BLASTX nr result

ID: Dioscorea21_contig00000373 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00000373
         (592 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003518717.1| PREDICTED: probable pre-mRNA-splicing factor...   395   e-108
ref|XP_003554560.1| PREDICTED: probable pre-mRNA-splicing factor...   394   e-108
ref|XP_003554559.1| PREDICTED: probable pre-mRNA-splicing factor...   394   e-108
ref|XP_003521600.1| PREDICTED: probable pre-mRNA-splicing factor...   394   e-108
emb|CBI36976.3| unnamed protein product [Vitis vinifera]              393   e-107

>ref|XP_003518717.1| PREDICTED: probable pre-mRNA-splicing factor ATP-dependent RNA
            helicase-like [Glycine max]
          Length = 722

 Score =  395 bits (1014), Expect = e-108
 Identities = 181/196 (92%), Positives = 192/196 (97%)
 Frame = -2

Query: 591  VPNCFLRPRDAQKAADEAKARFGHIDGDHLTLLNVYHAYKQNNEDPSWCYENFINQRTLK 412
            VPNCF+RPR+AQKAADEAKARFGHIDGDHLTLLNVYHAYKQNNEDPSWCY+NF+N R LK
Sbjct: 520  VPNCFVRPREAQKAADEAKARFGHIDGDHLTLLNVYHAYKQNNEDPSWCYDNFVNHRALK 579

Query: 411  AADNVRQQLMRIMARFNLKLCSTDFNSRDYYVNIRKAMLSGYFMQVAHLERTGHYLTVKD 232
            +ADNVRQQL+RIMARFNLKLCSTDFNSRDYYVNIRKAML+GYFMQVAHLERTGHYLTVKD
Sbjct: 580  SADNVRQQLVRIMARFNLKLCSTDFNSRDYYVNIRKAMLAGYFMQVAHLERTGHYLTVKD 639

Query: 231  NQVVHLHPSNCLDHKPEWVIYNEFVLTSRNFIRTVTDIRGEWLIDIAPHYYDLSNFPPCE 52
            NQVVHLHPSNCLDHKPEWVIYNE+VLTSRNFIRTVTDIRGEWL+D+APHYYDLSNFP CE
Sbjct: 640  NQVVHLHPSNCLDHKPEWVIYNEYVLTSRNFIRTVTDIRGEWLVDVAPHYYDLSNFPQCE 699

Query: 51   ARRVLERLYNKREKEK 4
            A+RVLERLY KREKEK
Sbjct: 700  AKRVLERLYKKREKEK 715


>ref|XP_003554560.1| PREDICTED: probable pre-mRNA-splicing factor ATP-dependent RNA
            helicase-like isoform 2 [Glycine max]
          Length = 713

 Score =  394 bits (1012), Expect = e-108
 Identities = 181/196 (92%), Positives = 192/196 (97%)
 Frame = -2

Query: 591  VPNCFLRPRDAQKAADEAKARFGHIDGDHLTLLNVYHAYKQNNEDPSWCYENFINQRTLK 412
            VPNCF+RPR+AQKAADEAKARFGHIDGDHLTLLNVYHAYKQNNEDPSWCY+NF+N R LK
Sbjct: 511  VPNCFVRPREAQKAADEAKARFGHIDGDHLTLLNVYHAYKQNNEDPSWCYDNFVNHRALK 570

Query: 411  AADNVRQQLMRIMARFNLKLCSTDFNSRDYYVNIRKAMLSGYFMQVAHLERTGHYLTVKD 232
            +ADNVRQQL+RIM+RFNLKLCSTDFNSRDYYVNIRKAML+GYFMQVAHLERTGHYLTVKD
Sbjct: 571  SADNVRQQLVRIMSRFNLKLCSTDFNSRDYYVNIRKAMLAGYFMQVAHLERTGHYLTVKD 630

Query: 231  NQVVHLHPSNCLDHKPEWVIYNEFVLTSRNFIRTVTDIRGEWLIDIAPHYYDLSNFPPCE 52
            NQVVHLHPSNCLDHKPEWVIYNE+VLTSRNFIRTVTDIRGEWL+DIAPHYYDLSNFP CE
Sbjct: 631  NQVVHLHPSNCLDHKPEWVIYNEYVLTSRNFIRTVTDIRGEWLVDIAPHYYDLSNFPQCE 690

Query: 51   ARRVLERLYNKREKEK 4
            A+RVLERLY KREKEK
Sbjct: 691  AKRVLERLYKKREKEK 706


>ref|XP_003554559.1| PREDICTED: probable pre-mRNA-splicing factor ATP-dependent RNA
            helicase-like isoform 1 [Glycine max]
          Length = 721

 Score =  394 bits (1012), Expect = e-108
 Identities = 181/196 (92%), Positives = 192/196 (97%)
 Frame = -2

Query: 591  VPNCFLRPRDAQKAADEAKARFGHIDGDHLTLLNVYHAYKQNNEDPSWCYENFINQRTLK 412
            VPNCF+RPR+AQKAADEAKARFGHIDGDHLTLLNVYHAYKQNNEDPSWCY+NF+N R LK
Sbjct: 519  VPNCFVRPREAQKAADEAKARFGHIDGDHLTLLNVYHAYKQNNEDPSWCYDNFVNHRALK 578

