BLASTX nr result

ID: Dioscorea21_contig00000610 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00000610
         (822 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003532158.1| PREDICTED: 40S ribosomal protein S8-like [Gl...   268   1e-69
ref|XP_003551567.1| PREDICTED: 40S ribosomal protein S8 [Glycine...   266   3e-69
gb|ACU16398.1| unknown [Glycine max]                                  266   3e-69
ref|NP_001046866.1| Os02g0489400 [Oryza sativa Japonica Group] g...   266   4e-69
ref|XP_003547779.1| PREDICTED: 40S ribosomal protein S8 [Glycine...   265   7e-69

>ref|XP_003532158.1| PREDICTED: 40S ribosomal protein S8-like [Glycine max]
          Length = 219

 Score =  268 bits (685), Expect = 1e-69
 Identities = 146/218 (66%), Positives = 151/218 (69%)
 Frame = -2

Query: 740 MGISRDSMHXXXXXXXXXXXXXXXXKYELGRQPANTKLSSNKTVRRIRVRGGNVKWRALR 561
           MGISRDSMH                KYELGRQPANTKLSSNKTVRRIRVRGGNVKWRALR
Sbjct: 1   MGISRDSMHKRRATGGKKKSWRKKRKYELGRQPANTKLSSNKTVRRIRVRGGNVKWRALR 60

Query: 560 LDTGNFSWGSEAVTRKTRILDVVYNASNNELVRTQTLVKSAIIQVDAAPFKQWYLQHYGV 381
           LDTGN+SWGSEAVTRKTRILDVVYNASNNELVRTQTLVKSAI+QVDAAPFKQWYLQHYGV
Sbjct: 61  LDTGNYSWGSEAVTRKTRILDVVYNASNNELVRTQTLVKSAIVQVDAAPFKQWYLQHYGV 120

Query: 380 DIGRKKKTPAASXXXXXXXXXXXXXXXXKSNHVXXXXXXXXXXXXXXXXXXXXXXXXXXX 201
           ++GRKKK+ AAS                KSNHV                           
Sbjct: 121 EVGRKKKSAAASVKKEGEDGEAATEEVKKSNHV------------VRKLEKRKQNRVLDP 168

Query: 200 XXXXXXGGGRLFACISSRPGQCGRADGYILEGKELEFY 87
                 GGGRL ACISSRPGQCGRADGYILEGKELEFY
Sbjct: 169 HIEEQFGGGRLLACISSRPGQCGRADGYILEGKELEFY 206


>ref|XP_003551567.1| PREDICTED: 40S ribosomal protein S8 [Glycine max]
          Length = 219

 Score =  266 bits (681), Expect = 3e-69
 Identities = 145/218 (66%), Positives = 150/218 (68%)
 Frame = -2

Query: 740 MGISRDSMHXXXXXXXXXXXXXXXXKYELGRQPANTKLSSNKTVRRIRVRGGNVKWRALR 561
           MGISRDSMH                KYELGRQPANTKLSSNKTVRRIRVRGGNVKWRALR
Sbjct: 1   MGISRDSMHKRRATGGKKKAWRKKRKYELGRQPANTKLSSNKTVRRIRVRGGNVKWRALR 60

Query: 560 LDTGNFSWGSEAVTRKTRILDVVYNASNNELVRTQTLVKSAIIQVDAAPFKQWYLQHYGV 381
           LDTGN+SWGSEA TRKTRILDVVYNASNNELVRTQTLVKSAI+QVDAAPFKQWYLQHYGV
Sbjct: 61  LDTGNYSWGSEAATRKTRILDVVYNASNNELVRTQTLVKSAIVQVDAAPFKQWYLQHYGV 120

Query: 380 DIGRKKKTPAASXXXXXXXXXXXXXXXXKSNHVXXXXXXXXXXXXXXXXXXXXXXXXXXX 201
           ++GRKKK+ AAS                KSNHV                           
Sbjct: 121 EVGRKKKSAAASAKKEGEDGEAATEEVKKSNHV------------LRKLEKRKQNRVLDP 168

Query: 200 XXXXXXGGGRLFACISSRPGQCGRADGYILEGKELEFY 87
                 GGGRL ACISSRPGQCGRADGYILEGKELEFY
Sbjct: 169 HIEEQFGGGRLLACISSRPGQCGRADGYILEGKELEFY 206


>gb|ACU16398.1| unknown [Glycine max]
          Length = 256

 Score =  266 bits (681), Expect = 3e-69
 Identities = 145/218 (66%), Positives = 150/218 (68%)
 Frame = -2

Query: 740 MGISRDSMHXXXXXXXXXXXXXXXXKYELGRQPANTKLSSNKTVRRIRVRGGNVKWRALR 561
           MGISRDSMH                KYELGRQPANTKLSSNKTVRRIRVRGGNVKWRALR
Sbjct: 1   MGISRDSMHKRRATGGKKKAWRKKRKYELGRQPANTKLSSNKTVRRIRVRGGNVKWRALR 60

Query: 560 LDTGNFSWGSEAVTRKTRILDVVYNASNNELVRTQTLVKSAIIQVDAAPFKQWYLQHYGV 381
           LDTGN+SWGSEA TRKTRILDVVYNASNNELVRTQTLVKSAI+QVDAAPFKQWYLQHYGV
Sbjct: 61  LDTGNYSWGSEAATRKTRILDVVYNASNNELVRTQTLVKSAIVQVDAAPFKQWYLQHYGV 120

