BLASTX nr result

ID: Dioscorea21_contig00000343 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00000343
         (1544 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002511799.1| cop9 signalosome complex subunit, putative [...   655   0.0  
ref|XP_002272895.1| PREDICTED: COP9 signalosome complex subunit ...   654   0.0  
emb|CAY85529.1| Cop11 protein [Carica papaya]                         652   0.0  
emb|CAN74681.1| hypothetical protein VITISV_025856 [Vitis vinifera]   645   0.0  
ref|XP_003521302.1| PREDICTED: COP9 signalosome complex subunit ...   632   e-178

>ref|XP_002511799.1| cop9 signalosome complex subunit, putative [Ricinus communis]
            gi|223548979|gb|EEF50468.1| cop9 signalosome complex
            subunit, putative [Ricinus communis]
          Length = 433

 Score =  655 bits (1691), Expect = 0.0
 Identities = 325/432 (75%), Positives = 367/432 (84%)
 Frame = +3

Query: 108  MDGEDEPMGSNGVEDTEKPTPKPAAALGGEHLDVEAYAGLYTGRTKITRLLFIADRCGNE 287
            MD +DE + +NG E T +  P     + GE LD+EAYAGLYTGRTKITRLLFIAD C N 
Sbjct: 1    MDADDE-IYANGGESTSRNRP----IISGEQLDIEAYAGLYTGRTKITRLLFIADHCDNP 55

Query: 288  SLQLEALRMAYDEIRKSENTCLHREVAQKIAGRLGPDYLLDQAWADAVDRRAXXXXXXXX 467
            ++QLEALRMAY+EI+K ENT L REV QKI GRLGP+Y +D  W D VDRRA        
Sbjct: 56   TMQLEALRMAYEEIKKGENTQLFREVVQKIDGRLGPNYSMDNTWCDTVDRRAEQRKERLE 115

Query: 468  XXXXGYRTNLIKESIRMGYNDFGDFYYSHGQLGDAFKSYVRTRDYCTTSKHITQMCLNVI 647
                 YRTNLIKESIRMGYNDFGDFYY+HG LG+AFKSYVRTRDYCTTSKHI  MC++ I
Sbjct: 116  NELNAYRTNLIKESIRMGYNDFGDFYYAHGALGEAFKSYVRTRDYCTTSKHIIHMCMSAI 175

Query: 648  LVSIELGQFMHVSNYVSKAEQTPDSQDPVTVAKLKCALGLAFLETKKYKLAARKFLETGP 827
            LVSIE+GQF HV++YVSKAEQTP++ DP+TVAKL+CA GLA LE +KYKLAARKFLE  P
Sbjct: 176  LVSIEMGQFTHVTSYVSKAEQTPEALDPITVAKLRCAAGLAHLEARKYKLAARKFLEVAP 235

Query: 828  ELANNYTEVIAPQDVGTYGGLCALASFDRTELKNKVIDNINFRNFLELVPEIRELIHDFY 1007
            EL N+YTEVIAPQDV TYGGLCALASF+RTELKNKVIDN+NFRNFLELVPE+RELIHDFY
Sbjct: 236  ELGNSYTEVIAPQDVATYGGLCALASFERTELKNKVIDNLNFRNFLELVPEVRELIHDFY 295

Query: 1008 ASHYASCLGYLESLKHNLMLDIHLYDHVEILYTQIRHKAIIQYTHPFISVNLLTMADAFK 1187
            +SHYASCL YL +LK NL+LDIHL+DHVE LY QIR+KA+IQYTHPF+SV+L  MA+AFK
Sbjct: 296  SSHYASCLDYLGNLKANLLLDIHLHDHVETLYDQIRNKALIQYTHPFVSVDLHMMANAFK 355

