BLASTX nr result

ID: Dioscorea21_contig00000575 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00000575
         (986 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI27286.3| unnamed protein product [Vitis vinifera]              362   1e-97
ref|XP_002274259.1| PREDICTED: putative pentatricopeptide repeat...   362   1e-97
ref|XP_004144262.1| PREDICTED: putative pentatricopeptide repeat...   355   1e-95
ref|XP_002322859.1| predicted protein [Populus trichocarpa] gi|2...   352   6e-95
ref|XP_003517831.1| PREDICTED: putative pentatricopeptide repeat...   351   2e-94

>emb|CBI27286.3| unnamed protein product [Vitis vinifera]
          Length = 523

 Score =  362 bits (928), Expect = 1e-97
 Identities = 174/313 (55%), Positives = 239/313 (76%)
 Frame = +1

Query: 46   REISKCVRIFDSILKPHFPPLHSIDTLNLVIESLSNRKLVREAKDLVSKLRPSIPPDGDT 225
            RE+ KCV  F  +    +   +S++TLN V+E L   KL  EAK++V KL+  IPP G T
Sbjct: 152  REMKKCVEFFHLMNAHEYG--YSLETLNKVVEVLCRSKLAVEAKEIVLKLKTWIPPSGVT 209

Query: 226  YGILILGFCKIGDLITASKLWNRAVEEGFEPTIEAYEEIIITLFKINRVDDALRMFATLR 405
            YG LI GFC++GDLI A+ +W+  V+EGF P I+A E+++ TLF INR D+A+++F  +R
Sbjct: 210  YGYLIKGFCEVGDLIEAANVWDLMVDEGFRPGIDAVEKMMETLFNINRFDEAMKLFQAVR 269

Query: 406  ARRFGDARADSYRIVIQWMCKLGRVRYAHMVFDEMLKRGLWLAIDNQTVGALVYGLVARN 585
              RF +    +Y +VI WMCK G+V  A+MVF+EMLKRG+    DN+T+ +L+YGL+A+ 
Sbjct: 270  TTRFDELVLSTYSLVIDWMCKRGKVSQAYMVFEEMLKRGI--QPDNKTMSSLIYGLLAKG 327

Query: 586  RVREAYRVVEMVEVPEIGLYHGLMKGLLRLKRAGEATEVFREMVRRGVEPIMHTYVMLLQ 765
            RVREA ++ E +E P+I +YHG++KGLLRL++AGEAT+VFREM+RRG EP MHTY+MLLQ
Sbjct: 328  RVREANKITEGIERPDIAVYHGVIKGLLRLRKAGEATQVFREMIRRGCEPTMHTYIMLLQ 387

Query: 766  GHLGRRGRKGKDGMVNFESVFVGGLVKQGRMVEVSKFVERVMWGGVEVPRFDYNKFLYWF 945
            GHLG++GRKG   +VNF+S+FVGGL+K G+ ++ SK+VER+M GG+EVPRFDYN+FL+ +
Sbjct: 388  GHLGKKGRKGPHPLVNFDSIFVGGLIKVGKSLDASKYVERMMDGGMEVPRFDYNRFLHCY 447

Query: 946  SNEAGVEMFESVG 984
            SNE GV MFE VG
Sbjct: 448  SNEEGVFMFEEVG 460


>ref|XP_002274259.1| PREDICTED: putative pentatricopeptide repeat-containing protein
            At1g26500-like [Vitis vinifera]
          Length = 525

 Score =  362 bits (928), Expect = 1e-97
 Identities = 174/313 (55%), Positives = 239/313 (76%)
 Frame = +1

Query: 46   REISKCVRIFDSILKPHFPPLHSIDTLNLVIESLSNRKLVREAKDLVSKLRPSIPPDGDT 225
            RE+ KCV  F  +    +   +S++TLN V+E L   KL  EAK++V KL+  IPP G T
Sbjct: 154  REMKKCVEFFHLMNAHEYG--YSLETLNKVVEVLCRSKLAVEAKEIVLKLKTWIPPSGVT 211

Query: 226  YGILILGFCKIGDLITASKLWNRAVEEGFEPTIEAYEEIIITLFKINRVDDALRMFATLR 405
            YG LI GFC++GDLI A+ +W+  V+EGF P I+A E+++ TLF INR D+A+++F  +R
Sbjct: 212  YGYLIKGFCEVGDLIEAANVWDLMVDEGFRPGIDAVEKMMETLFNINRFDEAMKLFQAVR 271

Query: 406  ARRFGDARADSYRIVIQWMCKLGRVRYAHMVFDEMLKRGLWLAIDNQTVGALVYGLVARN 585
              RF +    +Y +VI WMCK G+V  A+MVF+EMLKRG+    DN+T+ +L+YGL+A+ 
Sbjct: 272  TTRFDELVLSTYSLVIDWMCKRGKVSQAYMVFEEMLKRGI--QPDNKTMSSLIYGLLAKG 329

