BLASTX nr result

ID: Dioscorea21_contig00000470 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00000470
         (864 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003570649.1| PREDICTED: F-box/kelch-repeat protein SKIP11...   396   e-108
ref|NP_001168670.1| uncharacterized protein LOC100382458 [Zea ma...   393   e-107
dbj|BAD16457.1| kelch repeat-containing F-box-like [Oryza sativa...   391   e-106
emb|CBI15248.3| unnamed protein product [Vitis vinifera]              385   e-105
ref|XP_002274899.1| PREDICTED: F-box/kelch-repeat protein SKIP11...   378   e-103

>ref|XP_003570649.1| PREDICTED: F-box/kelch-repeat protein SKIP11-like [Brachypodium
           distachyon]
          Length = 427

 Score =  396 bits (1017), Expect = e-108
 Identities = 200/298 (67%), Positives = 226/298 (75%), Gaps = 11/298 (3%)
 Frame = -2

Query: 863 RPLTNSCEKESGWVYMTYKLLDISNGKQQEASSRHDEQGGDXXXXXXXXXXXSD------ 702
           R L  S E+ES   YMTY LL+I+  K+       ++ G              D      
Sbjct: 11  RSLPTSSEQESRLAYMTYHLLEITRTKRPSGVLAIEQDGIAVVAVSAKRPKSEDKNNDEP 70

Query: 701 ---QGGDGQ-YSDTTSLIHPIGRDNSINCLLRCSRSDYGAIASLTKGFRSLIRGGELYKL 534
              QG +GQ YSD+++LI  IGRDNSINCL RCSRSDYG+IASL + FRSL+R G LYK 
Sbjct: 71  VDCQGSNGQGYSDSSTLISSIGRDNSINCLARCSRSDYGSIASLNRNFRSLVRDGGLYKE 130

Query: 533 RRLNKIVEHWIYFSCNVLEWEAYDPYRGRWMTLPRMPPNECFMCSDKESLAVGTELLVFG 354
           RR   I EHW+YFSCNV EWEAYDPYR RWMTLPRMPPNECFMCSDKESLAVGTELLVFG
Sbjct: 131 RRRLGIAEHWVYFSCNVQEWEAYDPYRSRWMTLPRMPPNECFMCSDKESLAVGTELLVFG 190

Query: 353 KEVTSHIVLRYSILTNSWSAGVKMNSPRCLFGSASLGEKAILAGGTDAHGTILDSAELYN 174
           KE+ +HIVL YSILTNSWS GV+MN+PRCLFGSAS GEKAI+AGG DA G +L SAELYN
Sbjct: 191 KEILAHIVLSYSILTNSWSRGVEMNAPRCLFGSASFGEKAIIAGGMDASGQVLRSAELYN 250

Query: 173 SETQTWVTLPNMNRPRKMCSGVFMDEKFYVIGGMA-SNTEVLTCGEEYDLDKGVWKII 3
           SET+ W TL +MN+ R+MCSGVFMD KFYVIGGMA SNTEVLTCGEEYDLDKG W++I
Sbjct: 251 SETKKWTTLTSMNKARRMCSGVFMDGKFYVIGGMAGSNTEVLTCGEEYDLDKGTWRVI 308


>ref|NP_001168670.1| uncharacterized protein LOC100382458 [Zea mays]
           gi|223944871|gb|ACN26519.1| unknown [Zea mays]
           gi|223950089|gb|ACN29128.1| unknown [Zea mays]
           gi|224030281|gb|ACN34216.1| unknown [Zea mays]
           gi|413924555|gb|AFW64487.1| hypothetical protein
           ZEAMMB73_909642 [Zea mays] gi|413924556|gb|AFW64488.1|
           hypothetical protein ZEAMMB73_909642 [Zea mays]
           gi|413924557|gb|AFW64489.1| hypothetical protein
           ZEAMMB73_909642 [Zea mays] gi|413924558|gb|AFW64490.1|
           hypothetical protein ZEAMMB73_909642 [Zea mays]
          Length = 423

 Score =  393 bits (1010), Expect = e-107
 Identities = 198/294 (67%), Positives = 225/294 (76%), Gaps = 7/294 (2%)
 Frame = -2

Query: 863 RPLTNSCEKESGWVYMTYKLLDISNGKQQEA--SSRHDEQGGDXXXXXXXXXXXSD---- 702
           R L  SCE+ES   YMTY LL+I+  K+     S  HD                S+    
Sbjct: 11  RSLPGSCEQESRLAYMTYHLLEITRSKRPPGTLSIEHDVVAALTKRTKSSEHQNSEALDC 70

