BLASTX nr result

ID: Dioscorea21_contig00000528 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00000528
         (1061 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002449273.1| hypothetical protein SORBIDRAFT_05g007010 [S...   357   4e-96
gb|ABK26041.1| unknown [Picea sitchensis]                             354   2e-95
gb|ACF81121.1| unknown [Zea mays] gi|195621918|gb|ACG32789.1| PH...   352   1e-94
ref|NP_001067599.1| Os11g0244800 [Oryza sativa Japonica Group] g...   348   2e-93
ref|NP_001055570.1| Os05g0419100 [Oryza sativa Japonica Group] g...   345   8e-93

>ref|XP_002449273.1| hypothetical protein SORBIDRAFT_05g007010 [Sorghum bicolor]
            gi|241935116|gb|EES08261.1| hypothetical protein
            SORBIDRAFT_05g007010 [Sorghum bicolor]
          Length = 254

 Score =  357 bits (915), Expect = 4e-96
 Identities = 175/249 (70%), Positives = 194/249 (77%), Gaps = 3/249 (1%)
 Frame = -1

Query: 1052 RTAEEVFRDFRGRRAGMIKALTTDVEKFYKQCDPEKENLCLYGLPDETWXXXXXXXXXXX 873
            RT E+VFRDFR RRAGMIKALTTDVEKFY+QCDPEKENLCLYGLP+ETW           
Sbjct: 8    RTPEDVFRDFRARRAGMIKALTTDVEKFYQQCDPEKENLCLYGLPNETWEVNLPAEEVPP 67

Query: 872  XXXXXXLGINFARDGMEEKDWLALVAVHSDAWLLAVAFYFGARFGFDKDARRRLFQMINN 693
                  LGINFARDGM+EKDWL+LVAVHSDAWLLAVAFYFGARFGFDK++R+RLF MINN
Sbjct: 68   ELPEPALGINFARDGMDEKDWLSLVAVHSDAWLLAVAFYFGARFGFDKESRKRLFVMINN 127

Query: 692  LPTIFEVVTGSVKKQSKEKTP--SSKSNKPISKTPQHPDSQTKSSKAPPPKXXXXXXXXX 519
            LPTI+EVVTG+ KKQ+KEKTP  SSKSNK  SK P+ P+  ++ SK PPPK         
Sbjct: 128  LPTIYEVVTGTAKKQTKEKTPKSSSKSNKSGSKPPRQPEPNSRGSKMPPPK--DEDDSGG 185

Query: 518  XXXXXXXEHGNTLCGACGDNYANDEFWICCDMCEKWFHGKCVKITPARAEHIKQYKCPAC 339
                   +H NTLCGACGDNY  DEFWICCD CE WFHGKCVKITPA+AEHIK YKCP C
Sbjct: 186  EEEEEEEDHENTLCGACGDNYGQDEFWICCDACETWFHGKCVKITPAKAEHIKHYKCPNC 245

Query: 338  S-NNKRARV 315
            S ++KRARV
Sbjct: 246  SGSSKRARV 254


>gb|ABK26041.1| unknown [Picea sitchensis]
          Length = 262

 Score =  354 bits (908), Expect = 2e-95
 Identities = 175/252 (69%), Positives = 195/252 (77%), Gaps = 3/252 (1%)
 Frame = -1

Query: 1061 YNPRTAEEVFRDFRGRRAGMIKALTTDVEKFYKQCDPEKENLCLYGLPDETWXXXXXXXX 882
            YNPRT EEVF+DF+GRRAGMIKALT DVE+FY+QCDPEKENLCLYGLP+E+W        
Sbjct: 16   YNPRTVEEVFKDFKGRRAGMIKALTNDVEEFYQQCDPEKENLCLYGLPNESWEVNLPAEE 75

Query: 881  XXXXXXXXXLGINFARDGMEEKDWLALVAVHSDAWLLAVAFYFGARFGFDKDARRRLFQM 702
                     LGINFARDGM+EKDWL+LVAVHSDAWLLAV+FYFGARFGFD++ R+RLF M
Sbjct: 76   VPPELPEPALGINFARDGMQEKDWLSLVAVHSDAWLLAVSFYFGARFGFDRNERKRLFIM 135

Query: 701  INNLPTIFEVVTGSVKKQSKEK---TPSSKSNKPISKTPQHPDSQTKSSKAPPPKXXXXX 531
            IN LPTIFEVVTG+ KKQSKEK   T +S S       P+  +SQTKSSK PPPK     
Sbjct: 136  INELPTIFEVVTGAAKKQSKEKSTVTNNSSSKNKSGIKPRVSESQTKSSKLPPPK----D 191