Query: 586  RVREAYRVVEMVEVPEIGLYHGLMKGLLRLKRAGEATEVFREMVRRGVEPIMHTYVMLLQ 765
            RVREA ++ E +E P+I +YHG++KGLLRL++AGEAT+VFREM+RRG EP MHTY+MLLQ
Sbjct: 330  RVREANKITEGIERPDIAVYHGVIKGLLRLRKAGEATQVFREMIRRGCEPTMHTYIMLLQ 389

Query: 766  GHLGRRGRKGKDGMVNFESVFVGGLVKQGRMVEVSKFVERVMWGGVEVPRFDYNKFLYWF 945
            GHLG++GRKG   +VNF+S+FVGGL+K G+ ++ SK+VER+M GG+EVPRFDYN+FL+ +
Sbjct: 390  GHLGKKGRKGPHPLVNFDSIFVGGLIKVGKSLDASKYVERMMDGGMEVPRFDYNRFLHCY 449

Query: 946  SNEAGVEMFESVG 984
            SNE GV MFE VG
Sbjct: 450  SNEEGVFMFEEVG 462


>ref|XP_004144262.1| PREDICTED: putative pentatricopeptide repeat-containing protein
            At1g26500-like [Cucumis sativus]
          Length = 505

 Score =  355 bits (910), Expect = 1e-95
 Identities = 177/313 (56%), Positives = 229/313 (73%)
 Frame = +1

Query: 46   REISKCVRIFDSILKPHFPPLHSIDTLNLVIESLSNRKLVREAKDLVSKLRPSIPPDGDT 225
            RE+ KCV  F   L   +   +S+ TLN V+E L   KLV EAK LV KL   I  DG T
Sbjct: 160  RELKKCVEFFH--LMNGYGFCYSLVTLNRVVEKLCGCKLVDEAKFLVMKLNEWIKADGVT 217

Query: 226  YGILILGFCKIGDLITASKLWNRAVEEGFEPTIEAYEEIIITLFKINRVDDALRMFATLR 405
            Y +LI GFC +GDLI ASK+WN  V+EGFEP +EA EE++  LFK N++D+AL++F  LR
Sbjct: 218  YKLLIKGFCNVGDLIEASKMWNLMVDEGFEPEMEAVEEMMNVLFKTNKLDEALKLFQALR 277

Query: 406  ARRFGDARADSYRIVIQWMCKLGRVRYAHMVFDEMLKRGLWLAIDNQTVGALVYGLVARN 585
            + R  D    +Y +VI+W+C  G+V  A +VFDEM KRGL   +DN    +L+YGL+AR 
Sbjct: 278  SDRMNDLIPSTYSLVIRWLCNKGKVGQAFIVFDEMHKRGL--EVDNSVHSSLIYGLLARG 335

Query: 586  RVREAYRVVEMVEVPEIGLYHGLMKGLLRLKRAGEATEVFREMVRRGVEPIMHTYVMLLQ 765
            R REAY ++  +E P++ +YH  +KGLL+LKRA EAT+VFREM+ RG EPIMHTY+MLLQ
Sbjct: 336  RRREAYNIMRRIENPDLDVYHAFIKGLLKLKRANEATQVFREMIERGCEPIMHTYIMLLQ 395

Query: 766  GHLGRRGRKGKDGMVNFESVFVGGLVKQGRMVEVSKFVERVMWGGVEVPRFDYNKFLYWF 945
            GHLG+RGRKG D +VNF+S+FVGGLVK G+ +E +K+VER+M  G+EVPRFDYNKFL+++
Sbjct: 396  GHLGKRGRKGSDPLVNFDSIFVGGLVKNGKSLEATKYVERLMKRGLEVPRFDYNKFLHYY 455

Query: 946  SNEAGVEMFESVG 984
            SNE GV MF  VG
Sbjct: 456  SNEEGVVMFREVG 468


>ref|XP_002322859.1| predicted protein [Populus trichocarpa] gi|222867489|gb|EEF04620.1|
            predicted protein [Populus trichocarpa]
          Length = 502

 Score =  352 bits (904), Expect = 6e-95
 Identities = 175/317 (55%), Positives = 229/317 (72%), Gaps = 4/317 (1%)
 Frame = +1

Query: 46   REISKCVRIFDSILKPHFPPLHS----IDTLNLVIESLSNRKLVREAKDLVSKLRPSIPP 213
            RE+ KC   F      HF   H     ++ LN V+E+L   KLV EAK +V KL+  I P
Sbjct: 155  RELKKCAEFF------HFMNEHGCEYRVERLNKVVENLCKGKLVEEAKFVVLKLKDWIRP 208