Query: 701 QGGDGQY-SDTTSLIHPIGRDNSINCLLRCSRSDYGAIASLTKGFRSLIRGGELYKLRRL 525
           QG +GQ  SD+++LI  IGRDNSINCL RCSRSDYG+IASL + FRSL+R GELYK RR 
Sbjct: 71  QGSNGQGDSDSSTLISSIGRDNSINCLARCSRSDYGSIASLNRSFRSLVRSGELYKERRQ 130

Query: 524 NKIVEHWIYFSCNVLEWEAYDPYRGRWMTLPRMPPNECFMCSDKESLAVGTELLVFGKEV 345
             I EHW+YFSCNV EWEAYDPYR RWMTLPRMP NECFM SDKESLAVGTELLVFGKE+
Sbjct: 131 QGISEHWVYFSCNVQEWEAYDPYRSRWMTLPRMPRNECFMHSDKESLAVGTELLVFGKEI 190

Query: 344 TSHIVLRYSILTNSWSAGVKMNSPRCLFGSASLGEKAILAGGTDAHGTILDSAELYNSET 165
            SHI+L YSILT+SWS GV+MN+PRCLFGSAS GEKAI+AGG DA G +L S ELYNSET
Sbjct: 191 LSHIILSYSILTHSWSRGVEMNAPRCLFGSASFGEKAIIAGGMDADGRVLRSVELYNSET 250

Query: 164 QTWVTLPNMNRPRKMCSGVFMDEKFYVIGGMASNTEVLTCGEEYDLDKGVWKII 3
           + W TLP+MN+ R+ CSGVFMD KFYVIGGMASNTEVLTCGEEYDLD+G W++I
Sbjct: 251 KRWTTLPSMNKARRKCSGVFMDGKFYVIGGMASNTEVLTCGEEYDLDRGTWRVI 304


>dbj|BAD16457.1| kelch repeat-containing F-box-like [Oryza sativa Japonica Group]
          Length = 426

 Score =  391 bits (1004), Expect = e-106
 Identities = 193/297 (64%), Positives = 226/297 (76%), Gaps = 10/297 (3%)
 Frame = -2

Query: 863 RPLTNSCEKESGWVYMTYKLLDISNGKQQEASSRHDEQG---------GDXXXXXXXXXX 711
           R L +SC++ES   YMTY LL+I+  K+  ++ R +                        
Sbjct: 11  RSLPSSCDQESRLAYMTYHLLEITRSKRISSTPRIEPDSVAAVAVLTKRPKSARNHECEQ 70

Query: 710 XSDQGGDGQ-YSDTTSLIHPIGRDNSINCLLRCSRSDYGAIASLTKGFRSLIRGGELYKL 534
              QG + Q +SD+++LI  IGRDNSI+CL RCSRSDYG+IAS+ + F SL+R GELYK 
Sbjct: 71  LDCQGSNDQGFSDSSTLISSIGRDNSISCLARCSRSDYGSIASVNRNFHSLVRSGELYKE 130

Query: 533 RRLNKIVEHWIYFSCNVLEWEAYDPYRGRWMTLPRMPPNECFMCSDKESLAVGTELLVFG 354
           RR   I EHW+YFSCNV EWEAYDPYR RWMTLP+MP NECFMCSDKESLAVGTELLVFG
Sbjct: 131 RRQLGIAEHWVYFSCNVQEWEAYDPYRSRWMTLPKMPHNECFMCSDKESLAVGTELLVFG 190

Query: 353 KEVTSHIVLRYSILTNSWSAGVKMNSPRCLFGSASLGEKAILAGGTDAHGTILDSAELYN 174
           KE+ SHIVL YSILTNSWS GV MN+PRCLFGSAS GEKAI+AGG DA G +L SAELYN
Sbjct: 191 KEILSHIVLSYSILTNSWSPGVDMNAPRCLFGSASFGEKAIVAGGMDAQGRVLRSAELYN 250

Query: 173 SETQTWVTLPNMNRPRKMCSGVFMDEKFYVIGGMASNTEVLTCGEEYDLDKGVWKII 3
           SET+ W+TLP MN+ R+MCSGVFM+ KFYVIGGMASNTEVLTCGEEYDL+KG W++I
Sbjct: 251 SETKRWITLPCMNKARRMCSGVFMNGKFYVIGGMASNTEVLTCGEEYDLEKGTWRVI 307


>emb|CBI15248.3| unnamed protein product [Vitis vinifera]
          Length = 482

 Score =  385 bits (989), Expect = e-105
 Identities = 187/288 (64%), Positives = 220/288 (76%), Gaps = 1/288 (0%)
 Frame = -2

