BLASTX nr result

ID: Dioscorea21_contig00000472 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00000472
         (948 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002530163.1| ubiquitin-conjugating enzyme, putative [Rici...   273   3e-71
gb|ADU56174.1| ubiquitin-conjugating family protein [Jatropha cu...   271   1e-70
ref|XP_003537091.1| PREDICTED: ubiquitin-conjugating enzyme E2 v...   271   2e-70
gb|ACV49920.1| ubiquitin-conjugating enzyme variant [Citrus sine...   270   4e-70
gb|ACJ86246.1| unknown [Medicago truncatula] gi|388496758|gb|AFK...   270   4e-70

>ref|XP_002530163.1| ubiquitin-conjugating enzyme, putative [Ricinus communis]
           gi|223530324|gb|EEF32218.1| ubiquitin-conjugating
           enzyme, putative [Ricinus communis]
          Length = 147

 Score =  273 bits (699), Expect = 3e-71
 Identities = 131/147 (89%), Positives = 133/147 (90%)
 Frame = -1

Query: 828 MTLXXXXXXXXXVPRNFRXXXXXERGEKGIGDGTVSYGMDDGDDIYMRSWTGTVIGPHNT 649
           MTL         VPRNFR     ERGEKGIGDGTVSYGMDDGDDIYMRSWTGTVIGPHNT
Sbjct: 1   MTLGGSGGSSVVVPRNFRLLEELERGEKGIGDGTVSYGMDDGDDIYMRSWTGTVIGPHNT 60

Query: 648 VHEGRIYQLKLFCDKDYPEKPPSVRFHSRINMTCVNHETGMVEPKKFGLLANWQREYTME 469
           VHEGRIYQLKLFCDKDYPEKPPSVRFHSRINMTCVNHETG+VEPKKFGLLANWQREYTME
Sbjct: 61  VHEGRIYQLKLFCDKDYPEKPPSVRFHSRINMTCVNHETGVVEPKKFGLLANWQREYTME 120

Query: 468 DILTQLKKEMAAPHNRKLVQPPEGTFF 388
           DILTQLKKEMAAPHNRKLVQPPEGT+F
Sbjct: 121 DILTQLKKEMAAPHNRKLVQPPEGTYF 147


>gb|ADU56174.1| ubiquitin-conjugating family protein [Jatropha curcas]
           gi|317159571|gb|ADV04060.1| protein
           binding/ubiquitin-protein ligase 1 [Hevea brasiliensis]
          Length = 146

 Score =  271 bits (694), Expect = 1e-70
 Identities = 126/134 (94%), Positives = 129/134 (96%)
 Frame = -1

Query: 789 PRNFRXXXXXERGEKGIGDGTVSYGMDDGDDIYMRSWTGTVIGPHNTVHEGRIYQLKLFC 610
           PRNFR     ERGEKGIGDGTVSYGMDDGDDIYMRSWTGT+IGPHNTVHEGRIYQLKLFC
Sbjct: 13  PRNFRLLEELERGEKGIGDGTVSYGMDDGDDIYMRSWTGTIIGPHNTVHEGRIYQLKLFC 72

Query: 609 DKDYPEKPPSVRFHSRINMTCVNHETGMVEPKKFGLLANWQREYTMEDILTQLKKEMAAP 430
           DKDYPEKPPSVRFHSRINMTCVNHETG+VEPKKFGLLANWQREYTMEDILTQLKKEMAAP
Sbjct: 73  DKDYPEKPPSVRFHSRINMTCVNHETGVVEPKKFGLLANWQREYTMEDILTQLKKEMAAP 132

Query: 429 HNRKLVQPPEGTFF 388
           HNRKLVQPPEGT+F
Sbjct: 133 HNRKLVQPPEGTYF 146


>ref|XP_003537091.1| PREDICTED: ubiquitin-conjugating enzyme E2 variant 1D-like [Glycine
           max]
          Length = 201

 Score =  271 bits (693), Expect = 2e-70
 Identities = 125/134 (93%), Positives = 129/134 (96%)
 Frame = -1