Query: 1188 TTVTGLEKELEALITENQIQARIDSHNKILYARHADQRNATFQRVLQTGEEFNRDAKAML 1367
            T+V GLEKELEALIT+NQIQARIDSHNKILYARHADQRNATFQRVLQTG EF+RD +AML
Sbjct: 356  TSVAGLEKELEALITDNQIQARIDSHNKILYARHADQRNATFQRVLQTGNEFDRDVRAML 415

Query: 1368 LRANLLKHEQNL 1403
            LRANL+KHE NL
Sbjct: 416  LRANLIKHEYNL 427


>ref|XP_002272895.1| PREDICTED: COP9 signalosome complex subunit 1 [Vitis vinifera]
            gi|296089065|emb|CBI38768.3| unnamed protein product
            [Vitis vinifera]
          Length = 441

 Score =  654 bits (1686), Expect = 0.0
 Identities = 325/435 (74%), Positives = 364/435 (83%), Gaps = 3/435 (0%)
 Frame = +3

Query: 108  MDGEDEPMGSNGVEDTEK---PTPKPAAALGGEHLDVEAYAGLYTGRTKITRLLFIADRC 278
            M+GE+E      +++         +    + GE LD+EAYA LY+GRTKITRLLFIADRC
Sbjct: 1    MEGEEESSAGAMIDEIYSNGGDAKRNRPIISGEALDIEAYASLYSGRTKITRLLFIADRC 60

Query: 279  GNESLQLEALRMAYDEIRKSENTCLHREVAQKIAGRLGPDYLLDQAWADAVDRRAXXXXX 458
             N  +Q+EA RMAYDEI+K ENT L+REV QKI GRLGP Y LD  W ++V+RRA     
Sbjct: 61   ENRQMQMEAYRMAYDEIKKGENTQLYREVVQKIDGRLGPQYGLDLVWTESVERRADQRKE 120

Query: 459  XXXXXXXGYRTNLIKESIRMGYNDFGDFYYSHGQLGDAFKSYVRTRDYCTTSKHITQMCL 638
                    YRTNLIKESIRMGYNDFGDFYY+HG L DAFK+YVRTRDYCTTSKHI  MCL
Sbjct: 121  KLENELNAYRTNLIKESIRMGYNDFGDFYYAHGLLADAFKNYVRTRDYCTTSKHIIHMCL 180

Query: 639  NVILVSIELGQFMHVSNYVSKAEQTPDSQDPVTVAKLKCALGLAFLETKKYKLAARKFLE 818
            N ILVSIE+GQF HV++YVSKAEQTP++ DPVTVAKL+CA GLA LE KKYKLAARKFLE
Sbjct: 181  NAILVSIEMGQFTHVTSYVSKAEQTPEALDPVTVAKLRCAAGLAHLEAKKYKLAARKFLE 240

Query: 819  TGPELANNYTEVIAPQDVGTYGGLCALASFDRTELKNKVIDNINFRNFLELVPEIRELIH 998
            TG EL NNYTEVIAPQDV TYGGLCALASFDRTELKNKVIDN+NFRNFLELVPE+RELIH
Sbjct: 241  TGAELGNNYTEVIAPQDVATYGGLCALASFDRTELKNKVIDNLNFRNFLELVPEVRELIH 300

Query: 999  DFYASHYASCLGYLESLKHNLMLDIHLYDHVEILYTQIRHKAIIQYTHPFISVNLLTMAD 1178
            DFY+SHYASCL YL +LK NL+LDIHL+DHVE+LY QIRHKA+IQYTHPF+SV+L  MA+
Sbjct: 301  DFYSSHYASCLDYLGNLKTNLLLDIHLHDHVEMLYNQIRHKALIQYTHPFVSVDLRMMAN 360

Query: 1179 AFKTTVTGLEKELEALITENQIQARIDSHNKILYARHADQRNATFQRVLQTGEEFNRDAK 1358
            AFKT+V GLEKELEALIT+NQIQARIDSHNKILYARHADQRNATFQRVLQTG EF+RD +
Sbjct: 361  AFKTSVAGLEKELEALITDNQIQARIDSHNKILYARHADQRNATFQRVLQTGNEFDRDVR 420

