BLASTX nr result

ID: Dioscorea21_contig00000506 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00000506
         (641 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003536856.1| PREDICTED: uncharacterized protein LOC100775...   212   4e-53
ref|XP_002301538.1| predicted protein [Populus trichocarpa] gi|2...   199   5e-49
gb|ABK92443.1| unknown [Populus trichocarpa]                          198   6e-49
ref|XP_003562532.1| PREDICTED: uncharacterized protein LOC100829...   192   3e-47
ref|NP_001144387.1| uncharacterized protein LOC100277315 [Zea ma...   192   4e-47

>ref|XP_003536856.1| PREDICTED: uncharacterized protein LOC100775788 [Glycine max]
          Length = 407

 Score =  212 bits (540), Expect = 4e-53
 Identities = 102/214 (47%), Positives = 138/214 (64%), Gaps = 1/214 (0%)
 Frame = -2

Query: 640 WQVPXXXXXXXXXXXXXXXXLSRWKRVALRSSALWLPCWRSIHPLWILVFRAFVALCMSW 461
           WQVP                + + K      + LWLPCWR + P+W+   RAF  LC++ 
Sbjct: 104 WQVPVCALILIVSIITASMQIVKAKAQPFYHNHLWLPCWRKLSPVWLFFSRAFAFLCLAH 163

Query: 460 ILFRTVLHDGLNAFYFYTQWTFTLVIIYFVIGACISAHGCWIYSKYHHPDNEETNGFLNG 281
           + F  +  DG  +FYFYTQWTFTLV+IYF +G  ISAHGCW Y       N E   FL  
Sbjct: 164 LHFDIIALDGAFSFYFYTQWTFTLVMIYFALGTIISAHGCWQYINKPPLQNGEMAEFLRR 223

Query: 280 NVEEHSSVTLTYRTKQNRNMTKLQKYLEQEDKDQRAGFWGYAMQVIYQTSAGAVVLTDVV 101
           ++EE S+ ++ YR K+ ++  +LQ    QE+ +QR GFWGY MQ+ YQTSAGA++LTD+V
Sbjct: 224 DLEE-STNSIAYREKETKSSIRLQSQYIQEEFNQRVGFWGYLMQITYQTSAGAIILTDIV 282

Query: 100 FWGLLVPFLS-EHFKVNLIMASMHSVNAIFLLID 2
           FW ++VPFLS  HFK+N++M SMHS+NA+FLL+D
Sbjct: 283 FWCVIVPFLSISHFKLNMLMVSMHSLNAVFLLLD 316


>ref|XP_002301538.1| predicted protein [Populus trichocarpa] gi|222843264|gb|EEE80811.1|
           predicted protein [Populus trichocarpa]
          Length = 320

 Score =  199 bits (505), Expect = 5e-49
 Identities = 99/216 (45%), Positives = 138/216 (63%), Gaps = 3/216 (1%)
 Frame = -2

Query: 640 WQVPXXXXXXXXXXXXXXXXLSRWKRVALRSSALWLPCWRSIHPLWILVFRAFVALCMSW 461
           WQVP                + + K   L    LW P WR ++PLW+L +R F  LC+S 
Sbjct: 14  WQVPVCALAIICPSLLSFYIIKKAKTQPLYIHDLWKPRWRCLNPLWLLCYRFFAFLCLSP 73

Query: 460 ILFRTVLHDGLNAFYFYTQWTFTLVIIYFVIGACISAHGCWIYSKYHH-PDNEETNGFLN 284
           +L+R V  DG  AFYFYTQWTF L++IYF +G  ISA+GCW+  K     ++ E + FL 
Sbjct: 74  MLYRIVYLDGAFAFYFYTQWTFMLIMIYFALGTVISAYGCWVSLKQPAVSEHGENSVFLK 133

Query: 283 GNVEEHSSVT-LTYRTKQNRNMTKLQKYLEQEDKDQRAGFWGYAMQVIYQTSAGAVVLTD 107
            +VEE ++ T +TY+ K++    KL+ +  +E   +RAGFWGY MQ+IYQT AGAV+LTD
Sbjct: 134 RDVEEDATATSITYKEKKSGGTIKLRSHCAEEAIRERAGFWGYLMQIIYQTCAGAVILTD 193

Query: 106 VVFWGLLVPFLSE-HFKVNLIMASMHSVNAIFLLID 2
           ++FW ++VPFLS  H  +N +M  MHS+NA+FLL+D
Sbjct: 194 IIFWCIIVPFLSNTHLGLNALMGCMHSLNAVFLLLD 229


>gb|ABK92443.1| unknown [Populus trichocarpa]
          Length = 320

 Score =  198 bits (504), Expect = 6e-49
 Identities = 99/216 (45%), Positives = 137/216 (63%), Gaps = 3/216 (1%)
 Frame = -2

Query: 640 WQVPXXXXXXXXXXXXXXXXLSRWKRVALRSSALWLPCWRSIHPLWILVFRAFVALCMSW 461
           WQVP                + + K   L    LW P WR ++PLW+L +R F  LC+S 
Sbjct: 14  WQVPVCALAIICPSLLSFYIIKKAKTQPLYIHDLWKPRWRCLNPLWLLCYRFFAFLCLSP 73