Query: 789 PRNFRXXXXXERGEKGIGDGTVSYGMDDGDDIYMRSWTGTVIGPHNTVHEGRIYQLKLFC 610
           PRNFR     ERGEKGIGDGTVSYGMDDGDDIYMRSWTGT+IGPHNTVHEGRIYQLKLFC
Sbjct: 68  PRNFRLLEELERGEKGIGDGTVSYGMDDGDDIYMRSWTGTIIGPHNTVHEGRIYQLKLFC 127

Query: 609 DKDYPEKPPSVRFHSRINMTCVNHETGMVEPKKFGLLANWQREYTMEDILTQLKKEMAAP 430
           DKDYPEKPPSVRFHSR+NMTCVNHETG+VEPKKFGLLANWQREYTMEDILTQLKKEMAAP
Sbjct: 128 DKDYPEKPPSVRFHSRVNMTCVNHETGVVEPKKFGLLANWQREYTMEDILTQLKKEMAAP 187

Query: 429 HNRKLVQPPEGTFF 388
           HNRKLVQPPEGT+F
Sbjct: 188 HNRKLVQPPEGTYF 201


>gb|ACV49920.1| ubiquitin-conjugating enzyme variant [Citrus sinensis]
          Length = 146

 Score =  270 bits (690), Expect = 4e-70
 Identities = 125/134 (93%), Positives = 128/134 (95%)
 Frame = -1

Query: 789 PRNFRXXXXXERGEKGIGDGTVSYGMDDGDDIYMRSWTGTVIGPHNTVHEGRIYQLKLFC 610
           PRNFR     ERGEKGIGDGTVSYGMDDGDDIYMRSWTGT+IGPHNTVHEGRIYQLKLFC
Sbjct: 13  PRNFRLLEELERGEKGIGDGTVSYGMDDGDDIYMRSWTGTIIGPHNTVHEGRIYQLKLFC 72

Query: 609 DKDYPEKPPSVRFHSRINMTCVNHETGMVEPKKFGLLANWQREYTMEDILTQLKKEMAAP 430
           DKDYPEKPPSVRFHSRINMTCVNHETG+VEPKKFGLL NWQREYTMEDILTQLKKEMAAP
Sbjct: 73  DKDYPEKPPSVRFHSRINMTCVNHETGVVEPKKFGLLVNWQREYTMEDILTQLKKEMAAP 132

Query: 429 HNRKLVQPPEGTFF 388
           HNRKLVQPPEGT+F
Sbjct: 133 HNRKLVQPPEGTYF 146


>gb|ACJ86246.1| unknown [Medicago truncatula] gi|388496758|gb|AFK36445.1| unknown
           [Medicago truncatula] gi|388520687|gb|AFK48405.1|
           unknown [Medicago truncatula]
          Length = 146

 Score =  270 bits (690), Expect = 4e-70
 Identities = 125/134 (93%), Positives = 129/134 (96%)
 Frame = -1

Query: 789 PRNFRXXXXXERGEKGIGDGTVSYGMDDGDDIYMRSWTGTVIGPHNTVHEGRIYQLKLFC 610
           PRNFR     ERGEKGIGDGTVSYGMDDGDDIYMRSWTGT+IGPHNTVHEGRIYQLKLFC
Sbjct: 13  PRNFRLLEELERGEKGIGDGTVSYGMDDGDDIYMRSWTGTIIGPHNTVHEGRIYQLKLFC 72

Query: 609 DKDYPEKPPSVRFHSRINMTCVNHETGMVEPKKFGLLANWQREYTMEDILTQLKKEMAAP 430
           DKDYPEKPPSVRFHSRINMTCVNHETG+VEPKKFGLLANWQREY+MEDILTQLKKEMAAP
Sbjct: 73  DKDYPEKPPSVRFHSRINMTCVNHETGVVEPKKFGLLANWQREYSMEDILTQLKKEMAAP 132

Query: 429 HNRKLVQPPEGTFF 388
           HNRKLVQPPEGT+F
Sbjct: 133 HNRKLVQPPEGTYF 146


Top