Query: 530  XXXXXXXXXXXEHGNTLCGACGDNYANDEFWICCDMCEKWFHGKCVKITPARAEHIKQYK 351
                       EHG+TLCGACG+NYA+DEFWICCDMCEKWFHGKCVKITPARAEHIK YK
Sbjct: 192  EDDTLDEEEDDEHGDTLCGACGENYASDEFWICCDMCEKWFHGKCVKITPARAEHIKHYK 251

Query: 350  CPACSNNKRARV 315
            CP+CS NKR RV
Sbjct: 252  CPSCS-NKRPRV 262


>gb|ACF81121.1| unknown [Zea mays] gi|195621918|gb|ACG32789.1| PHD finger protein
            [Zea mays] gi|413920622|gb|AFW60554.1| PHD finger protein
            [Zea mays]
          Length = 254

 Score =  352 bits (902), Expect = 1e-94
 Identities = 172/248 (69%), Positives = 191/248 (77%), Gaps = 3/248 (1%)
 Frame = -1

Query: 1052 RTAEEVFRDFRGRRAGMIKALTTDVEKFYKQCDPEKENLCLYGLPDETWXXXXXXXXXXX 873
            RT E+VFRDFR RRAGMIKALTTDVEKFY+QCDPEKENLCLYGLP+ETW           
Sbjct: 8    RTPEDVFRDFRARRAGMIKALTTDVEKFYQQCDPEKENLCLYGLPNETWEVNLPAEEVPP 67

Query: 872  XXXXXXLGINFARDGMEEKDWLALVAVHSDAWLLAVAFYFGARFGFDKDARRRLFQMINN 693
                  LGINFARDGM+EKDWL+LVAVHSDAWLLAVAFYFGARFGFDK++R+RLF MINN
Sbjct: 68   ELPEPALGINFARDGMDEKDWLSLVAVHSDAWLLAVAFYFGARFGFDKESRKRLFVMINN 127

Query: 692  LPTIFEVVTGSVKKQSKEKTP--SSKSNKPISKTPQHPDSQTKSSKAPPPKXXXXXXXXX 519
            LPTI+EVVTG+ KKQ+KEKTP  SSKSNK   K P+ P+  ++ SK PPPK         
Sbjct: 128  LPTIYEVVTGTAKKQTKEKTPKSSSKSNKAGPKPPRQPEPNSRGSKMPPPK--DEDDSGG 185

Query: 518  XXXXXXXEHGNTLCGACGDNYANDEFWICCDMCEKWFHGKCVKITPARAEHIKQYKCPAC 339
                   +H NTLCG+CGDNY  DEFWICCD CE WFHGKCVKITPA+AEHIK YKCP C
Sbjct: 186  EEEEEEEDHENTLCGSCGDNYGQDEFWICCDACETWFHGKCVKITPAKAEHIKHYKCPNC 245

Query: 338  S-NNKRAR 318
            S + KRAR
Sbjct: 246  SGSGKRAR 253


>ref|NP_001067599.1| Os11g0244800 [Oryza sativa Japonica Group]
            gi|122248817|sp|Q2R837.1|ALFL8_ORYSJ RecName: Full=PHD
            finger protein ALFIN-LIKE 8
            gi|347662397|sp|B8BJV8.1|ALFL8_ORYSI RecName: Full=PHD
            finger protein ALFIN-LIKE 8 gi|108864188|gb|ABA92392.2|
            PHD finger protein, putative, expressed [Oryza sativa
            Japonica Group] gi|113644821|dbj|BAF27962.1| Os11g0244800
            [Oryza sativa Japonica Group]
            gi|215737030|dbj|BAG95959.1| unnamed protein product
            [Oryza sativa Japonica Group] gi|218185517|gb|EEC67944.1|
            hypothetical protein OsI_35671 [Oryza sativa Indica
            Group] gi|222615776|gb|EEE51908.1| hypothetical protein
            OsJ_33509 [Oryza sativa Japonica Group]
          Length = 254

 Score =  348 bits (892), Expect = 2e-93
 Identities = 170/248 (68%), Positives = 189/248 (76%), Gaps = 3/248 (1%)
 Frame = -1

Query: 1052 RTAEEVFRDFRGRRAGMIKALTTDVEKFYKQCDPEKENLCLYGLPDETWXXXXXXXXXXX 873
            RT E+VFRDFR RRAGMIKALTTDVEKFY+QCDPEKENLCLYGLP+ETW           
Sbjct: 8    RTPEDVFRDFRARRAGMIKALTTDVEKFYQQCDPEKENLCLYGLPNETWEVNLPAEEVPP 67

