BLASTX nr result

ID: Dioscorea21_contig00000398 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00000398
         (2033 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002281919.1| PREDICTED: ornithine carbamoyltransferase, c...   285   e-140
gb|ABK93198.1| unknown [Populus trichocarpa]                          276   e-137
ref|XP_002307666.1| predicted protein [Populus trichocarpa] gi|2...   272   e-136
ref|XP_002454422.1| hypothetical protein SORBIDRAFT_04g030600 [S...   274   e-135
ref|XP_002510416.1| ornithine carbamoyltransferase, putative [Ri...   273   e-135

>ref|XP_002281919.1| PREDICTED: ornithine carbamoyltransferase, chloroplastic [Vitis
            vinifera] gi|302142520|emb|CBI19723.3| unnamed protein
            product [Vitis vinifera]
          Length = 378

 Score =  285 bits (729), Expect(2) = e-140
 Identities = 152/200 (76%), Positives = 168/200 (84%), Gaps = 12/200 (6%)
 Frame = -3

Query: 2031 SSASSFSGRLIRLPS-----SPARLAASPF---RVSCVMASP----SALGDQAKTGLKDF 1888
            SS+SSFSG+  R P+     S +  A SP    R+SC  +S     SA+  + K+GLKDF
Sbjct: 19   SSSSSFSGQAFRQPAPFPGISLSSSAISPTLRRRISCQTSSAISPSSAVNVKEKSGLKDF 78

Query: 1887 LHISDFDKPTIMGILDRALEVKALLKSGNRDFQPFKGKSMAMIFAKPSMRTRVSFETGFF 1708
            LHI+DFDK TI+ ILDRALEVKALLKSG R F PFKGK+MAMIFAKPSMRTRVSFETGFF
Sbjct: 79   LHINDFDKTTILKILDRALEVKALLKSGERTFLPFKGKTMAMIFAKPSMRTRVSFETGFF 138

Query: 1707 LLGGHAIYLGPDDIQMGKREETRDVARVLSGYNDIIMARVFAHQDILDLARYASVPVVNG 1528
            LLGGHA+YLGPDDIQMGKREETRDVARVLS YNDIIMARVFAHQDILDLA+YA+VPV+NG
Sbjct: 139  LLGGHALYLGPDDIQMGKREETRDVARVLSCYNDIIMARVFAHQDILDLAKYATVPVING 198

Query: 1527 LTDYNHPCQIMADALTIIEH 1468
            LTDYNHPCQIMADALTIIEH
Sbjct: 199  LTDYNHPCQIMADALTIIEH 218



 Score =  243 bits (620), Expect(2) = e-140
 Identities = 114/129 (88%), Positives = 125/129 (96%)
 Frame = -2

Query: 1387 HFVCACPKGFEPDKKTVEKARSAGISKIEITNDPREAVRGANVVYSDVWASMGQKEEAAY 1208
            HFVCACPKGFEPD+KTV+KA+ AGISKIEITNDP+EAVRGA+VVYSDVWASMGQKEEA+Y
Sbjct: 250  HFVCACPKGFEPDEKTVQKAQQAGISKIEITNDPKEAVRGADVVYSDVWASMGQKEEASY 309

Query: 1207 RKQKFQGFQIDEALMELAGPKAYFMHCLPAERGVEVTDGVIEAPNSIVFPQAENRMHAQN 1028
            R+Q FQGFQ+DE LM+LAGPKAYFMHCLPAERGVEVTDGV+EAPNSIVFPQAENRMHAQN
Sbjct: 310  RRQVFQGFQVDEPLMKLAGPKAYFMHCLPAERGVEVTDGVLEAPNSIVFPQAENRMHAQN 369

Query: 1027 AIMLHLFGL 1001
            AIMLH+ GL
Sbjct: 370  AIMLHVLGL 378


>gb|ABK93198.1| unknown [Populus trichocarpa]
          Length = 378

 Score =  276 bits (705), Expect(2) = e-137
 Identities = 142/182 (78%), Positives = 158/182 (86%), Gaps = 8/182 (4%)
 Frame = -3

