BLASTX nr result
ID: Dioscorea21_contig00000561
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Dioscorea21_contig00000561
(1995 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002464020.1| hypothetical protein SORBIDRAFT_01g010680 [S... 803 0.0
ref|NP_001149034.1| protein binding protein [Zea mays] gi|195624... 802 0.0
ref|NP_001051029.1| Os03g0706900 [Oryza sativa Japonica Group] g... 800 0.0
gb|AFW67871.1| putative RING zinc finger domain superfamily prot... 797 0.0
tpg|DAA50911.1| TPA: putative RING zinc finger domain superfamil... 795 0.0
>ref|XP_002464020.1| hypothetical protein SORBIDRAFT_01g010680 [Sorghum bicolor]
gi|241917874|gb|EER91018.1| hypothetical protein
SORBIDRAFT_01g010680 [Sorghum bicolor]
Length = 473
Score = 803 bits (2075), Expect = 0.0
Identities = 369/473 (78%), Positives = 423/473 (89%)
Frame = -2
Query: 1868 LNRRRAMTWSRVGKSAQGVAAHGLLFCFTILLALKLDDRVSYSWWIIFVPLWLFHTVVAR 1689
+ RRRA TW+ VGK+AQ AAH LFCFT+LLAL +D R +YSWWIIF+PLWLFH +VAR
Sbjct: 1 MQRRRAHTWAGVGKTAQAAAAHAALFCFTLLLALMVDGRTTYSWWIIFIPLWLFHGIVAR 60
Query: 1688 GRFSLPAPSIPHDRHWAPCHSIVATPLLVSFELLLCIYLESIGAHTNPAISLKIVFLPLL 1509
GRFS+PAPS+PH RHWAPCHSIVA PLL++FELLLCIYLESI +P++ LKIVFLPLL
Sbjct: 61 GRFSMPAPSLPHGRHWAPCHSIVAAPLLIAFELLLCIYLESIRVRNHPSVDLKIVFLPLL 120
Query: 1508 AFEIIILIDNFRMCRALMPGDEESMSDEAIWETLPHFWVAISMVFLVAATSFTLLKLCGD 1329
AFE IILIDNFRMCRALMPGDEESMSDEAIWETLPHFWVAISMVFL+AAT+FTLLKL GD
Sbjct: 121 AFEAIILIDNFRMCRALMPGDEESMSDEAIWETLPHFWVAISMVFLIAATTFTLLKLSGD 180
Query: 1328 VGALGWWDLFINFGIAECFAFLVCTKWSNPMIHRPSQDVEPXXXXXSIRYREWNSGLLFS 1149
VGALGWWDLFIN+GIAECFAFLVCT+W NPMIH+ E +IRYR+W SGL+
Sbjct: 181 VGALGWWDLFINYGIAECFAFLVCTRWFNPMIHKSPTHGEASSSSAAIRYRDWESGLVLP 240
Query: 1148 SMEDHDQDRLCSIQDIGGHIMKIPLLAFQILLCMRLEGTPSGARHIPILALFSPLFLLQG 969
S+EDH+Q+RLC + DIGGH+MKIPL+AFQ+LLCMRLEGTP+ AR+IPI ALFSPLF+LQG
Sbjct: 241 SLEDHEQERLCGLPDIGGHVMKIPLVAFQVLLCMRLEGTPASARYIPIFALFSPLFILQG 300
Query: 968 AGVIFTISRLVEKLVLLSRSGSFTGRYLTISSRTRDCFSFLHHGSRLLGWWSIDEGSKEE 789
AGV+F+++RLVEK+VLL R+G + YLT SS+ RDCF+FLH GSRLLGWWSIDEGSKEE
Sbjct: 301 AGVLFSLARLVEKVVLLLRNGPVSPNYLTASSKVRDCFAFLHRGSRLLGWWSIDEGSKEE 360
