BLASTX nr result

ID: Dioscorea21_contig00000591 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00000591
         (1209 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI25128.3| unnamed protein product [Vitis vinifera]              189   1e-45
ref|XP_002276156.1| PREDICTED: F-box protein SKIP22 [Vitis vinif...   189   1e-45
ref|XP_002327736.1| predicted protein [Populus trichocarpa] gi|2...   182   1e-43
gb|ADN33816.1| F-box family protein [Cucumis melo subsp. melo]        174   4e-41
ref|XP_002522106.1| conserved hypothetical protein [Ricinus comm...   167   6e-39

>emb|CBI25128.3| unnamed protein product [Vitis vinifera]
          Length = 508

 Score =  189 bits (480), Expect = 1e-45
 Identities = 116/282 (41%), Positives = 158/282 (56%), Gaps = 19/282 (6%)
 Frame = +3

Query: 30  VDVQDGSDLPEEDVETFVIEKSSSVPCFLKRVLDSEKGVAKGNLGLVVIAVHAVFLESGF 209
           +DV+ G    +ED E  V++KS S PCFL++VL  E G       L+VIAVHAV LESGF
Sbjct: 146 MDVEGGVAAADEDDEPIVVKKSFSEPCFLRKVLREEVGDDGNEHKLLVIAVHAVMLESGF 205

Query: 210 VALDG-SGLK-----LPGGWATAVGTISVSYTLPELI--GSDAEKDAKVAVLKFSLMGNY 365
           V  D  SG++     L   +  A  ++S+ YTLPEL+  G D     +   LKF  +G +
Sbjct: 206 VGFDSVSGMRVDRFHLSEEYPFAAISMSLWYTLPELLDHGCDDSPAIQSVALKFQHLGQF 265

Query: 366 VSIYGFLNGGGSGVHRACXXXXXXXXXXXXXXXXXREMEEE-----------VVFKFWKG 512
           ++IYG L+G  S VH                       EE+            VF+FWK 
Sbjct: 266 INIYGSLSGNRSTVHWVSLDEYRFAPTLDLMWTHSDSAEEKDRGSSNSYPENEVFEFWKI 325

Query: 513 VKDGVSLPLLIDICDKNGXXXXXXXXXXXTDLKIRILELLPGVDLARVGCVNSEMRYLTS 692
           VKDG++LPLL D+C+K G           T+LK++ILELLPGVDL +VGCV SE+ YL+S
Sbjct: 326 VKDGLALPLLTDLCEKGGLLPPPCLMRLPTELKLKILELLPGVDLGKVGCVCSELMYLSS 385

Query: 693 NDELWRKKFLEELGPVNETGGVVARWREKYAMHWLRMKEIKR 818
           N++LW++KF EE G V   G   + W++K+A  W   K+ KR
Sbjct: 386 NNDLWKQKFTEEFGNV-RVGQGFSLWKDKFATWWENRKKRKR 426


>ref|XP_002276156.1| PREDICTED: F-box protein SKIP22 [Vitis vinifera]
            gi|147804806|emb|CAN73524.1| hypothetical protein
            VITISV_010705 [Vitis vinifera]
          Length = 563

 Score =  189 bits (480), Expect = 1e-45
 Identities = 116/282 (41%), Positives = 158/282 (56%), Gaps = 19/282 (6%)
 Frame = +3

Query: 30   VDVQDGSDLPEEDVETFVIEKSSSVPCFLKRVLDSEKGVAKGNLGLVVIAVHAVFLESGF 209
            +DV+ G    +ED E  V++KS S PCFL++VL  E G       L+VIAVHAV LESGF
Sbjct: 208  MDVEGGVAAADEDDEPIVVKKSFSEPCFLRKVLREEVGDDGNEHKLLVIAVHAVMLESGF 267

Query: 210  VALDG-SGLK-----LPGGWATAVGTISVSYTLPELI--GSDAEKDAKVAVLKFSLMGNY 365
            V  D  SG++     L   +  A  ++S+ YTLPEL+  G D     +   LKF  +G +
Sbjct: 268  VGFDSVSGMRVDRFHLSEEYPFAAISMSLWYTLPELLDHGCDDSPAIQSVALKFQHLGQF 327

Query: 366  VSIYGFLNGGGSGVHRACXXXXXXXXXXXXXXXXXREMEEE-----------VVFKFWKG 512
            ++IYG L+G  S VH                       EE+            VF+FWK 
Sbjct: 328  INIYGSLSGNRSTVHWVSLDEYRFAPTLDLMWTHSDSAEEKDRGSSNSYPENEVFEFWKI 387