Query: 1989 SSPARLAASPFRVSCVMAS--------PSALGDQAKTGLKDFLHISDFDKPTIMGILDRA 1834
            S P+R  AS  R+SC ++S        PS++   AK G++DFLHISDFDK TIM ILDRA
Sbjct: 39   SVPSR--ASRGRISCQISSSSATSPPPPSSVNGPAKAGMEDFLHISDFDKATIMKILDRA 96

Query: 1833 LEVKALLKSGNRDFQPFKGKSMAMIFAKPSMRTRVSFETGFFLLGGHAIYLGPDDIQMGK 1654
             EVKA++KSG+R F PFKGK+MAMIFAKPSMRTRVSFETGFFLLGGHAIYLGPDDIQMGK
Sbjct: 97   AEVKAVIKSGDRTFLPFKGKTMAMIFAKPSMRTRVSFETGFFLLGGHAIYLGPDDIQMGK 156

Query: 1653 REETRDVARVLSGYNDIIMARVFAHQDILDLARYASVPVVNGLTDYNHPCQIMADALTII 1474
            REETRDVARVLS YNDIIMARVFAHQDILDLA++A+VPV+NGLTDYNHPCQIMADALTII
Sbjct: 157  REETRDVARVLSRYNDIIMARVFAHQDILDLAKHATVPVINGLTDYNHPCQIMADALTII 216

Query: 1473 EH 1468
            EH
Sbjct: 217  EH 218



 Score =  241 bits (614), Expect(2) = e-137
 Identities = 115/129 (89%), Positives = 123/129 (95%)
 Frame = -2

Query: 1387 HFVCACPKGFEPDKKTVEKARSAGISKIEITNDPREAVRGANVVYSDVWASMGQKEEAAY 1208
            HFVCACPKGFEPD KTV+KA+ AGISKIEITNDP+EAVRGA+VVYSDVWASMGQKEEAA+
Sbjct: 250  HFVCACPKGFEPDAKTVQKAQQAGISKIEITNDPQEAVRGADVVYSDVWASMGQKEEAAH 309

Query: 1207 RKQKFQGFQIDEALMELAGPKAYFMHCLPAERGVEVTDGVIEAPNSIVFPQAENRMHAQN 1028
            R+Q FQGFQ+DE LM+LAGPKAYFMHCLPAERGVEVTDGVIEAPNSIVFPQAENRMHAQN
Sbjct: 310  RRQVFQGFQVDENLMKLAGPKAYFMHCLPAERGVEVTDGVIEAPNSIVFPQAENRMHAQN 369

Query: 1027 AIMLHLFGL 1001
            AIMLH  GL
Sbjct: 370  AIMLHALGL 378


>ref|XP_002307666.1| predicted protein [Populus trichocarpa] gi|222857115|gb|EEE94662.1|
            predicted protein [Populus trichocarpa]
          Length = 374

 Score =  272 bits (695), Expect(2) = e-136
 Identities = 140/178 (78%), Positives = 154/178 (86%), Gaps = 4/178 (2%)
 Frame = -3

Query: 1989 SSPARLAASPFRVSCVMASPSALG----DQAKTGLKDFLHISDFDKPTIMGILDRALEVK 1822
            S P+R  AS  R+SC ++S SA           G++DFLHISDFDK TIM ILDRA EVK
Sbjct: 39   SVPSR--ASRGRISCQISSSSATSPPPPSSVNAGMEDFLHISDFDKATIMKILDRAAEVK 96

Query: 1821 ALLKSGNRDFQPFKGKSMAMIFAKPSMRTRVSFETGFFLLGGHAIYLGPDDIQMGKREET 1642
            A++KSG+R F PFKGK+MAMIFAKPSMRTRVSFETGFFLLGGHAIYLGPDDIQMGKREET
Sbjct: 97   AVIKSGDRTFLPFKGKTMAMIFAKPSMRTRVSFETGFFLLGGHAIYLGPDDIQMGKREET 156