Query: 788 QARLYYDDATGYNTFCGYPPEVVKKMPKKDLAEEVWRLQAALGEQTEITKYSQQEYERLQ 609
QARL+Y ++TGYNTFCGYPPEVV+KMPKKDLAEEVWRLQAALGEQ+EITK ++QEYERLQ
Sbjct: 361 QARLFYTESTGYNTFCGYPPEVVRKMPKKDLAEEVWRLQAALGEQSEITKCTKQEYERLQ 420
Query: 608 NEKILCRVCFEGEICMVLLPCRHRTLCKNCSEKCKKCPICRVSIEERMPVYDV 450
NEK+LCR+C+EGEICMVLLPCRHRTLCK+C+EKCKKCPICRV IEERMPVYDV
Sbjct: 421 NEKVLCRICYEGEICMVLLPCRHRTLCKSCAEKCKKCPICRVPIEERMPVYDV 473
>ref|NP_001149034.1| protein binding protein [Zea mays] gi|195624150|gb|ACG33905.1|
protein binding protein [Zea mays]
gi|414872353|tpg|DAA50910.1| TPA: putative RING zinc
finger domain superfamily protein [Zea mays]
Length = 473
Score = 802 bits (2071), Expect = 0.0
Identities = 367/473 (77%), Positives = 422/473 (89%)
Frame = -2
Query: 1868 LNRRRAMTWSRVGKSAQGVAAHGLLFCFTILLALKLDDRVSYSWWIIFVPLWLFHTVVAR 1689
+ RRR TW+ VGK+AQ +AH LFCFT+LLAL++D R +YSWWIIF+PLWLFH +VAR
Sbjct: 1 MQRRRGHTWAGVGKTAQAASAHAALFCFTLLLALRVDGRTTYSWWIIFIPLWLFHGIVAR 60
Query: 1688 GRFSLPAPSIPHDRHWAPCHSIVATPLLVSFELLLCIYLESIGAHTNPAISLKIVFLPLL 1509
GRFS+PAPS+PH RHWAPCHSIVA PLL++FELLLCIYLESI +P+ LKIVFLPLL
Sbjct: 61 GRFSMPAPSLPHGRHWAPCHSIVAAPLLIAFELLLCIYLESIRVRNHPSFDLKIVFLPLL 120
Query: 1508 AFEIIILIDNFRMCRALMPGDEESMSDEAIWETLPHFWVAISMVFLVAATSFTLLKLCGD 1329
AFE IILIDNFRMCRALMPGDEESMSDEAIWETLPHFWVAISMVFL+AAT+FTLLKL GD
Sbjct: 121 AFEAIILIDNFRMCRALMPGDEESMSDEAIWETLPHFWVAISMVFLIAATTFTLLKLSGD 180
Query: 1328 VGALGWWDLFINFGIAECFAFLVCTKWSNPMIHRPSQDVEPXXXXXSIRYREWNSGLLFS 1149
VGALGWWDLFIN+GIAECFAFLVCT+W NPMIH+ E +IRYR+W SGL+
Sbjct: 181 VGALGWWDLFINYGIAECFAFLVCTRWFNPMIHKSPTHGEASSSSAAIRYRDWESGLVLP 240
Query: 1148 SMEDHDQDRLCSIQDIGGHIMKIPLLAFQILLCMRLEGTPSGARHIPILALFSPLFLLQG 969
S+EDH+Q++LC + DIGGH+MKIPL+AFQ+LLCMRLEGTP AR+IPI ALFSPLF+LQG
Sbjct: 241 SLEDHEQEKLCGLPDIGGHVMKIPLVAFQVLLCMRLEGTPPSARYIPIFALFSPLFILQG 300
Query: 968 AGVIFTISRLVEKLVLLSRSGSFTGRYLTISSRTRDCFSFLHHGSRLLGWWSIDEGSKEE 789
AGV+F+++RLVEK+VLL R+G + YLT SS+ RDCF+FLHHGSRLLGWWSIDEGSKEE
Sbjct: 301 AGVLFSLARLVEKVVLLLRNGPVSPNYLTASSKVRDCFAFLHHGSRLLGWWSIDEGSKEE 360
Query: 788 QARLYYDDATGYNTFCGYPPEVVKKMPKKDLAEEVWRLQAALGEQTEITKYSQQEYERLQ 609
QARL+Y ++TGYNTFCGYPPEVV+KMPKKDLAEEVWRLQAALGEQ+EITK ++QEYERLQ
