BLASTX nr result

ID: Dioscorea21_contig00000599 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00000599
         (655 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAN60205.1| photosystem II 10 kDa protein [Xerophyta humilis]      200   2e-49
gb|ACZ54010.1| chloroplast photosystem II protein [Wolffia arrhiza]   200   2e-49
gb|ADB08698.1| chloroplast photosystem II 10 kDa protein-like pr...   199   3e-49
gb|ADB08693.1| chloroplast photosystem II 10 kDa protein-like pr...   199   3e-49
ref|XP_002271791.1| PREDICTED: photosystem II 10 kDa polypeptide...   194   2e-47

>gb|AAN60205.1| photosystem II 10 kDa protein [Xerophyta humilis]
          Length = 139

 Score =  200 bits (508), Expect = 2e-49
 Identities = 102/134 (76%), Positives = 110/134 (82%), Gaps = 2/134 (1%)
 Frame = -3

Query: 653 MSSLALKPS-PVIGRSQMKGIPSLARPSSRLNVQASG-KKIKTSQPYGPGGGMKLPDGLD 480
           MSSLALKP+ PV  RS +KG+PSL R SS   VQASG KKIKT+ PYGPGGGM LP GLD
Sbjct: 6   MSSLALKPATPVFERSSVKGLPSLVRSSSSFKVQASGGKKIKTATPYGPGGGMNLPAGLD 65

Query: 479 ASGRKQKGKGVYQFADKYGANVDGYSPIYSPDEWSPSGDVYVGGTTGLLIWAVTXXXXXX 300
           ASGRKQKGKGVYQF DKYGANVDGYSPIYSPDEWSPSGDVYVGGTTGL++WA+T      
Sbjct: 66  ASGRKQKGKGVYQFVDKYGANVDGYSPIYSPDEWSPSGDVYVGGTTGLIVWAITLAGLLG 125

Query: 299 XXXXLVYNTSALAQ 258
               LVY+TSALAQ
Sbjct: 126 GGALLVYSTSALAQ 139


>gb|ACZ54010.1| chloroplast photosystem II protein [Wolffia arrhiza]
          Length = 138

 Score =  200 bits (508), Expect = 2e-49
 Identities = 102/133 (76%), Positives = 110/133 (82%), Gaps = 1/133 (0%)
 Frame = -3

Query: 653 MSSLALKPSPVIGRSQMKGIPSLARPSSRLNVQASG-KKIKTSQPYGPGGGMKLPDGLDA 477
           +SSL+LKPSP+  RS +KG+PSLARP+S L V+ASG KKIKT  P+G GGGMKL DGLDA
Sbjct: 6   ISSLSLKPSPISARSPVKGLPSLARPASGLTVKASGGKKIKTDTPFGIGGGMKLKDGLDA 65

Query: 476 SGRKQKGKGVYQFADKYGANVDGYSPIYSPDEWSPSGDVYVGGTTGLLIWAVTXXXXXXX 297
           SGRK KGKGVYQF DKYGANVDGYSPIYSPDEWSPSGDVYVGG TGLLIWAVT       
Sbjct: 66  SGRKGKGKGVYQFVDKYGANVDGYSPIYSPDEWSPSGDVYVGGKTGLLIWAVTLAGLLAG 125

Query: 296 XXXLVYNTSALAQ 258
              LVYNTSALAQ
Sbjct: 126 GALLVYNTSALAQ 138


>gb|ADB08698.1| chloroplast photosystem II 10 kDa protein-like protein [Wolffia
           arrhiza] gi|339716046|gb|AEJ88270.1| putative
           chloroplast photosystem II 10 kDa protein [Wolffia
           arrhiza]
          Length = 138

 Score =  199 bits (507), Expect = 3e-49
 Identities = 101/133 (75%), Positives = 109/133 (81%), Gaps = 1/133 (0%)
 Frame = -3