Query: 513  VKDGVSLPLLIDICDKNGXXXXXXXXXXXTDLKIRILELLPGVDLARVGCVNSEMRYLTS 692
            VKDG++LPLL D+C+K G           T+LK++ILELLPGVDL +VGCV SE+ YL+S
Sbjct: 388  VKDGLALPLLTDLCEKGGLLPPPCLMRLPTELKLKILELLPGVDLGKVGCVCSELMYLSS 447

Query: 693  NDELWRKKFLEELGPVNETGGVVARWREKYAMHWLRMKEIKR 818
            N++LW++KF EE G V   G   + W++K+A  W   K+ KR
Sbjct: 448  NNDLWKQKFTEEFGNV-RVGQGFSLWKDKFATWWENRKKRKR 488


>ref|XP_002327736.1| predicted protein [Populus trichocarpa] gi|222836821|gb|EEE75214.1|
            predicted protein [Populus trichocarpa]
          Length = 545

 Score =  182 bits (463), Expect = 1e-43
 Identities = 127/353 (35%), Positives = 184/353 (52%), Gaps = 29/353 (8%)
 Frame = +3

Query: 9    EDVETLDVDVQDGSDLPEEDVETFVIEKSSSVPCFLKRVLDSEKGVAKGNLGLVVIAVHA 188
            E +ET ++   +  D+    V+  V  K  S P FL+R+L  E G    N  L+VIAVHA
Sbjct: 193  ETLETQELTSVEAMDVDPGSVD--VGNKRFSEPYFLRRLLRKELGDDGSNYKLLVIAVHA 250

Query: 189  VFLESGFVALDG------SGLKLPGGWATAVGTISVSYTLPELIGSDAEKDAKVAVLKFS 350
            VF+ESGFV  +        G  LP   ++    +S+ YTLPEL+  D++  A+  VLK  
Sbjct: 251  VFIESGFVGFNSISGMRVDGFHLPEEQSSRNLAVSLCYTLPELL--DSKVIAETIVLKLQ 308

Query: 351  LMGNYVSIYGFLNGGGSGVHRACXXXXXXXXXXXXXXXXXRE------------MEEEVV 494
             +G++V++YG L+ GGSG++ A                  +               E  +
Sbjct: 309  SLGHFVNVYGSLSKGGSGLYHARLDINKFVPAIDFVWENDKNDGMNGSDRSSILYPENEI 368

Query: 495  FKFWKGVKDGVSLPLLIDICDKNGXXXXXXXXXXXTDLKIRILELLPGVDLARVGCVNSE 674
            F+FWK VKDG++LPLLIDIC+K G           T+LK++I ELLP +D+A++ CV SE
Sbjct: 369  FEFWKIVKDGLALPLLIDICEKAGLVLPSCLMRLPTELKLKIFELLPAIDIAKMECVCSE 428

Query: 675  MRYLTSNDELWRKKFLEELGPVNETGGVVARWREKYAMHWLRMKEIK------RGRLFLR 836
            MRYL+SN++LW++KF+EE G      G +  W+ ++A +W   K  +        R FL 
Sbjct: 429  MRYLSSNNDLWKQKFVEEFGDGTAAHGTL-NWKARFASYWENKKRKRDFNAWQEYRQFLP 487

Query: 837  PHSSFRRYIR--FGPFTGGRPYITDVDDFGLGP--RSGF-LPQRRRNFSPHCD 980
             H   RR     + P   G  Y   +   G+ P  R G   PQ R NFSP+C+
Sbjct: 488  FHVPIRRDPNPLWCPSIIGGDY-DRLPGLGIPPYRRPGIGWPQPRHNFSPNCN 539


>gb|ADN33816.1| F-box family protein [Cucumis melo subsp. melo]
          Length = 502

 Score =  174 bits (441), Expect = 4e-41
 Identities = 116/312 (37%), Positives = 166/312 (53%), Gaps = 18/312 (5%)
 Frame = +3

Query: 30   VDVQDGSDLPEEDVETFVIEKSSSVPCFLKRVLDSEKGVAKGNLGLVVIAVHAVFLESGF 209
            ++  D  ++  E+  T V+EK  S P FL+RVL  E G  +    L+V AVHAV LESGF
Sbjct: 156  IEESDCEEMEVEEEPTVVVEKKCSRPIFLRRVLKEELGYDRNAHKLLVTAVHAVLLESGF 215