Sbjct: 361 QARLFYTESTGYNTFCGYPPEVVRKMPKKDLAEEVWRLQAALGEQSEITKCTKQEYERLQ 420
Query: 608 NEKILCRVCFEGEICMVLLPCRHRTLCKNCSEKCKKCPICRVSIEERMPVYDV 450
NEK+LCR+C+EGEICMVLLPCRHRTLCK+C+EKCKKCPICRV IEERMPVYDV
Sbjct: 421 NEKVLCRICYEGEICMVLLPCRHRTLCKSCAEKCKKCPICRVPIEERMPVYDV 473
>ref|NP_001051029.1| Os03g0706900 [Oryza sativa Japonica Group]
gi|13937305|gb|AAK50136.1|AC087797_21 unknown protein
[Oryza sativa Japonica Group] gi|108710669|gb|ABF98464.1|
zinc finger family protein, putative, expressed [Oryza
sativa Japonica Group] gi|113549500|dbj|BAF12943.1|
Os03g0706900 [Oryza sativa Japonica Group]
gi|215694438|dbj|BAG89455.1| unnamed protein product
[Oryza sativa Japonica Group] gi|222625644|gb|EEE59776.1|
hypothetical protein OsJ_12282 [Oryza sativa Japonica
Group]
Length = 473
Score = 800 bits (2065), Expect = 0.0
Identities = 365/473 (77%), Positives = 421/473 (89%)
Frame = -2
Query: 1868 LNRRRAMTWSRVGKSAQGVAAHGLLFCFTILLALKLDDRVSYSWWIIFVPLWLFHTVVAR 1689
+ RRRA TW+ VGK+AQ AAH LFCFT+LLALK+D R +YSWWIIF+PLWLFH +VAR
Sbjct: 1 MQRRRAQTWAGVGKTAQAAAAHAALFCFTLLLALKVDGRTAYSWWIIFIPLWLFHGIVAR 60
Query: 1688 GRFSLPAPSIPHDRHWAPCHSIVATPLLVSFELLLCIYLESIGAHTNPAISLKIVFLPLL 1509
GRFS+PAPS+PH RHWAPCHSIVA PLL++FELLLCIYLES+ + P + LKIVFLPLL
Sbjct: 61 GRFSMPAPSLPHGRHWAPCHSIVAAPLLIAFELLLCIYLESLRVKSKPTVDLKIVFLPLL 120
Query: 1508 AFEIIILIDNFRMCRALMPGDEESMSDEAIWETLPHFWVAISMVFLVAATSFTLLKLCGD 1329
AFE+IIL DNFRMCRALMPGDEESMSDEAIWETLPHFWVAISMVFL+AAT+FTLLKL GD
Sbjct: 121 AFEVIILADNFRMCRALMPGDEESMSDEAIWETLPHFWVAISMVFLIAATTFTLLKLSGD 180
Query: 1328 VGALGWWDLFINFGIAECFAFLVCTKWSNPMIHRPSQDVEPXXXXXSIRYREWNSGLLFS 1149
VGALGWWDLFIN+GIAECFAFLVCT+W NPMIH+ E +IRYR+W SGLL
Sbjct: 181 VGALGWWDLFINYGIAECFAFLVCTRWFNPMIHKSPNPGEASSSSAAIRYRDWESGLLLP 240
Query: 1148 SMEDHDQDRLCSIQDIGGHIMKIPLLAFQILLCMRLEGTPSGARHIPILALFSPLFLLQG 969
S+EDH+Q+RLC + DIGGH+MKIPL+ FQ+LLCMRLEGTP A++IPI ALFSPLF+LQG
Sbjct: 241 SLEDHEQERLCGLPDIGGHVMKIPLVIFQVLLCMRLEGTPPSAQYIPIFALFSPLFILQG 300
Query: 968 AGVIFTISRLVEKLVLLSRSGSFTGRYLTISSRTRDCFSFLHHGSRLLGWWSIDEGSKEE 789
AGV+F+++RL+EK+VLL R+G + YLTISS+ RDCF+FLH GSRLLGWWSIDEGSKEE
Sbjct: 301 AGVLFSLARLLEKVVLLLRNGPVSPNYLTISSKVRDCFAFLHRGSRLLGWWSIDEGSKEE 360