Query: 214  DGDTYGILILGFCKIGDLITASKLWNRAVEEGFEPTIEAYEEIIITLFKINRVDDALRMF 393
            DG TYG L+ GFC +G+LI ASK+WN  V+E  EP IE +E+++ TLFK N  D+AL++F
Sbjct: 209  DGVTYGWLVKGFCDVGELIEASKIWNLMVDESIEPEIEVFEKMMETLFKRNEYDEALKVF 268

Query: 394  ATLRARRFGDARADSYRIVIQWMCKLGRVRYAHMVFDEMLKRGLWLAIDNQTVGALVYGL 573
             T+R  R  D    +YR+VI WMC+ G+V  A MVFDEM +RG+    DN T+G+LVYGL
Sbjct: 269  QTMRVNRMDDLALSTYRLVIDWMCRKGKVVQAQMVFDEMRQRGI--QADNSTLGSLVYGL 326

Query: 574  VARNRVREAYRVVEMVEVPEIGLYHGLMKGLLRLKRAGEATEVFREMVRRGVEPIMHTYV 753
            + R R  EA++VVE +E  +I +YHGL+KGL+R +RA EAT+VFREM+ RG EP MHTY+
Sbjct: 327  LTRGRHAEAHKVVERIEKTDISVYHGLIKGLVRSRRASEATQVFREMINRGCEPTMHTYI 386

Query: 754  MLLQGHLGRRGRKGKDGMVNFESVFVGGLVKQGRMVEVSKFVERVMWGGVEVPRFDYNKF 933
            MLLQGHLG+RGRKG D +VNFES+FVGGL+K G+ +E +K+VER M G +EVPRFDYNKF
Sbjct: 387  MLLQGHLGKRGRKGPDPLVNFESIFVGGLIKAGKSLEATKYVERTMKGSLEVPRFDYNKF 446

Query: 934  LYWFSNEAGVEMFESVG 984
            L+++S+E GV MF+ VG
Sbjct: 447  LHYYSSEEGVVMFKEVG 463


>ref|XP_003517831.1| PREDICTED: putative pentatricopeptide repeat-containing protein
            At1g26500-like [Glycine max]
          Length = 494

 Score =  351 bits (900), Expect = 2e-94
 Identities = 171/313 (54%), Positives = 234/313 (74%)
 Frame = +1

Query: 46   REISKCVRIFDSILKPHFPPLHSIDTLNLVIESLSNRKLVREAKDLVSKLRPSIPPDGDT 225
            RE+ KCV  F  +        +++ TLN V+E++   +LV EAK +V KLR  + PDG T
Sbjct: 149  RELKKCVEFFHLMNSNGCE--YNLGTLNKVVEAMCKSRLVDEAKFVVFKLRECVRPDGVT 206

Query: 226  YGILILGFCKIGDLITASKLWNRAVEEGFEPTIEAYEEIIITLFKINRVDDALRMFATLR 405
            Y  LI+G+C  GDL+ ASK+WN   +EGFE  ++A E+++ T FK+N   +ALR+F T+R
Sbjct: 207  YKNLIIGYCDKGDLVGASKVWNLMEDEGFEADVDAVEKMMETFFKVNEYGEALRLFETMR 266

Query: 406  ARRFGDARADSYRIVIQWMCKLGRVRYAHMVFDEMLKRGLWLAIDNQTVGALVYGLVARN 585
             +R  +  A +Y +VI+W+CK G +  AH VF+EM +RG+   +++ T+G +VYGL+ R 
Sbjct: 267  FKRMNELGASTYGLVIRWLCKKGMMARAHEVFEEMRERGV--RVNDSTLGDVVYGLLTRR 324

Query: 586  RVREAYRVVEMVEVPEIGLYHGLMKGLLRLKRAGEATEVFREMVRRGVEPIMHTYVMLLQ 765
            RVREAYRV E +EVP++ +YHG +KGLL+L+RAGEAT+VFREM+RRG EP MHTY+MLLQ
Sbjct: 325  RVREAYRVFEGIEVPDLCVYHGFIKGLLKLRRAGEATQVFREMIRRGCEPTMHTYIMLLQ 384

Query: 766  GHLGRRGRKGKDGMVNFESVFVGGLVKQGRMVEVSKFVERVMWGGVEVPRFDYNKFLYWF 945
            GHLGRRGRKG D +VNF+++FVGG+VK G+  E +K+VERV+  G+EVPRFDYNKFL++F
Sbjct: 385  GHLGRRGRKGTDPLVNFDTIFVGGMVKAGKSKEATKYVERVLNRGMEVPRFDYNKFLHYF 444

Query: 946  SNEAGVEMFESVG 984
            SNE GV MFE VG
Sbjct: 445  SNEEGVHMFEDVG 457


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