Query: 210  VAL------DGSGLKLPGGWATAVGTISVSYTLPELIGSDAEKDA--KVAVLKFSLMGNY 365
            V +      + S  ++P  W +   T+S+ YTLPEL+    +     +V +LKF  +G +
Sbjct: 216  VLINPNLGFEDSPFRMPEDWPSPSFTMSLWYTLPELLTKRGKNSTMTEVVLLKFQSLGYF 275

Query: 366  VSIYGFLN-GGGSGVHRACXXXXXXXXXXXXXXXXX------REME---EEVVFKFWKGV 515
            V++YG LN   GS V+R                          E E   E+ VF+FWK V
Sbjct: 276  VNVYGSLNCSRGSSVYRVSLDERKFAPNLDLIWVDSVSNYIMDEKEGNPEKQVFEFWKIV 335

Query: 516  KDGVSLPLLIDICDKNGXXXXXXXXXXXTDLKIRILELLPGVDLARVGCVNSEMRYLTSN 695
            KD ++LPLLIDIC+K G            D+K++ILE LPGVD+ARV CV +E+RYL S+
Sbjct: 336  KDALALPLLIDICEKTGLPPPASFMLLPADVKLKILEALPGVDIARVECVCTELRYLASS 395

Query: 696  DELWRKKFLEELGPVNETGGVVARWREKYAMHWLRMKEIKRGRLFLRPHSSFRRYIRFGP 875
            +ELW+ KF +E G  +   G    W+ K+  ++ R K+  R    +R   SF R+ R  P
Sbjct: 396  NELWKMKFNQEFGLEDGVSGNRV-WKTKFVEYYEREKQRNRRTSNMRDAISFGRH-RRPP 453

Query: 876  FTGGRPYITDVD 911
            +    P+I   D
Sbjct: 454  YPFPVPHIIGGD 465


>ref|XP_002522106.1| conserved hypothetical protein [Ricinus communis]
            gi|223538705|gb|EEF40306.1| conserved hypothetical
            protein [Ricinus communis]
          Length = 523

 Score =  167 bits (422), Expect = 6e-39
 Identities = 131/351 (37%), Positives = 178/351 (50%), Gaps = 32/351 (9%)
 Frame = +3

Query: 42   DGSDLPEEDVETFVIEKSSSVPCFLKRVLDSEK-GVAKGNLGLVVIAVHAVFLESGFVAL 218
            D  D+  E  +  V  K  S PCFLKRVL  E   V   +  L+ IA+HAVFLESGFV  
Sbjct: 174  DDMDVGTESADVDVKSKRISEPCFLKRVLGEEDFAVDFSDNKLLFIAIHAVFLESGFVGF 233

Query: 219  DG-SGLK-----LPGGWATAVGTISVSYTLPELIGSDAEKDAKVAVLKFSLMGNYVSIYG 380
            D  SGL+     L         T SVSYTLPEL+ +D   D+   VLKF  +G +V++YG
Sbjct: 234  DSVSGLRVDLFHLLQEQPLMNFTTSVSYTLPELLDNDNVIDS--VVLKFQTLGQFVNVYG 291

Query: 381  FLNGGGSGVHRACXXXXXXXXXXXXXXXXXREME---------EEVVFKFWKGVKDGVSL 533
             +    S V+R+C                  + +         E VVF+ WK VKD ++L
Sbjct: 292  SVAKSRSLVYRSCLDKCRYVPAIGSIWITWDKSDTAYENNSYTENVVFELWKIVKDHLAL 351

Query: 534  PLLIDICDKNGXXXXXXXXXXXTDLKIRILELLPGVDLARVGCVNSEMRYLTSNDELWRK 713
            PLLID+C+K G            D+K +ILE LPG+ +AR+ CV  EM+YL+S+++LW++
Sbjct: 352  PLLIDLCEKTGLVLPPCLMRLPADIKHKILESLPGIAIARMACVCKEMQYLSSSNDLWKQ 411

Query: 714  KFLEELGPVNETGGVVARWREKYAMHWLRMKEIKRGRLFLRPHSSFRRYIRFGPF----- 878
            K+ EE G       +V  W+ K+A  W   K+ +R R F+RP      +IR  P+     
Sbjct: 412  KYGEEFGSGTLQQEMV-NWKVKFASSWENRKK-RRKRSFVRPTPV--NFIRSEPYRFMVP 467

Query: 879  --TGGRPYI-TDVDDF-GLGPRSGF-LPQR------RRNFSPHCDFDQHDA 998
               G R  I  D D   GLG    F  P R      RRN SP+C+    +A
Sbjct: 468  PQIGSRIIIGGDYDRLPGLGVPPPFGQPGRNLRNIVRRNISPNCNLGGFNA 518


Top