Query: 1359 AMLLRANLLKHEQNL 1403
            AMLLRANLLKHE NL
Sbjct: 421  AMLLRANLLKHEYNL 435


>emb|CAY85529.1| Cop11 protein [Carica papaya]
          Length = 440

 Score =  652 bits (1682), Expect = 0.0
 Identities = 326/427 (76%), Positives = 364/427 (85%)
 Frame = +3

Query: 123  EPMGSNGVEDTEKPTPKPAAALGGEHLDVEAYAGLYTGRTKITRLLFIADRCGNESLQLE 302
            E + +NG E+ ++  P     + GE LD+EAYA LY+GRTKI RLLFIADRCGN S+QLE
Sbjct: 12   EEIYANGDENKQRHRP----IISGEQLDIEAYAALYSGRTKIMRLLFIADRCGNASMQLE 67

Query: 303  ALRMAYDEIRKSENTCLHREVAQKIAGRLGPDYLLDQAWADAVDRRAXXXXXXXXXXXXG 482
            ALRMAYDEI+K ENT L REV QKI GRLG +Y  D AWAD+VDRRA             
Sbjct: 68   ALRMAYDEIKKGENTQLFREVVQKIDGRLGTNYGPDPAWADSVDRRADLRKEKLESELNA 127

Query: 483  YRTNLIKESIRMGYNDFGDFYYSHGQLGDAFKSYVRTRDYCTTSKHITQMCLNVILVSIE 662
            YRTNLIKESIRMGYNDFGDFYY+HGQLG+AFK+YVRTRDYCTT+KHI  MCLN ILVSIE
Sbjct: 128  YRTNLIKESIRMGYNDFGDFYYAHGQLGEAFKNYVRTRDYCTTAKHIIHMCLNAILVSIE 187

Query: 663  LGQFMHVSNYVSKAEQTPDSQDPVTVAKLKCALGLAFLETKKYKLAARKFLETGPELANN 842
            +GQF HV++YVSKAEQTP++ DPVTVAKL+CA GLA LE KKYKLAARKFLETG EL NN
Sbjct: 188  MGQFTHVTSYVSKAEQTPEALDPVTVAKLRCAAGLAHLEAKKYKLAARKFLETGAELGNN 247

Query: 843  YTEVIAPQDVGTYGGLCALASFDRTELKNKVIDNINFRNFLELVPEIRELIHDFYASHYA 1022
            YTEVIAPQDV TYGGLCALASFDRTELK  +  N+NFRNFLELVPE+RELIHDFY+SHYA
Sbjct: 248  YTEVIAPQDVATYGGLCALASFDRTELKASIEYNLNFRNFLELVPEVRELIHDFYSSHYA 307

Query: 1023 SCLGYLESLKHNLMLDIHLYDHVEILYTQIRHKAIIQYTHPFISVNLLTMADAFKTTVTG 1202
            SCL YL +LK NL+LDIHL+DHVE+LY QIRHKA+IQYTHPF+SV+L  MA+AFKT+V G
Sbjct: 308  SCLDYLGNLKTNLLLDIHLHDHVEMLYNQIRHKALIQYTHPFVSVDLRMMANAFKTSVAG 367

Query: 1203 LEKELEALITENQIQARIDSHNKILYARHADQRNATFQRVLQTGEEFNRDAKAMLLRANL 1382
            LEKELEALIT+NQIQARIDSHNKILYARHADQRNATFQRVLQTG EF+RD +AMLLRANL
Sbjct: 368  LEKELEALITDNQIQARIDSHNKILYARHADQRNATFQRVLQTGNEFDRDVRAMLLRANL 427

