGEIEKIELARNMPNAKRKDFGFVTFDTHDSA 1346
            +MAQVKTVFVDG+PASWDEDRV+  LK+FGEIEKIELARNMP+AKRKDFGFVTFD+HD+A
Sbjct: 385  IMAQVKTVFVDGLPASWDEDRVRELLKKFGEIEKIELARNMPSAKRKDFGFVTFDSHDAA 444

Query: 1347 VRCADGINNQELGEGNSKVKVRARLSRPLQRGRGKPGSRGDFRS 1478
            V CA  INN ELGEG++K KVRARLSRPLQRG+GK  SR DFRS
Sbjct: 445  VTCAKSINNAELGEGDNKAKVRARLSRPLQRGKGKHASRADFRS 488



 Score =  172 bits (436), Expect = 5e-40
 Identities = 92/167 (55%), Positives = 113/167 (67%), Gaps = 2/167 (1%)
 Frame = +3

Query: 1740 YSRHDELXXXXXXXXXXXEYGSRILTERRSSSYRDEFSSRGSSYSDIVPRSAPRAMERRP 1919
            Y R +EL           +Y SR + ERR S YRD++SSRGS YSDI PR   R+  RR 
Sbjct: 563  YGRREELPPPRSRAPV--DYSSRSVAERRQS-YRDDYSSRGSGYSDI-PRGTSRSSARRA 618

Query: 1920 YADEVYGRKPEWPIPAYREARSRDYDPISGSKRSYSAMDDAPPRYPD--VNMRHSRARIE 2093
            Y D+ YG++ E   P+YRE R+RDYD ISGSKR YSAMDD PPRY D     RHSRAR++
Sbjct: 619  YVDDGYGQRLERHPPSYREGRARDYDSISGSKRPYSAMDDVPPRYADGGAGTRHSRARLD 678

Query: 2094 YGVSGSSAQYEDAYAERLGRSHAGYGGSRSSLCGHESHGLHGSHQGI 2234
            Y +  S++QY DAY +R+GRS  GYGGSRSSL   +SHGL+ S QG+
Sbjct: 679  YELGPSASQYGDAYGDRIGRSSVGYGGSRSSLSSQDSHGLYTSRQGM 725


>ref|XP_002302501.1| predicted protein [Populus trichocarpa] gi|222844227|gb|EEE81774.1|
            predicted protein [Populus trichocarpa]
          Length = 341

 Score =  461 bits (1187), Expect = e-127
 Identities = 224/283 (79%), Positives = 251/283 (88%)
 Frame = +3

Query: 627  KERRKRKEFEVFVGGLDKDAKESDLRKVFSAVGEIVEIRLMMNHLTNRNKGFAFLRYATV 806
            KERRKRKEFEVFVGGLDKDA E DLRK+FS VGE+ E+RLMMN  T +NKGFAFLR+ATV
Sbjct: 24   KERRKRKEFEVFVGGLDKDATEDDLRKIFSRVGEVTEVRLMMNPQTKKNKGFAFLRFATV 83

Query: 807  EQAKRAVLELKNPVVNGKQCGVAPSKDSDTLFLGNICKTWTKEHLKETLRSYGIENFVDL 986
            EQAKRAV ELKNPV+NGKQCGV PS+DSDTLFLGNICKTWTKE LKE L+ YG+EN  DL
Sbjct: 84   EQAKRAVTELKNPVINGKQCGVTPSQDSDTLFLGNICKTWTKEALKEKLKHYGVENVKDL 143

Query: 987  NLSEDSNDEGMNRGFAFLEFSSRRDAIDAYRHLQKRDVMLGVDRPAKISLADSFIQPDDE 1166
             L EDSN+ GMNRGFAFLEFSSR DA+DA++ LQKRDV+ GVDRPAK+S ADSFI P DE
Sbjct: 144  TLVEDSNNAGMNRGFAFLEFSSRSDAMDAFKRLQKRDVLFGVDRPAKVSFADSFIDPGDE 203

Query: 1167 VMAQVKTVFVDGIPASWDEDRVKGYLKEFGEIEKIELARNMPNAKRKDFGFVTFDTHDSA 1346
            +MAQVKTVF+DG+PASWDEDRV+  LK++GEIEKIELARNMP+A+RKDFGFVTFDTHD+A
Sbjct: 204  IMAQVKTVFIDGLPASWDEDRVRVLLKKYGEIEKIELARNMPSARRKDFGFVTFDTHDAA 263

