BLASTX nr result

ID: Dioscorea21_contig00000408 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00000408
         (638 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003554560.1| PREDICTED: probable pre-mRNA-splicing factor...   161   1e-37
ref|XP_003554559.1| PREDICTED: probable pre-mRNA-splicing factor...   161   1e-37
ref|XP_003521600.1| PREDICTED: probable pre-mRNA-splicing factor...   160   1e-37
ref|XP_003518717.1| PREDICTED: probable pre-mRNA-splicing factor...   160   1e-37
gb|EEC75115.1| hypothetical protein OsI_11295 [Oryza sativa Indi...   160   2e-37

>ref|XP_003554560.1| PREDICTED: probable pre-mRNA-splicing factor ATP-dependent RNA
           helicase-like isoform 2 [Glycine max]
          Length = 713

 Score =  161 bits (407), Expect = 1e-37
 Identities = 74/91 (81%), Positives = 81/91 (89%)
 Frame = -1

Query: 638 QVAHLESKGEYMTVKDNQSVHLHPSTCLDHKPEWVVYNEYVLTSRDFIRTVSDIRGDWLV 459
           QVAHLE  G Y+TVKDNQ VHLHPS CLDHKPEWV+YNEYVLTSR+FIRTV+DIRG+WLV
Sbjct: 615 QVAHLERTGHYLTVKDNQVVHLHPSNCLDHKPEWVIYNEYVLTSRNFIRTVTDIRGEWLV 674

Query: 458 DIAPHYYDLSNFPPGEAREVLERLYAKR*QE 366
           DIAPHYYDLSNFP  EA+ VLERLY KR +E
Sbjct: 675 DIAPHYYDLSNFPQCEAKRVLERLYKKREKE 705


>ref|XP_003554559.1| PREDICTED: probable pre-mRNA-splicing factor ATP-dependent RNA
           helicase-like isoform 1 [Glycine max]
          Length = 721

 Score =  161 bits (407), Expect = 1e-37
 Identities = 74/91 (81%), Positives = 81/91 (89%)
 Frame = -1

Query: 638 QVAHLESKGEYMTVKDNQSVHLHPSTCLDHKPEWVVYNEYVLTSRDFIRTVSDIRGDWLV 459
           QVAHLE  G Y+TVKDNQ VHLHPS CLDHKPEWV+YNEYVLTSR+FIRTV+DIRG+WLV
Sbjct: 623 QVAHLERTGHYLTVKDNQVVHLHPSNCLDHKPEWVIYNEYVLTSRNFIRTVTDIRGEWLV 682

Query: 458 DIAPHYYDLSNFPPGEAREVLERLYAKR*QE 366
           DIAPHYYDLSNFP  EA+ VLERLY KR +E
Sbjct: 683 DIAPHYYDLSNFPQCEAKRVLERLYKKREKE 713


>ref|XP_003521600.1| PREDICTED: probable pre-mRNA-splicing factor ATP-dependent RNA
           helicase-like [Glycine max]
          Length = 720

 Score =  160 bits (406), Expect = 1e-37
 Identities = 73/91 (80%), Positives = 81/91 (89%)
 Frame = -1

Query: 638 QVAHLESKGEYMTVKDNQSVHLHPSTCLDHKPEWVVYNEYVLTSRDFIRTVSDIRGDWLV 459
           QVAHLE  G Y+TVKDNQ VHLHPS CLDHKPEWV+YNEYVLTSR+FIRTV+DIRG+WLV
Sbjct: 622 QVAHLERTGHYLTVKDNQVVHLHPSNCLDHKPEWVIYNEYVLTSRNFIRTVTDIRGEWLV 681

Query: 458 DIAPHYYDLSNFPPGEAREVLERLYAKR*QE 366
           D+APHYYDLSNFP  EA+ VLERLY KR +E
Sbjct: 682 DVAPHYYDLSNFPQCEAKRVLERLYKKREKE 712


>ref|XP_003518717.1| PREDICTED: probable pre-mRNA-splicing factor ATP-dependent RNA
           helicase-like [Glycine max]
          Length = 722

 Score =  160 bits (406), Expect = 1e-37
 Identities = 73/91 (80%), Positives = 81/91 (89%)
 Frame = -1

Query: 638 QVAHLESKGEYMTVKDNQSVHLHPSTCLDHKPEWVVYNEYVLTSRDFIRTVSDIRGDWLV 459
           QVAHLE  G Y+TVKDNQ VHLHPS CLDHKPEWV+YNEYVLTSR+FIRTV+DIRG+WLV
Sbjct: 624 QVAHLERTGHYLTVKDNQVVHLHPSNCLDHKPEWVIYNEYVLTSRNFIRTVTDIRGEWLV 683

Query: 458 DIAPHYYDLSNFPPGEAREVLERLYAKR*QE 366
           D+APHYYDLSNFP  EA+ VLERLY KR +E
Sbjct: 684 DVAPHYYDLSNFPQCEAKRVLERLYKKREKE 714


>gb|EEC75115.1| hypothetical protein OsI_11295 [Oryza sativa Indica Group]
          Length = 790

 Score =  160 bits (405), Expect = 2e-37
 Identities = 72/91 (79%), Positives = 81/91 (89%)
 Frame = -1

Query: 638 QVAHLESKGEYMTVKDNQSVHLHPSTCLDHKPEWVVYNEYVLTSRDFIRTVSDIRGDWLV 459
           QVAHLE  G Y+TVKDNQ VHLHPS CLDHKPEWV+YNEYVLT+R+FIRTV+DIRGDWL+
Sbjct: 694 QVAHLERTGHYLTVKDNQVVHLHPSNCLDHKPEWVIYNEYVLTTRNFIRTVTDIRGDWLI 753

Query: 458 DIAPHYYDLSNFPPGEAREVLERLYAKR*QE 366
           D+APHYYDLSNFP  EA+ VLERLY KR +E
Sbjct: 754 DVAPHYYDLSNFPSCEAKRVLERLYNKRERE 784


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