Query: 863 RPLTNSCEKESGWVYMTYKLLDISNGKQQEASSRHDEQGGDXXXXXXXXXXXSDQGGDGQ 684
           R L N+CE+ES W+Y T+ ++++SN K+       +   G            +     G 
Sbjct: 76  RDLPNACEQESKWIYNTFLVIELSNSKRPLEDGEDETMQGLHDLSLSQANQSNTHHDTGD 135

Query: 683 YSDTTSLIHPIGRDNSINCLLRCSRSDYGAIASLTKGFRSLIRGGELYKLRRLNKIVEHW 504
            SD +SLI  IGRDNSINCLL+CSRSDYG+IASL + FRSLIRGGELY+LRR   IVEHW
Sbjct: 136 QSDLSSLISQIGRDNSINCLLQCSRSDYGSIASLNRSFRSLIRGGELYRLRRKLGIVEHW 195

Query: 503 IYFSCNVLEWEAYDPYRGRWMTLPRMPPNECFMCSDKESLAVGTELLVFGKEVTSHIVLR 324
           +YFSC++L+WEA+DP R RWM LPRMP  ECFMCSDKESLAVGTELLVFGKEVTSH+V +
Sbjct: 196 VYFSCDLLQWEAFDPIRRRWMHLPRMPSYECFMCSDKESLAVGTELLVFGKEVTSHVVYK 255

Query: 323 YSILTNSWSAGVKMNSPRCLFGSASLGEKAILAGGTDAHGTILDSAELYNSETQTWVTLP 144
           YSILTNSWS+G+ MNSPRCLFGSASLGE AILAGG D  G IL SAELYNS+T TWVTLP
Sbjct: 256 YSILTNSWSSGMNMNSPRCLFGSASLGEIAILAGGCDPRGNILSSAELYNSDTGTWVTLP 315

Query: 143 NMNRPRKMCSGVFMDEKFYVIGGM-ASNTEVLTCGEEYDLDKGVWKII 3
           +MN+PRKMCSG+FMD KFYVIGG+   N+  LTCGE YDL+   W+ I
Sbjct: 316 SMNKPRKMCSGIFMDRKFYVIGGIGVGNSNSLTCGEVYDLEMRTWREI 363


>ref|XP_002274899.1| PREDICTED: F-box/kelch-repeat protein SKIP11-like [Vitis vinifera]
          Length = 443

 Score =  378 bits (971), Expect = e-103
 Identities = 189/304 (62%), Positives = 223/304 (73%), Gaps = 17/304 (5%)
 Frame = -2

Query: 863 RPLTNSCEKESGWVYMTYKLLDISNGKQ-----QEASSRHDEQGGDXXXXXXXXXXXSDQ 699
           R L N+CE+ES W+Y T+ ++++SN K+     ++   R   +  D            D 
Sbjct: 11  RDLPNACEQESKWIYNTFLVIELSNSKRPLEDGEDVGLRKFSKPSDGHETEETMQGLHDL 70

Query: 698 G-----------GDGQYSDTTSLIHPIGRDNSINCLLRCSRSDYGAIASLTKGFRSLIRG 552
                         G  SD +SLI  IGRDNSINCLL+CSRSDYG+IASL + FRSLIRG
Sbjct: 71  SLSQANQSNTHHDTGDQSDLSSLISQIGRDNSINCLLQCSRSDYGSIASLNRSFRSLIRG 130

Query: 551 GELYKLRRLNKIVEHWIYFSCNVLEWEAYDPYRGRWMTLPRMPPNECFMCSDKESLAVGT 372
           GELY+LRR   IVEHW+YFSC++L+WEA+DP R RWM LPRMP  ECFMCSDKESLAVGT
Sbjct: 131 GELYRLRRKLGIVEHWVYFSCDLLQWEAFDPIRRRWMHLPRMPSYECFMCSDKESLAVGT 190

Query: 371 ELLVFGKEVTSHIVLRYSILTNSWSAGVKMNSPRCLFGSASLGEKAILAGGTDAHGTILD 192
           ELLVFGKEVTSH+V +YSILTNSWS+G+ MNSPRCLFGSASLGE AILAGG D  G IL 
Sbjct: 191 ELLVFGKEVTSHVVYKYSILTNSWSSGMNMNSPRCLFGSASLGEIAILAGGCDPRGNILS 250

Query: 191 SAELYNSETQTWVTLPNMNRPRKMCSGVFMDEKFYVIGGM-ASNTEVLTCGEEYDLDKGV 15
           SAELYNS+T TWVTLP+MN+PRKMCSG+FMD KFYVIGG+   N+  LTCGE YDL+   
Sbjct: 251 SAELYNSDTGTWVTLPSMNKPRKMCSGIFMDRKFYVIGGIGVGNSNSLTCGEVYDLEMRT 310

Query: 14  WKII 3
           W+ I
Sbjct: 311 WREI 314


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