Query: 1641 RDVARVLSGYNDIIMARVFAHQDILDLARYASVPVVNGLTDYNHPCQIMADALTIIEH 1468
            RDVARVLS YNDIIMARVFAHQDILDLA++A+VPV+NGLTDYNHPCQIMADALTIIEH
Sbjct: 157  RDVARVLSRYNDIIMARVFAHQDILDLAKHATVPVINGLTDYNHPCQIMADALTIIEH 214



 Score =  241 bits (614), Expect(2) = e-136
 Identities = 115/129 (89%), Positives = 123/129 (95%)
 Frame = -2

Query: 1387 HFVCACPKGFEPDKKTVEKARSAGISKIEITNDPREAVRGANVVYSDVWASMGQKEEAAY 1208
            HFVCACPKGFEPD KTV+KA+ AGISKIEITNDP+EAVRGA+VVYSDVWASMGQKEEAA+
Sbjct: 246  HFVCACPKGFEPDAKTVQKAQQAGISKIEITNDPQEAVRGADVVYSDVWASMGQKEEAAH 305

Query: 1207 RKQKFQGFQIDEALMELAGPKAYFMHCLPAERGVEVTDGVIEAPNSIVFPQAENRMHAQN 1028
            R+Q FQGFQ+DE LM+LAGPKAYFMHCLPAERGVEVTDGVIEAPNSIVFPQAENRMHAQN
Sbjct: 306  RRQVFQGFQVDENLMKLAGPKAYFMHCLPAERGVEVTDGVIEAPNSIVFPQAENRMHAQN 365

Query: 1027 AIMLHLFGL 1001
            AIMLH  GL
Sbjct: 366  AIMLHALGL 374


>ref|XP_002454422.1| hypothetical protein SORBIDRAFT_04g030600 [Sorghum bicolor]
            gi|241934253|gb|EES07398.1| hypothetical protein
            SORBIDRAFT_04g030600 [Sorghum bicolor]
          Length = 373

 Score =  274 bits (700), Expect(2) = e-135
 Identities = 144/189 (76%), Positives = 156/189 (82%), Gaps = 13/189 (6%)
 Frame = -3

Query: 1995 LPSSP------ARLAASPFR----VSCVMASPS---ALGDQAKTGLKDFLHISDFDKPTI 1855
            LP SP      A  AASP       +  ++SP+   A G  AK   KDFLHI+DFDK TI
Sbjct: 25   LPPSPRTARPIAANAASPVARRGVAAAAVSSPAVSAAAGKDAKQAPKDFLHINDFDKDTI 84

Query: 1854 MGILDRALEVKALLKSGNRDFQPFKGKSMAMIFAKPSMRTRVSFETGFFLLGGHAIYLGP 1675
            M IL+RA+EVKA +KSG+R FQPFKGKSMAMIFAKPSMRTRVSFETGFFLLGGHAIYLGP
Sbjct: 85   MNILNRAIEVKAAIKSGDRSFQPFKGKSMAMIFAKPSMRTRVSFETGFFLLGGHAIYLGP 144

Query: 1674 DDIQMGKREETRDVARVLSGYNDIIMARVFAHQDILDLARYASVPVVNGLTDYNHPCQIM 1495
            DDIQMGKREETRDVARVLSGYNDIIMARVFAHQDILDLA YA VPV+NGLTDYNHPCQIM
Sbjct: 145  DDIQMGKREETRDVARVLSGYNDIIMARVFAHQDILDLANYAPVPVINGLTDYNHPCQIM 204

Query: 1494 ADALTIIEH 1468
            ADALT++EH
Sbjct: 205  ADALTMLEH 213



 Score =  236 bits (602), Expect(2) = e-135
 Identities = 113/128 (88%), Positives = 120/128 (93%)
 Frame = -2

Query: 1387 HFVCACPKGFEPDKKTVEKARSAGISKIEITNDPREAVRGANVVYSDVWASMGQKEEAAY 1208
            HFVCACPKGFEPD KTVE ARSAGISKIEITNDPREAV+GA+VVY+DVWASMGQKEEA Y
Sbjct: 245  HFVCACPKGFEPDAKTVEIARSAGISKIEITNDPREAVKGADVVYTDVWASMGQKEEADY 304