Query: 1347 VRCADGINNQELGEGNSKVKVRARLSRPLQRGRGKPGSRGDFR 1475
            V CA  INN ELGEG++K KVRARLSRPLQRG+GK  SRGDFR
Sbjct: 264  VTCAKSINNAELGEGDNKAKVRARLSRPLQRGKGKHLSRGDFR 306


>gb|AEV43360.1| RNA recognition motif protein 1 [Citrus sinensis]
          Length = 775

 Score =  458 bits (1179), Expect = e-126
 Identities = 223/286 (77%), Positives = 250/286 (87%)
 Frame = +3

Query: 627  KERRKRKEFEVFVGGLDKDAKESDLRKVFSAVGEIVEIRLMMNHLTNRNKGFAFLRYATV 806
            +ERRKRKEFEVFVGGLDKD    DLRKVFS VGE+ E+RLMMN  T +NKGFAFLR+ATV
Sbjct: 189  QERRKRKEFEVFVGGLDKDVVGDDLRKVFSQVGEVTEVRLMMNPQTKKNKGFAFLRFATV 248

Query: 807  EQAKRAVLELKNPVVNGKQCGVAPSKDSDTLFLGNICKTWTKEHLKETLRSYGIENFVDL 986
            EQA++AV ELKNPV+NGKQCGV PS+DSDTLFLGNICKTWTKE LKE L+ YG++N  DL
Sbjct: 249  EQARQAVTELKNPVINGKQCGVTPSQDSDTLFLGNICKTWTKEALKEKLKHYGVDNVEDL 308

Query: 987  NLSEDSNDEGMNRGFAFLEFSSRRDAIDAYRHLQKRDVMLGVDRPAKISLADSFIQPDDE 1166
             L EDSN+EGMNRGFAFLEFSSR DA+DA++ LQKRDV+ GVDRPAK+S ADSFI P DE
Sbjct: 309  TLVEDSNNEGMNRGFAFLEFSSRSDAMDAFKRLQKRDVLFGVDRPAKVSFADSFIDPGDE 368

Query: 1167 VMAQVKTVFVDGIPASWDEDRVKGYLKEFGEIEKIELARNMPNAKRKDFGFVTFDTHDSA 1346
            +MAQVKTVFVDG+PASWDEDRV+  LK +GEI KIELARNMP+AKRKDFGFVTFDTHD+A
Sbjct: 369  IMAQVKTVFVDGLPASWDEDRVRELLKNYGEITKIELARNMPSAKRKDFGFVTFDTHDAA 428

Query: 1347 VRCADGINNQELGEGNSKVKVRARLSRPLQRGRGKPGSRGDFRSSR 1484
            V CA  INN ELGEG++K KVRARLSRPLQRG+GK  SRGDFRS R
Sbjct: 429  VTCAKSINNAELGEGDNKAKVRARLSRPLQRGKGKHASRGDFRSGR 474



 Score =  176 bits (447), Expect = 3e-41
 Identities = 86/165 (52%), Positives = 114/165 (69%)
 Frame = +3

Query: 1740 YSRHDELXXXXXXXXXXXEYGSRILTERRSSSYRDEFSSRGSSYSDIVPRSAPRAMERRP 1919
            Y R DE+           +YGSR++ +RR   YRDE++SRGS Y D+ PRS  R   RRP
Sbjct: 557  YGRRDEVPPPRSRAPV--DYGSRVVPDRRP--YRDEYTSRGSGYPDM-PRSTSRGAARRP 611

Query: 1920 YADEVYGRKPEWPIPAYREARSRDYDPISGSKRSYSAMDDAPPRYPDVNMRHSRARIEYG 2099
            Y D+ Y ++ E P P+YRE R+RDY+ +SGSKR YS +DD PPRY D  +RHSRAR++Y 
Sbjct: 612  YVDDGYAQRFERPPPSYREGRARDYETVSGSKRPYSVVDDVPPRYADPGVRHSRARLDYD 671

Query: 2100 VSGSSAQYEDAYAERLGRSHAGYGGSRSSLCGHESHGLHGSHQGI 2234
            + G + QY DAY +R+GRS+ GYGGSRSS+   +SHGL+ S QG+
Sbjct: 672  LGGGAPQYGDAYGDRMGRSNLGYGGSRSSISSQDSHGLYSSRQGM 716


>ref|XP_003530116.1| PREDICTED: uncharacterized protein LOC100777658 [Glycine max]
          Length = 866