Query: 460 ILFRTVLHDGLNAFYFYTQWTFTLVIIYFVIGACISAHGCWIYSKYHH-PDNEETNGFLN 284
           +L+R V  DG  AFYFYTQWTF L++IYF +G  ISA+GCW+  K     ++ E + FL 
Sbjct: 74  MLYRIVYLDGAFAFYFYTQWTFMLIMIYFALGTVISAYGCWVSLKQPAVSEHGENSVFLK 133

Query: 283 GNVEEHSSVT-LTYRTKQNRNMTKLQKYLEQEDKDQRAGFWGYAMQVIYQTSAGAVVLTD 107
            +VEE  + T +TY+ K++    KL+ +  +E   +RAGFWGY MQ+IYQT AGAV+LTD
Sbjct: 134 RDVEEDGTATSITYKEKKSGGTIKLRSHCAEEAIRERAGFWGYLMQIIYQTCAGAVILTD 193

Query: 106 VVFWGLLVPFLSE-HFKVNLIMASMHSVNAIFLLID 2
           ++FW ++VPFLS  H  +N +M  MHS+NA+FLL+D
Sbjct: 194 IIFWCIIVPFLSNTHLGLNALMGCMHSLNAVFLLLD 229


>ref|XP_003562532.1| PREDICTED: uncharacterized protein LOC100829367 [Brachypodium
           distachyon]
          Length = 323

 Score =  192 bits (489), Expect = 3e-47
 Identities = 95/188 (50%), Positives = 122/188 (64%), Gaps = 3/188 (1%)
 Frame = -2

Query: 556 LRSSALWLPCWRSIHPLWILVFRAFVALCMSWILFRTVLHDG--LNAFYFYTQWTFTLVI 383
           LR++ LW+PCW  +HP W+L +RAF     + +L R VL  G  L  FYFYTQWTF LV 
Sbjct: 44  LRATDLWVPCWSRLHPGWLLGYRAFALAAAAALLLRDVLAHGHGLFVFYFYTQWTFLLVT 103

Query: 382 IYFVIGACISAHGCWIYSKYHHPDNEETNGFLNGNVEEHSSVTLTYRTKQNRNMTKLQKY 203
           IYF     ISAHGCW YSK +    +E++GFLNG+VE     +     ++   + K+  Y
Sbjct: 104 IYFAFATAISAHGCWAYSKKNLRKADESHGFLNGDVENRDLSSSISGERKKDEIDKMTSY 163

Query: 202 LEQEDKDQRAGFWGYAMQVIYQTSAGAVVLTDVVFWGLLVPFL-SEHFKVNLIMASMHSV 26
            EQ   ++RAGFWG  MQ+IYQ SAGA +LTDV FWGLLVPF   + F + ++   MHS+
Sbjct: 164 YEQIANEKRAGFWGRCMQIIYQASAGATMLTDVTFWGLLVPFFYRDKFGLAMVTDGMHSL 223

Query: 25  NAIFLLID 2
           NAIFLLID
Sbjct: 224 NAIFLLID 231


>ref|NP_001144387.1| uncharacterized protein LOC100277315 [Zea mays]
           gi|195641390|gb|ACG40163.1| hypothetical protein [Zea
           mays]
          Length = 322

 Score =  192 bits (488), Expect = 4e-47
 Identities = 96/195 (49%), Positives = 131/195 (67%), Gaps = 4/195 (2%)
 Frame = -2

Query: 574 RWKRVA--LRSSALWLPCWRSIHPLWILVFRAFVALCMSWILFRTVLHDGLNAFYFYTQW 401
           R +R A  LR++ LW+ CW  +HP W+L +RAF       +L R ++  GL  FYFYTQW
Sbjct: 37  RLRRAAPPLRAADLWVSCWARLHPGWLLAYRAFAFAAAVALLARLLVGHGLTVFYFYTQW 96

Query: 400 TFTLVIIYFVIGACISAHGCWIYSKYHHPDNEETNGFLNGNVEEHSSVTLTYRTKQNRNM 221
           TF LV IYF     ISAHGCW+YS+     ++E++GFLN +V E+  V+ +   ++ ++ 
Sbjct: 97  TFLLVTIYFAFATAISAHGCWVYSRKSLRKSDESHGFLNADV-ENRDVSNSISGERKKDE 155

Query: 220 TKLQ-KYLEQEDKDQRAGFWGYAMQVIYQTSAGAVVLTDVVFWGLLVPFL-SEHFKVNLI 47
           TK+   Y EQ   ++RAGFWG+ MQ+IYQTSAGA +LTDV FWGLLVPF   + F + L+
Sbjct: 156 TKMMVSYYEQIVNERRAGFWGWCMQIIYQTSAGATMLTDVTFWGLLVPFFYRDKFGLALV 215

Query: 46  MASMHSVNAIFLLID 2
              MHS+NA+FLLID
Sbjct: 216 TDGMHSLNAVFLLID 230


Top