BLASTX nr result

ID: Dioscorea21_contig00000484 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00000484
         (1168 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002275720.1| PREDICTED: uncharacterized protein LOC100264...   133   7e-29
ref|XP_002530565.1| conserved hypothetical protein [Ricinus comm...   117   4e-24
ref|XP_002326373.1| predicted protein [Populus trichocarpa] gi|2...   112   1e-22
gb|ACF82655.1| unknown [Zea mays] gi|413922950|gb|AFW62882.1| hy...   101   3e-19
ref|XP_003575321.1| PREDICTED: uncharacterized protein LOC100842...    99   2e-18

>ref|XP_002275720.1| PREDICTED: uncharacterized protein LOC100264463 [Vitis vinifera]
           gi|296084275|emb|CBI24663.3| unnamed protein product
           [Vitis vinifera]
          Length = 280

 Score =  133 bits (335), Expect = 7e-29
 Identities = 67/142 (47%), Positives = 90/142 (63%), Gaps = 1/142 (0%)
 Frame = +3

Query: 369 YRRGSPVCVFGGKGDTEGDKEAFSWDSLKKAMEGFNKEPSVQDLLREQMQKQE-FXXXXX 545
           Y++  PVC+FGGKG +EGD EA  W +L+KAM  F KE SV+D+LR+Q++KQE F     
Sbjct: 66  YKQCMPVCLFGGKGQSEGDSEASPWKALEKAMGNFKKESSVEDVLRKQIEKQEYFDDGGS 125

Query: 546 XXXXXXXXXXXXXXXXXXXXXXIWDEVLQVFLATMAFIFVYIYMIRGAELIRLGRDYIKY 725
                                 I DE +QVFLAT+AFI +YIY++ G E++RL RDYIKY
Sbjct: 126 GGNPPSGGGGDSGGSEDEGLSGIMDEAVQVFLATVAFILLYIYLLDGEEMVRLARDYIKY 185

Query: 726 VLGGKASYRLERAMRQWQKLYK 791
           + GG+ S RL+RAM  W++  K
Sbjct: 186 LFGGQKSIRLQRAMSNWRRFLK 207


>ref|XP_002530565.1| conserved hypothetical protein [Ricinus communis]
           gi|223529864|gb|EEF31795.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 259

 Score =  117 bits (294), Expect = 4e-24
 Identities = 74/198 (37%), Positives = 106/198 (53%), Gaps = 3/198 (1%)
 Frame = +3

Query: 222 SLCWSNLRVERRIPPPSHYASLHGAFSCGSSTLKFQHHKPLRVLHSVPLYRRGSPVCVFG 401
           ++C   +R++  IP  S     +   S        Q+   ++   S   Y++ + VC+FG
Sbjct: 32  TMCRLPVRLKDNIPTTSLKLDANARVSS-------QYGVVMKQPQSARRYQQAAIVCLFG 84

Query: 402 GKGDTEGDKEAFSWDSLKKAMEGFNKEPSVQDLLREQMQKQEFXXXXXXXXXXXXXXXXX 581
           GK   + +KE FSW S +K ME F K  SV+D+LR+Q++KQEF                 
Sbjct: 85  GKDKADKNKEPFSW-SFEKVMENF-KGQSVEDVLRKQIEKQEFYDGGSGRNPPRGGGGGG 142

Query: 582 XXXXXXXXXX---IWDEVLQVFLATMAFIFVYIYMIRGAELIRLGRDYIKYVLGGKASYR 752
                        I DE LQV LAT+ FIF+YIY+I G EL RL +DYIKY+L G  S R
Sbjct: 143 DDAGESEDEGLAGIMDETLQVVLATIGFIFLYIYIITGEELTRLAKDYIKYLLKGSKSVR 202

Query: 753 LERAMRQWQKLYKSMVRT 806
           L+RAM +W++LY+ +  T
Sbjct: 203 LKRAMNKWKRLYQKLTET 220


>ref|XP_002326373.1| predicted protein [Populus trichocarpa] gi|222833566|gb|EEE72043.1|
           predicted protein [Populus trichocarpa]
          Length = 245

 Score =  112 bits (281), Expect = 1e-22
 Identities = 62/162 (38%), Positives = 94/162 (58%)
 Frame = +3

Query: 309 SSTLKFQHHKPLRVLHSVPLYRRGSPVCVFGGKGDTEGDKEAFSWDSLKKAMEGFNKEPS 488
           ++ LK Q  +P      V  YR GS VC+ GG+  +E D +  +W+ L+KAM  F K  S
Sbjct: 59  ATLLKHQKSEP------VVKYRNGSAVCLLGGEDKSEKDNQGLAWNPLEKAMGSF-KGQS 111