 Score =  457 bits (1175), Expect = e-125
 Identities = 235/395 (59%), Positives = 277/395 (70%), Gaps = 3/395 (0%)
 Frame = +3

Query: 309  DKDDAKDAYEGDDKGERLELDDNDPEYEET---AVDYDEKEMEDDDNAQXXXXXXXXXXX 479
            D+++ K++ +  +K ERL+L+DNDPEYE      VDYDEKE+ + D              
Sbjct: 166  DEEEVKESIDEYEKDERLDLEDNDPEYEPEEYGGVDYDEKEL-EQDEGHEVGNEVEEEVA 224

Query: 480  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVKERRKRKEFEV 659
                                                            VKERRKRKEFEV
Sbjct: 225  EDNVGEEGDTGEEEVEDVHDELEGEEEHEHEHEHPDFADVEEEEHREVVKERRKRKEFEV 284

Query: 660  FVGGLDKDAKESDLRKVFSAVGEIVEIRLMMNHLTNRNKGFAFLRYATVEQAKRAVLELK 839
            FVGGLDKDA ESDLRKVF  VG + E+RLMMN  T +NKGFAFLR+ TVEQAKRAV ELK
Sbjct: 285  FVGGLDKDATESDLRKVFGEVGVVTEVRLMMNPQTKKNKGFAFLRFETVEQAKRAVAELK 344

Query: 840  NPVVNGKQCGVAPSKDSDTLFLGNICKTWTKEHLKETLRSYGIENFVDLNLSEDSNDEGM 1019
            NPV+NGKQCGV PS+DSDTL+LGNICKTWTKE LKE L+ YG+ N  DL L ED+NDEG 
Sbjct: 345  NPVINGKQCGVTPSQDSDTLYLGNICKTWTKEALKEKLKHYGVTNVEDLTLVEDTNDEGK 404

Query: 1020 NRGFAFLEFSSRRDAIDAYRHLQKRDVMLGVDRPAKISLADSFIQPDDEVMAQVKTVFVD 1199
            NRGFAFLEF SR +A+DA++ LQ+RDV+ GVD+ AK+S ADSFI P DE+MAQVKTVF+D
Sbjct: 405  NRGFAFLEFPSRSEAMDAFKRLQRRDVVFGVDKLAKVSFADSFIDPGDEIMAQVKTVFID 464

Query: 1200 GIPASWDEDRVKGYLKEFGEIEKIELARNMPNAKRKDFGFVTFDTHDSAVRCADGINNQE 1379
             +P SWDED V+  L+++GEIEKIELARNMP A+RKD+GFVTF THD+AV+CAD I   E
Sbjct: 465  ALPPSWDEDYVRDLLRKYGEIEKIELARNMPAARRKDYGFVTFGTHDAAVKCADSITGTE 524

Query: 1380 LGEGNSKVKVRARLSRPLQRGRGKPGSRGDFRSSR 1484
            LGEG+ K KVRARLSRPLQRGRGK  SRGD+RSSR
Sbjct: 525  LGEGHKKAKVRARLSRPLQRGRGKHSSRGDYRSSR 559



 Score =  147 bits (372), Expect = 1e-32
 Identities = 79/155 (50%), Positives = 104/155 (67%), Gaps = 8/155 (5%)
 Frame = +3

Query: 1794 EYGSRILTERRSSSYRDEFSSRGSSYSDIVPRSAPRAMERRPYADEVYGRK-------PE 1952
            +YGSR+ + RR S YRD + +RG  Y+++ PRS  RA  RR Y D+ YG++       P 
Sbjct: 654  DYGSRVASVRRPS-YRD-YPARGPGYTEL-PRSTSRAAPRRGYVDDGYGQRFERAPPPPP 710

Query: 1953 WPIPAYREARSRDYDPISGSKRSYSAMDDAPPRYPDVNMRHSRARIEYGVSGSSAQYEDA 2132
             P  +YRE R RDYD +SGSKR Y+A+DD PPRY D   R SRAR++Y    S++QY DA
Sbjct: 711  PPHLSYREGRPRDYDALSGSKRPYAAIDDLPPRYADTGARQSRARLDYDYGDSASQYGDA 770

Query: 2133 YAERLGRSHAGY-GGSRSSLCGHESHGLHGSHQGI 2234
            Y +RLGRS  GY GGSRSS+   +SHG++ S QG+
Sbjct: 771  YGDRLGRSSVGYGGGSRSSISSQDSHGMYSSRQGM 805


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