Query: 788 QARLYYDDATGYNTFCGYPPEVVKKMPKKDLAEEVWRLQAALGEQTEITKYSQQEYERLQ 609
QARL+Y ++TGYNTFCGYPPEVV+KMPK+DLAEEVWRLQAALGEQ+EITK ++QE+ERLQ
Sbjct: 361 QARLFYTESTGYNTFCGYPPEVVRKMPKRDLAEEVWRLQAALGEQSEITKCTKQEFERLQ 420
Query: 608 NEKILCRVCFEGEICMVLLPCRHRTLCKNCSEKCKKCPICRVSIEERMPVYDV 450
NEK+LCR+C+EGEICMVLLPCRHRTLCK CS+KCKKCPICRV IEERMPVYDV
Sbjct: 421 NEKVLCRICYEGEICMVLLPCRHRTLCKTCSDKCKKCPICRVPIEERMPVYDV 473
>gb|AFW67871.1| putative RING zinc finger domain superfamily protein [Zea mays]
Length = 472
Score = 797 bits (2059), Expect = 0.0
Identities = 368/473 (77%), Positives = 420/473 (88%)
Frame = -2
Query: 1868 LNRRRAMTWSRVGKSAQGVAAHGLLFCFTILLALKLDDRVSYSWWIIFVPLWLFHTVVAR 1689
+ RRR TW+ VGK+AQ AAH LFCFT+LLAL++D R +YSWWIIF PLWLFH +VAR
Sbjct: 1 MQRRRGHTWAGVGKTAQAAAAHAALFCFTLLLALRVDGRTAYSWWIIFSPLWLFHGIVAR 60
Query: 1688 GRFSLPAPSIPHDRHWAPCHSIVATPLLVSFELLLCIYLESIGAHTNPAISLKIVFLPLL 1509
GRFS+PAPS+PH RHWAPCHSIVA PLL++FELLLCIYLESI +P++ LKIVFLPLL
Sbjct: 61 GRFSMPAPSLPHGRHWAPCHSIVAAPLLIAFELLLCIYLESIRVRNHPSVDLKIVFLPLL 120
Query: 1508 AFEIIILIDNFRMCRALMPGDEESMSDEAIWETLPHFWVAISMVFLVAATSFTLLKLCGD 1329
AFE IILIDNFRMCRALMPGDEESMSDEAIWETLPHFWV+ISMVFL+AAT+FTLLKL GD
Sbjct: 121 AFEAIILIDNFRMCRALMPGDEESMSDEAIWETLPHFWVSISMVFLIAATTFTLLKLSGD 180
Query: 1328 VGALGWWDLFINFGIAECFAFLVCTKWSNPMIHRPSQDVEPXXXXXSIRYREWNSGLLFS 1149
VGALGWWDLFIN+GIAECFAFLVCT+W NPMIH+ E IRYR+W SGL+
Sbjct: 181 VGALGWWDLFINYGIAECFAFLVCTRWFNPMIHKSPTHGEASSSSA-IRYRDWESGLVLP 239
Query: 1148 SMEDHDQDRLCSIQDIGGHIMKIPLLAFQILLCMRLEGTPSGARHIPILALFSPLFLLQG 969
S+EDH+Q+RLC + DIGGH+MKIPL+AFQ+LLCMRLEGTP AR+IPI ALFSPLF+LQG
Sbjct: 240 SLEDHEQERLCGLPDIGGHVMKIPLVAFQVLLCMRLEGTPPSARNIPIFALFSPLFILQG 299
Query: 968 AGVIFTISRLVEKLVLLSRSGSFTGRYLTISSRTRDCFSFLHHGSRLLGWWSIDEGSKEE 789
AG F+++RLVEK+VLL R+G + YLT+SS+ RDCF+FLHHGSRLLGWWSIDEGSKEE
Sbjct: 300 AGAFFSLARLVEKVVLLLRNGPVSPNYLTVSSKVRDCFAFLHHGSRLLGWWSIDEGSKEE 359
Query: 788 QARLYYDDATGYNTFCGYPPEVVKKMPKKDLAEEVWRLQAALGEQTEITKYSQQEYERLQ 609
QARL+Y ++TGYNTFCGYPPEVV+KMPKKDLAEEVWRLQAALGEQ+EITK ++QEYERLQ
Sbjct: 360 QARLFYTESTGYNTFCGYPPEVVRKMPKKDLAEEVWRLQAALGEQSEITKCTKQEYERLQ 419