Query: 411  AADNVRQQLMRIMARFNLKLCSTDFNSRDYYVNIRKAMLSGYFMQVAHLERTGHYLTVKD 232
            +ADNVRQQL+RIM+RFNLKLCSTDFNSRDYYVNIRKAML+GYFMQVAHLERTGHYLTVKD
Sbjct: 579  SADNVRQQLVRIMSRFNLKLCSTDFNSRDYYVNIRKAMLAGYFMQVAHLERTGHYLTVKD 638

Query: 231  NQVVHLHPSNCLDHKPEWVIYNEFVLTSRNFIRTVTDIRGEWLIDIAPHYYDLSNFPPCE 52
            NQVVHLHPSNCLDHKPEWVIYNE+VLTSRNFIRTVTDIRGEWL+DIAPHYYDLSNFP CE
Sbjct: 639  NQVVHLHPSNCLDHKPEWVIYNEYVLTSRNFIRTVTDIRGEWLVDIAPHYYDLSNFPQCE 698

Query: 51   ARRVLERLYNKREKEK 4
            A+RVLERLY KREKEK
Sbjct: 699  AKRVLERLYKKREKEK 714


>ref|XP_003521600.1| PREDICTED: probable pre-mRNA-splicing factor ATP-dependent RNA
            helicase-like [Glycine max]
          Length = 720

 Score =  394 bits (1011), Expect = e-108
 Identities = 180/196 (91%), Positives = 192/196 (97%)
 Frame = -2

Query: 591  VPNCFLRPRDAQKAADEAKARFGHIDGDHLTLLNVYHAYKQNNEDPSWCYENFINQRTLK 412
            VPNCF+RPR+AQKAADEAKARFGHIDGDHLTLLNVYHAYKQNNEDPSWCY+NF+N R LK
Sbjct: 518  VPNCFVRPREAQKAADEAKARFGHIDGDHLTLLNVYHAYKQNNEDPSWCYDNFVNHRALK 577

Query: 411  AADNVRQQLMRIMARFNLKLCSTDFNSRDYYVNIRKAMLSGYFMQVAHLERTGHYLTVKD 232
            +ADNVRQQL+RIM+RFNLKLCSTDFNSRDYYVNIRKAML+GYFMQVAHLERTGHYLTVKD
Sbjct: 578  SADNVRQQLVRIMSRFNLKLCSTDFNSRDYYVNIRKAMLAGYFMQVAHLERTGHYLTVKD 637

Query: 231  NQVVHLHPSNCLDHKPEWVIYNEFVLTSRNFIRTVTDIRGEWLIDIAPHYYDLSNFPPCE 52
            NQVVHLHPSNCLDHKPEWVIYNE+VLTSRNFIRTVTDIRGEWL+D+APHYYDLSNFP CE
Sbjct: 638  NQVVHLHPSNCLDHKPEWVIYNEYVLTSRNFIRTVTDIRGEWLVDVAPHYYDLSNFPQCE 697

Query: 51   ARRVLERLYNKREKEK 4
            A+RVLERLY KREKEK
Sbjct: 698  AKRVLERLYKKREKEK 713


>emb|CBI36976.3| unnamed protein product [Vitis vinifera]
          Length = 687

 Score =  393 bits (1010), Expect = e-107
 Identities = 178/196 (90%), Positives = 193/196 (98%)
 Frame = -2

Query: 591  VPNCFLRPRDAQKAADEAKARFGHIDGDHLTLLNVYHAYKQNNEDPSWCYENFINQRTLK 412
            VPNCF+RPR+AQKAADEAKARFGHIDGDHLTLLNVYHAYKQNNEDPSWCYENF+NQR LK
Sbjct: 485  VPNCFVRPREAQKAADEAKARFGHIDGDHLTLLNVYHAYKQNNEDPSWCYENFVNQRALK 544

Query: 411  AADNVRQQLMRIMARFNLKLCSTDFNSRDYYVNIRKAMLSGYFMQVAHLERTGHYLTVKD 232
            AADNVRQQL+RIMARFNLKLCSTDFNSRDYY+NIRKAML+GYFMQVAHLERTGHYLTVKD
Sbjct: 545  AADNVRQQLVRIMARFNLKLCSTDFNSRDYYINIRKAMLAGYFMQVAHLERTGHYLTVKD 604

Query: 231  NQVVHLHPSNCLDHKPEWVIYNEFVLTSRNFIRTVTDIRGEWLIDIAPHYYDLSNFPPCE 52
            NQVVHLHPSNCLDHKPEWVIYNE+VLTSRNFIRTVTD+RGEWL+D+APHYYDL+NFP CE
Sbjct: 605  NQVVHLHPSNCLDHKPEWVIYNEYVLTSRNFIRTVTDVRGEWLVDVAPHYYDLANFPNCE 664

Query: 51   ARRVLERLYNKREKEK 4
            A+RVLE+LY KREK++
Sbjct: 665  AKRVLEKLYKKREKDR 680


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