Query: 1207 RKQKFQGFQIDEALMELAGPKAYFMHCLPAERGVEVTDGVIEAPNSIVFPQAENRMHAQN 1028
            RKQKFQGF +DEALME+AG +AY MHCLPAERGVEVTDG IEAPNSIVFPQAENRMHAQN
Sbjct: 305  RKQKFQGFTVDEALMEIAGSQAYLMHCLPAERGVEVTDGAIEAPNSIVFPQAENRMHAQN 364

Query: 1027 AIMLHLFG 1004
            AIMLH+ G
Sbjct: 365  AIMLHVLG 372


>ref|XP_002510416.1| ornithine carbamoyltransferase, putative [Ricinus communis]
            gi|223551117|gb|EEF52603.1| ornithine
            carbamoyltransferase, putative [Ricinus communis]
          Length = 378

 Score =  273 bits (697), Expect(2) = e-135
 Identities = 144/197 (73%), Positives = 163/197 (82%), Gaps = 10/197 (5%)
 Frame = -3

Query: 2028 SASSFSGRLIRLPSSPARLAASPF-----RVSCVMASP-----SALGDQAKTGLKDFLHI 1879
            S+S+F+  L+   +  + + AS       R+SC  +S      S++  +AKT LKDF+HI
Sbjct: 22   SSSAFTSNLLSRHARLSTVTASSQAIIRGRISCQTSSATSSPSSSVNGKAKTELKDFVHI 81

Query: 1878 SDFDKPTIMGILDRALEVKALLKSGNRDFQPFKGKSMAMIFAKPSMRTRVSFETGFFLLG 1699
            SDFDK TIM ILDRA EVKALLKSG+R F PFKGK+MAMIFAKPSMRTRVSFETGFFLLG
Sbjct: 82   SDFDKATIMKILDRAAEVKALLKSGDRSFLPFKGKTMAMIFAKPSMRTRVSFETGFFLLG 141

Query: 1698 GHAIYLGPDDIQMGKREETRDVARVLSGYNDIIMARVFAHQDILDLARYASVPVVNGLTD 1519
            GHAIYLGPDDIQMGKREET DVARVLS YND+IMARVF+HQDILDLA+YA+VPVVNGLTD
Sbjct: 142  GHAIYLGPDDIQMGKREETCDVARVLSRYNDMIMARVFSHQDILDLAKYATVPVVNGLTD 201

Query: 1518 YNHPCQIMADALTIIEH 1468
            YNHPCQIMADALTIIEH
Sbjct: 202  YNHPCQIMADALTIIEH 218



 Score =  237 bits (604), Expect(2) = e-135
 Identities = 111/129 (86%), Positives = 123/129 (95%)
 Frame = -2

Query: 1387 HFVCACPKGFEPDKKTVEKARSAGISKIEITNDPREAVRGANVVYSDVWASMGQKEEAAY 1208
            HF+C CPKGFEPD +TV+KA+ AGISKIEITNDP+EAVRGA+VVYSDVWASMGQKEEAA+
Sbjct: 250  HFICVCPKGFEPDAETVKKAQEAGISKIEITNDPKEAVRGADVVYSDVWASMGQKEEAAH 309

Query: 1207 RKQKFQGFQIDEALMELAGPKAYFMHCLPAERGVEVTDGVIEAPNSIVFPQAENRMHAQN 1028
            R++ FQGFQ+DE LM+LAGPKAYFMHCLPAERGVEVTDGVIEAPNSIVFPQAENRMHAQN
Sbjct: 310  RRKAFQGFQVDEDLMKLAGPKAYFMHCLPAERGVEVTDGVIEAPNSIVFPQAENRMHAQN 369

Query: 1027 AIMLHLFGL 1001
            AIMLH+ GL
Sbjct: 370  AIMLHVLGL 378


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