Query: 380 DIGRKKKTPAASXXXXXXXXXXXXXXXXKSNHVXXXXXXXXXXXXXXXXXXXXXXXXXXX 201
           ++GRKKK+ AAS                KSNHV                           
Sbjct: 121 EVGRKKKSAAASAKKEGEDGEAATEEVKKSNHV------------LRKLEKRKQNRVLDP 168

Query: 200 XXXXXXGGGRLFACISSRPGQCGRADGYILEGKELEFY 87
                 GGGRL ACISSRPGQCGRADGYILEGKELEFY
Sbjct: 169 HIEEQFGGGRLLACISSRPGQCGRADGYILEGKELEFY 206


>ref|NP_001046866.1| Os02g0489400 [Oryza sativa Japonica Group]
           gi|109940162|sp|P49199.2|RS8_ORYSJ RecName: Full=40S
           ribosomal protein S8 gi|47848087|dbj|BAD21871.1|
           putative 40S ribosomal protein S8 [Oryza sativa Japonica
           Group] gi|47848093|dbj|BAD21876.1| putative 40S
           ribosomal protein S8 [Oryza sativa Japonica Group]
           gi|113536397|dbj|BAF08780.1| Os02g0489400 [Oryza sativa
           Japonica Group] gi|215734981|dbj|BAG95703.1| unnamed
           protein product [Oryza sativa Japonica Group]
           gi|218190769|gb|EEC73196.1| hypothetical protein
           OsI_07259 [Oryza sativa Indica Group]
           gi|222622880|gb|EEE57012.1| hypothetical protein
           OsJ_06781 [Oryza sativa Japonica Group]
          Length = 220

 Score =  266 bits (680), Expect = 4e-69
 Identities = 145/218 (66%), Positives = 148/218 (67%)
 Frame = -2

Query: 740 MGISRDSMHXXXXXXXXXXXXXXXXKYELGRQPANTKLSSNKTVRRIRVRGGNVKWRALR 561
           MGISRDSMH                KYELGRQPANTKLSSNKTVRR+RVRGGNVKWRALR
Sbjct: 1   MGISRDSMHKRRATGGKQKAWRKKRKYELGRQPANTKLSSNKTVRRVRVRGGNVKWRALR 60

Query: 560 LDTGNFSWGSEAVTRKTRILDVVYNASNNELVRTQTLVKSAIIQVDAAPFKQWYLQHYGV 381
           LDTGN+SWGSEAVTRKTRILDVVYNASNNELVRTQTLVKSAI+QVDAAPFKQWYL HYGV
Sbjct: 61  LDTGNYSWGSEAVTRKTRILDVVYNASNNELVRTQTLVKSAIVQVDAAPFKQWYLTHYGV 120

Query: 380 DIGRKKKTPAASXXXXXXXXXXXXXXXXKSNHVXXXXXXXXXXXXXXXXXXXXXXXXXXX 201
           DIGRKKK PAA                 KSNHV                           
Sbjct: 121 DIGRKKKAPAAKKDAEGQDAEATTEEAKKSNHV------------VRKLEKRQQGRTLDA 168

Query: 200 XXXXXXGGGRLFACISSRPGQCGRADGYILEGKELEFY 87
                 G GRL ACISSRPGQCGRADGYILEGKELEFY
Sbjct: 169 HIEEQFGSGRLLACISSRPGQCGRADGYILEGKELEFY 206


>ref|XP_003547779.1| PREDICTED: 40S ribosomal protein S8 [Glycine max]
          Length = 219

 Score =  265 bits (678), Expect = 7e-69
 Identities = 145/218 (66%), Positives = 149/218 (68%)
 Frame = -2

Query: 740 MGISRDSMHXXXXXXXXXXXXXXXXKYELGRQPANTKLSSNKTVRRIRVRGGNVKWRALR 561
           MGISRDSMH                KYELGRQPANTKLSSNKTVRRIRVRGGNVKWRALR
Sbjct: 1   MGISRDSMHKRRATGGKKKAWRKKRKYELGRQPANTKLSSNKTVRRIRVRGGNVKWRALR 60

Query: 560 LDTGNFSWGSEAVTRKTRILDVVYNASNNELVRTQTLVKSAIIQVDAAPFKQWYLQHYGV 381
           LDTGN+SWGSEAVTRKTRILDVVYNASNNELVRTQTLVKSAI+QVDAAPFKQWYLQHYGV
Sbjct: 61  LDTGNYSWGSEAVTRKTRILDVVYNASNNELVRTQTLVKSAIVQVDAAPFKQWYLQHYGV 120

Query: 380 DIGRKKKTPAASXXXXXXXXXXXXXXXXKSNHVXXXXXXXXXXXXXXXXXXXXXXXXXXX 201
           +IGRKKKT A                  KSNH+                           
Sbjct: 121 EIGRKKKTAAKKETAEEGAAAVAVEEAKKSNHL------------QRKLEKRQKDRKLDA 168

Query: 200 XXXXXXGGGRLFACISSRPGQCGRADGYILEGKELEFY 87
                 GGGRL ACISSRPGQCGRADGYILEGKELEFY
Sbjct: 169 HIEEQFGGGRLLACISSRPGQCGRADGYILEGKELEFY 206


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