Query: 872  XXXXXXLGINFARDGMEEKDWLALVAVHSDAWLLAVAFYFGARFGFDKDARRRLFQMINN 693
                  LGINFARDGM+EKDWL+LVAVHSD WLLAVAFYFGARFGFDK++R+RLF MINN
Sbjct: 68   ELPEPALGINFARDGMDEKDWLSLVAVHSDTWLLAVAFYFGARFGFDKESRKRLFSMINN 127

Query: 692  LPTIFEVVTGSVKKQSKEKTP--SSKSNKPISKTPQHPDSQTKSSKAPPPKXXXXXXXXX 519
            LPTI+EVVTG+ KKQSKEKTP  S KSNK  +K  + P+  ++  K PPPK         
Sbjct: 128  LPTIYEVVTGTAKKQSKEKTPKTSGKSNKSGTKPSRQPEPNSRGPKMPPPK--DEDDSGG 185

Query: 518  XXXXXXXEHGNTLCGACGDNYANDEFWICCDMCEKWFHGKCVKITPARAEHIKQYKCPAC 339
                   +H NTLCGACGDNY  DEFWICCD CE WFHGKCVKITPA+AEHIK YKCP C
Sbjct: 186  EEEEEEEDHENTLCGACGDNYGQDEFWICCDACETWFHGKCVKITPAKAEHIKHYKCPNC 245

Query: 338  -SNNKRAR 318
             S++KRAR
Sbjct: 246  SSSSKRAR 253


>ref|NP_001055570.1| Os05g0419100 [Oryza sativa Japonica Group]
            gi|75253057|sp|Q60DW3.1|ALFL5_ORYSJ RecName: Full=PHD
            finger protein ALFIN-LIKE 5
            gi|347662394|sp|A2Y4R8.1|ALFL5_ORYSI RecName: Full=PHD
            finger protein ALFIN-LIKE 5 gi|53982665|gb|AAV25644.1|
            putative nucleic acid binding protein [Oryza sativa
            Japonica Group] gi|113579121|dbj|BAF17484.1| Os05g0419100
            [Oryza sativa Japonica Group] gi|125552369|gb|EAY98078.1|
            hypothetical protein OsI_19996 [Oryza sativa Indica
            Group] gi|215768239|dbj|BAH00468.1| unnamed protein
            product [Oryza sativa Japonica Group]
            gi|222631624|gb|EEE63756.1| hypothetical protein
            OsJ_18575 [Oryza sativa Japonica Group]
          Length = 258

 Score =  345 bits (886), Expect = 8e-93
 Identities = 171/250 (68%), Positives = 184/250 (73%), Gaps = 2/250 (0%)
 Frame = -1

Query: 1061 YNPRTAEEVFRDFRGRRAGMIKALTTDVEKFYKQCDPEKENLCLYGLPDETWXXXXXXXX 882
            Y  RTAEEVFRDFRGRRAGMIKALTTDVEKFY+ CDPEKENLCLYG P+ETW        
Sbjct: 9    YTSRTAEEVFRDFRGRRAGMIKALTTDVEKFYQLCDPEKENLCLYGYPNETWEVTLPAEE 68

Query: 881  XXXXXXXXXLGINFARDGMEEKDWLALVAVHSDAWLLAVAFYFGARFGFDKDARRRLFQM 702
                     LGINFARDGM EKDWLALVAVHSD+WLLAVAFYF ARFGFDK+ARRRLF M
Sbjct: 69   VPPEIPEPALGINFARDGMNEKDWLALVAVHSDSWLLAVAFYFAARFGFDKEARRRLFNM 128

Query: 701  INNLPTIFEVVTGSVKKQSKEKTPSS--KSNKPISKTPQHPDSQTKSSKAPPPKXXXXXX 528
            INNLPTIFEVVTG+ KKQ+KEK P+S  K NKP SK    P+S +K+ K P P       
Sbjct: 129  INNLPTIFEVVTGAAKKQTKEKAPNSTNKPNKPSSKMQPRPESHSKAPKPPAPPKDDDES 188

Query: 527  XXXXXXXXXXEHGNTLCGACGDNYANDEFWICCDMCEKWFHGKCVKITPARAEHIKQYKC 348
                      E  NTLCG+CG N   DEFWICCD CE+W+HGKCVKITPARAEHIK YKC
Sbjct: 189  GDEYADEEEEERDNTLCGSCGTNDGKDEFWICCDSCERWYHGKCVKITPARAEHIKHYKC 248

Query: 347  PACSNNKRAR 318
            P C  NKRAR
Sbjct: 249  PDC-GNKRAR 257


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