Query: 653 MSSLALKPSPVIGRSQMKGIPSLARPSSRLNVQASG-KKIKTSQPYGPGGGMKLPDGLDA 477
           +SSL+LKPSP+  RS +KG+PSLARP+S L V+ASG KKIKT  P+G GGGMKL DGLDA
Sbjct: 6   ISSLSLKPSPISARSPVKGLPSLARPASALTVKASGGKKIKTDTPFGTGGGMKLKDGLDA 65

Query: 476 SGRKQKGKGVYQFADKYGANVDGYSPIYSPDEWSPSGDVYVGGTTGLLIWAVTXXXXXXX 297
           SGRK KGKGVYQF DKYGANVDGYSPIYSPDEWSPSGDVYVGG TGLLIWA T       
Sbjct: 66  SGRKGKGKGVYQFVDKYGANVDGYSPIYSPDEWSPSGDVYVGGKTGLLIWAATLAGLLAG 125

Query: 296 XXXLVYNTSALAQ 258
              LVYNTSALAQ
Sbjct: 126 GALLVYNTSALAQ 138


>gb|ADB08693.1| chloroplast photosystem II 10 kDa protein-like protein [Wolffia
           arrhiza] gi|351066200|gb|AEQ39074.1| putative
           chloroplast photosystem II 10 kDa protein [Wolffia
           arrhiza]
          Length = 138

 Score =  199 bits (507), Expect = 3e-49
 Identities = 101/133 (75%), Positives = 109/133 (81%), Gaps = 1/133 (0%)
 Frame = -3

Query: 653 MSSLALKPSPVIGRSQMKGIPSLARPSSRLNVQASG-KKIKTSQPYGPGGGMKLPDGLDA 477
           +SSL+LKPSP+  RS +KG+PSLARP+S L V+ASG KKIKT  P+G GGGMKL DGLDA
Sbjct: 6   ISSLSLKPSPISARSPVKGLPSLARPASALTVKASGGKKIKTDTPFGTGGGMKLKDGLDA 65

Query: 476 SGRKQKGKGVYQFADKYGANVDGYSPIYSPDEWSPSGDVYVGGTTGLLIWAVTXXXXXXX 297
           SGRK KGKGVYQF DKYGANVDGYSPIYSPDEWSPSGDVYVGG TGLLIWA T       
Sbjct: 66  SGRKGKGKGVYQFVDKYGANVDGYSPIYSPDEWSPSGDVYVGGKTGLLIWAATLAGLLAG 125

Query: 296 XXXLVYNTSALAQ 258
              LVYNTSALAQ
Sbjct: 126 GALLVYNTSALAQ 138


>ref|XP_002271791.1| PREDICTED: photosystem II 10 kDa polypeptide, chloroplastic [Vitis
           vinifera] gi|147789486|emb|CAN71762.1| hypothetical
           protein VITISV_021149 [Vitis vinifera]
           gi|296082806|emb|CBI21811.3| unnamed protein product
           [Vitis vinifera]
          Length = 139

 Score =  194 bits (492), Expect = 2e-47
 Identities = 101/134 (75%), Positives = 108/134 (80%), Gaps = 2/134 (1%)
 Frame = -3

Query: 653 MSSLALKPSPV-IGRSQMKGIPSLARPSSRLNVQASG-KKIKTSQPYGPGGGMKLPDGLD 480
           MSSL+LKPSP  + R  ++G+PSLAR SS   V+ASG KKIKT +PYG GGGMKL DGLD
Sbjct: 6   MSSLSLKPSPFSVERRAVRGLPSLARSSSSFRVEASGGKKIKTDKPYGIGGGMKLSDGLD 65

Query: 479 ASGRKQKGKGVYQFADKYGANVDGYSPIYSPDEWSPSGDVYVGGTTGLLIWAVTXXXXXX 300
           ASGRK KGKGVYQF DKYGANVDGYSPIYSPDEWSP GDVYVGGTTGLLIWAVT      
Sbjct: 66  ASGRKGKGKGVYQFVDKYGANVDGYSPIYSPDEWSPGGDVYVGGTTGLLIWAVTLAGLLL 125

Query: 299 XXXXLVYNTSALAQ 258
               LVYNTSALAQ
Sbjct: 126 GGALLVYNTSALAQ 139


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