Query: 608 NEKILCRVCFEGEICMVLLPCRHRTLCKNCSEKCKKCPICRVSIEERMPVYDV 450
NEK+LCRVC+EGEICMVLLPCRHRTLCK+C+EKCKKCPICRV IEERMPVYDV
Sbjct: 420 NEKVLCRVCYEGEICMVLLPCRHRTLCKSCAEKCKKCPICRVPIEERMPVYDV 472
>tpg|DAA50911.1| TPA: putative RING zinc finger domain superfamily protein [Zea mays]
Length = 481
Score = 795 bits (2052), Expect = 0.0
Identities = 367/481 (76%), Positives = 422/481 (87%), Gaps = 8/481 (1%)
Frame = -2
Query: 1868 LNRRRAMTWSRVGKSAQGVAAHGLLFCFTILLALKLDDRVSYSWWIIFVPLWLFHTVVAR 1689
+ RRR TW+ VGK+AQ +AH LFCFT+LLAL++D R +YSWWIIF+PLWLFH +VAR
Sbjct: 1 MQRRRGHTWAGVGKTAQAASAHAALFCFTLLLALRVDGRTTYSWWIIFIPLWLFHGIVAR 60
Query: 1688 GRFSLPAPSIPHDRHWAPCHSIVATPLLVSFELLLCIYLESIGAHTNPAISLKIVFLPLL 1509
GRFS+PAPS+PH RHWAPCHSIVA PLL++FELLLCIYLESI +P+ LKIVFLPLL
Sbjct: 61 GRFSMPAPSLPHGRHWAPCHSIVAAPLLIAFELLLCIYLESIRVRNHPSFDLKIVFLPLL 120
Query: 1508 AFEIIILIDNFRMCRALMPGDEESMSDEAIWETLPHFWVAISMVFLVAATSFTLLKLCGD 1329
AFE IILIDNFRMCRALMPGDEESMSDEAIWETLPHFWVAISMVFL+AAT+FTLLKL GD
Sbjct: 121 AFEAIILIDNFRMCRALMPGDEESMSDEAIWETLPHFWVAISMVFLIAATTFTLLKLSGD 180
Query: 1328 VGALGWWDLFINFGIAECFAFLVCTKWSNPMIHRPSQDVEPXXXXXSIRYREWNSGLLFS 1149
VGALGWWDLFIN+GIAECFAFLVCT+W NPMIH+ E +IRYR+W SGL+
Sbjct: 181 VGALGWWDLFINYGIAECFAFLVCTRWFNPMIHKSPTHGEASSSSAAIRYRDWESGLVLP 240
Query: 1148 SMEDHDQDRLCSIQDIGGHIMKIPLLAFQILLCMRLEGTPSGARHIPILALFSPLFLLQG 969
S+EDH+Q++LC + DIGGH+MKIPL+AFQ+LLCMRLEGTP AR+IPI ALFSPLF+LQG
Sbjct: 241 SLEDHEQEKLCGLPDIGGHVMKIPLVAFQVLLCMRLEGTPPSARYIPIFALFSPLFILQG 300
Query: 968 AGVIFTISRLVEKLVLLSRSGSFTGRYLTISSRTRDCFSFLHHGS--------RLLGWWS 813
AGV+F+++RLVEK+VLL R+G + YLT SS+ RDCF+FLHHGS RLLGWWS
Sbjct: 301 AGVLFSLARLVEKVVLLLRNGPVSPNYLTASSKVRDCFAFLHHGSSFFVHVLCRLLGWWS 360
Query: 812 IDEGSKEEQARLYYDDATGYNTFCGYPPEVVKKMPKKDLAEEVWRLQAALGEQTEITKYS 633
IDEGSKEEQARL+Y ++TGYNTFCGYPPEVV+KMPKKDLAEEVWRLQAALGEQ+EITK +
Sbjct: 361 IDEGSKEEQARLFYTESTGYNTFCGYPPEVVRKMPKKDLAEEVWRLQAALGEQSEITKCT 420
Query: 632 QQEYERLQNEKILCRVCFEGEICMVLLPCRHRTLCKNCSEKCKKCPICRVSIEERMPVYD 453
+QEYERLQNEK+LCR+C+EGEICMVLLPCRHRTLCK+C+EKCKKCPICRV IEERMPVYD
Sbjct: 421 KQEYERLQNEKVLCRICYEGEICMVLLPCRHRTLCKSCAEKCKKCPICRVPIEERMPVYD 480
Query: 452 V 450
V
Sbjct: 481 V 481