Query: 489 VQDLLREQMQKQEFXXXXXXXXXXXXXXXXXXXXXXXXXXXIWDEVLQVFLATMAFIFVY 668
           ++D+LR+Q++K+EF                           I DE +QV LAT+ FIF+Y
Sbjct: 112 IEDMLRQQIEKREFYDGGSEKNPPNGSGESEDEGLVG----IIDETMQVILATIGFIFLY 167

Query: 669 IYMIRGAELIRLGRDYIKYVLGGKASYRLERAMRQWQKLYKS 794
           +Y+I G EL RLG+DY+K++ G   S RL+RAM +W++ ++S
Sbjct: 168 VYIISGEELTRLGKDYLKFLFGKGKSVRLKRAMNKWKRFFQS 209


>gb|ACF82655.1| unknown [Zea mays] gi|413922950|gb|AFW62882.1| hypothetical protein
           ZEAMMB73_541431 [Zea mays]
          Length = 243

 Score =  101 bits (252), Expect = 3e-19
 Identities = 71/203 (34%), Positives = 101/203 (49%), Gaps = 3/203 (1%)
 Frame = +3

Query: 204 MSCIQASLCWSNLRVERRIPPPS-HYASLHGAFSCGSSTLKFQHHKPLRVLHSVPLYRRG 380
           MS  Q + C    RV    P P     S H  +S      + Q     R+L     ++R 
Sbjct: 2   MSYFQTTTCKPQSRVVVNKPIPGLGSTSQHPLYSHALRFHRLQQKVYPRLLLVAASHKRL 61

Query: 381 SPVCVFGGKGDTEGDKEAFSWDSLKKAMEGFNKEPSVQDLLREQMQK--QEFXXXXXXXX 554
           +PVCV  GKG+  G  +    +SLKKAM    K  S+QDLL+EQ+ K  ++         
Sbjct: 62  TPVCVLSGKGNA-GTADDPLMESLKKAMADAKKPRSIQDLLKEQVAKLREQASGGGGGNG 120

Query: 555 XXXXXXXXXXXXXXXXXXXIWDEVLQVFLATMAFIFVYIYMIRGAELIRLGRDYIKYVLG 734
                                DEV+QV LAT+AFI VYI++IRG EL RL RDY +Y++ 
Sbjct: 121 NRRGGSGGSGGPDDESFKEALDEVVQVILATVAFILVYIHIIRGEELYRLARDYTRYLVT 180

Query: 735 GKASYRLERAMRQWQKLYKSMVR 803
           GK + RL+R+M++W    +S ++
Sbjct: 181 GKRTARLKRSMQKWHNFSESFMQ 203


>ref|XP_003575321.1| PREDICTED: uncharacterized protein LOC100842576 [Brachypodium
           distachyon]
          Length = 253

 Score = 99.4 bits (246), Expect = 2e-18
 Identities = 71/201 (35%), Positives = 103/201 (51%), Gaps = 9/201 (4%)
 Frame = +3

Query: 204 MSCIQASLC--WSNLRVERRIPPPSHYASL--HGAFSCGSSTLKFQHHKPL---RVLHSV 362
           MS  QA+ C   + L ++R I        L  H  +S  S +L F   +     R++   
Sbjct: 1   MSYFQATTCKPHTGLILDRPITGLGKTCRLLPHAQYSLQSRSLGFHKLEKKIYPRLVLVA 60

Query: 363 PLYRRGSPVCVFGGKGDTEGDKEAFSWDSLKKAMEGFNKEPSVQDLLREQMQK--QEFXX 536
             ++R +PVC   GKG+ E D + F  D LKKAM    K  +VQD+L+EQ  K  ++   
Sbjct: 61  ASHKRLTPVCASSGKGNPETDNDPFM-DHLKKAMADAKKPRTVQDMLKEQFTKLREQASG 119

Query: 537 XXXXXXXXXXXXXXXXXXXXXXXXXIWDEVLQVFLATMAFIFVYIYMIRGAELIRLGRDY 716
                                      DE++QV LAT+AFI VYI++IRG EL RL RDY
Sbjct: 120 GGGGNGNSRGGNGGSGGPEDESFKESLDEIVQVILATVAFILVYIHIIRGEELYRLARDY 179

Query: 717 IKYVLGGKASYRLERAMRQWQ 779
            +Y++ GK + RL+R+M+QW+
Sbjct: 180 TRYLVTGKRTARLKRSMQQWR 200


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