BLASTX nr result

ID: Dioscorea21_contig00000393 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00000393
         (257 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002304526.1| predicted protein [Populus trichocarpa] gi|2...   145   3e-33
ref|NP_568928.1| CAAX amino terminal protease family protein [Ar...   144   6e-33
dbj|BAB09848.1| unnamed protein product [Arabidopsis thaliana]        144   6e-33
ref|XP_002864700.1| CAAX amino terminal protease family protein ...   144   8e-33
ref|XP_002298001.1| predicted protein [Populus trichocarpa] gi|2...   144   1e-32

>ref|XP_002304526.1| predicted protein [Populus trichocarpa] gi|222841958|gb|EEE79505.1|
           predicted protein [Populus trichocarpa]
          Length = 343

 Score =  145 bits (366), Expect = 3e-33
 Identities = 70/85 (82%), Positives = 79/85 (92%)
 Frame = -2

Query: 256 VAMALYAVVVSICAPVWEEIVFRGFLLPSLTRYMSLWSSILVSALAFALVHFNSQRLLPL 77
           VAM LYA+VVS+CAPVWEEIVFRGFLLPSLTRYM +W +ILVS++AFALVHFN QR+LPL
Sbjct: 247 VAMVLYAIVVSVCAPVWEEIVFRGFLLPSLTRYMPVWCAILVSSVAFALVHFNVQRMLPL 306

Query: 76  ICLGVVMGIVFARSRNLLASMLLHS 2
           I LGVVMG++FARSRNLL SMLLHS
Sbjct: 307 IFLGVVMGVIFARSRNLLPSMLLHS 331


>ref|NP_568928.1| CAAX amino terminal protease family protein [Arabidopsis thaliana]
           gi|17528994|gb|AAL38707.1| unknown protein [Arabidopsis
           thaliana] gi|20465443|gb|AAM20181.1| unknown protein
           [Arabidopsis thaliana] gi|21554615|gb|AAM63634.1|
           unknown [Arabidopsis thaliana]
           gi|332009990|gb|AED97373.1| CAAX amino terminal protease
           family protein [Arabidopsis thaliana]
          Length = 347

 Score =  144 bits (364), Expect = 6e-33
 Identities = 70/85 (82%), Positives = 79/85 (92%)
 Frame = -2

Query: 256 VAMALYAVVVSICAPVWEEIVFRGFLLPSLTRYMSLWSSILVSALAFALVHFNSQRLLPL 77
           VAMALYAVVVSICAPVWEEIVFRGFLLPSLTRYM +W +ILVS++AFAL HFN QR+LPL
Sbjct: 251 VAMALYAVVVSICAPVWEEIVFRGFLLPSLTRYMPVWCAILVSSIAFALAHFNVQRMLPL 310

Query: 76  ICLGVVMGIVFARSRNLLASMLLHS 2
           + LGVV+G++FARSRNLL SMLLHS
Sbjct: 311 VFLGVVLGLIFARSRNLLPSMLLHS 335


>dbj|BAB09848.1| unnamed protein product [Arabidopsis thaliana]
          Length = 312

 Score =  144 bits (364), Expect = 6e-33
 Identities = 70/85 (82%), Positives = 79/85 (92%)
 Frame = -2

Query: 256 VAMALYAVVVSICAPVWEEIVFRGFLLPSLTRYMSLWSSILVSALAFALVHFNSQRLLPL 77
           VAMALYAVVVSICAPVWEEIVFRGFLLPSLTRYM +W +ILVS++AFAL HFN QR+LPL
Sbjct: 216 VAMALYAVVVSICAPVWEEIVFRGFLLPSLTRYMPVWCAILVSSIAFALAHFNVQRMLPL 275

Query: 76  ICLGVVMGIVFARSRNLLASMLLHS 2
           + LGVV+G++FARSRNLL SMLLHS
Sbjct: 276 VFLGVVLGLIFARSRNLLPSMLLHS 300


>ref|XP_002864700.1| CAAX amino terminal protease family protein [Arabidopsis lyrata
           subsp. lyrata] gi|297310535|gb|EFH40959.1| CAAX amino
           terminal protease family protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 347

 Score =  144 bits (363), Expect = 8e-33
 Identities = 70/85 (82%), Positives = 79/85 (92%)
 Frame = -2

Query: 256 VAMALYAVVVSICAPVWEEIVFRGFLLPSLTRYMSLWSSILVSALAFALVHFNSQRLLPL 77
           VAMALYAVVVSICAPVWEEIVFRGFLLPSLTRYM +W +ILVS++AFAL HFN QR+LPL
Sbjct: 251 VAMALYAVVVSICAPVWEEIVFRGFLLPSLTRYMPVWCAILVSSVAFALAHFNVQRMLPL 310

Query: 76  ICLGVVMGIVFARSRNLLASMLLHS 2
           + LGVV+G++FARSRNLL SMLLHS
Sbjct: 311 VFLGVVLGLIFARSRNLLPSMLLHS 335


>ref|XP_002298001.1| predicted protein [Populus trichocarpa] gi|222845259|gb|EEE82806.1|
           predicted protein [Populus trichocarpa]
          Length = 300

 Score =  144 bits (362), Expect = 1e-32
 Identities = 69/85 (81%), Positives = 78/85 (91%)
 Frame = -2

Query: 256 VAMALYAVVVSICAPVWEEIVFRGFLLPSLTRYMSLWSSILVSALAFALVHFNSQRLLPL 77
           VAMALYA+VVS+CAPVWEEIVFRGFLLPSLTRYM +W +ILVS++AFAL HFN QR+LPL
Sbjct: 204 VAMALYAIVVSVCAPVWEEIVFRGFLLPSLTRYMPVWCAILVSSVAFALAHFNVQRMLPL 263

Query: 76  ICLGVVMGIVFARSRNLLASMLLHS 2
           I LGVVMG++F RSRNLL SMLLHS
Sbjct: 264 IFLGVVMGVIFTRSRNLLPSMLLHS 288


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