Query: 1383 LKHEQNL 1403
            LKHE NL
Sbjct: 428  LKHEYNL 434


>emb|CAN74681.1| hypothetical protein VITISV_025856 [Vitis vinifera]
          Length = 451

 Score =  645 bits (1665), Expect = 0.0
 Identities = 325/445 (73%), Positives = 364/445 (81%), Gaps = 13/445 (2%)
 Frame = +3

Query: 108  MDGEDEPMGSNGVEDTEK---PTPKPAAALGGEHLDVEAYAGLYTGRTKITRLLFIADRC 278
            M+GE+E      +++         +    + GE LD+EAYA LY+GRTKITRLLFIADRC
Sbjct: 1    MEGEEESSAGAMIDEIYSNGGDAXRNRPIISGEALDIEAYASLYSGRTKITRLLFIADRC 60

Query: 279  GNESLQLEALRMAYDEIRKSENTCLHREVAQKIAGRLGPDYLLDQAWADAVDRRAXXXXX 458
             N  +Q+EA RMAYDEI+K ENT L+REV QKI GRLGP Y LD  W ++V+RRA     
Sbjct: 61   ENRQMQMEAYRMAYDEIKKGENTQLYREVVQKIDGRLGPQYGLDLVWTESVERRADQRKE 120

Query: 459  XXXXXXXGYRTNLIKESIRMGYNDFGDFYYSHGQLGDAFKSYVRTRDYCTTSKHITQMCL 638
                    YRTNLIKESIRMGYNDFGDFYY+HG L DAFK+YVRTRDYCTTSKHI  MCL
Sbjct: 121  KLENELNAYRTNLIKESIRMGYNDFGDFYYAHGLLADAFKNYVRTRDYCTTSKHIIHMCL 180

Query: 639  NVILVSIELGQFMHVSNYVSKAEQTPDSQDPVTVAKLKCALGLAFLETKKYKLAARKFLE 818
            N ILVSIE+GQF HV++YVSKAEQTP++ DPVTVAKL+CA GLA LE KKYKLAARKFLE
Sbjct: 181  NAILVSIEMGQFTHVTSYVSKAEQTPEALDPVTVAKLRCAAGLAHLEAKKYKLAARKFLE 240

Query: 819  TGPELANNYTEVIAPQDVGTYGGLCALASFDRTELK----------NKVIDNINFRNFLE 968
            TG EL NNYTEVIAPQDV TYGGLCALASFDRTELK          NKVIDN+NFRNFLE
Sbjct: 241  TGAELGNNYTEVIAPQDVATYGGLCALASFDRTELKASIECFSFSINKVIDNLNFRNFLE 300

Query: 969  LVPEIRELIHDFYASHYASCLGYLESLKHNLMLDIHLYDHVEILYTQIRHKAIIQYTHPF 1148
            LVPE+RELIHDFY+SHYASCL YL +LK NL+LDIHL+DHVE+LY QIRHKA+IQYTHPF
Sbjct: 301  LVPEVRELIHDFYSSHYASCLDYLGNLKTNLLLDIHLHDHVEMLYNQIRHKALIQYTHPF 360

Query: 1149 ISVNLLTMADAFKTTVTGLEKELEALITENQIQARIDSHNKILYARHADQRNATFQRVLQ 1328
            +SV+L  MA+AFKT+V GLEKELEALIT+NQIQARIDSHNKILYARHADQRNATFQRVLQ
Sbjct: 361  VSVDLRMMANAFKTSVAGLEKELEALITDNQIQARIDSHNKILYARHADQRNATFQRVLQ 420

Query: 1329 TGEEFNRDAKAMLLRANLLKHEQNL 1403
            TG EF+RD +AMLLRANLLKHE NL
Sbjct: 421  TGNEFDRDVRAMLLRANLLKHEYNL 445


>ref|XP_003521302.1| PREDICTED: COP9 signalosome complex subunit 1-like [Glycine max]
          Length = 444

 Score =  632 bits (1629), Expect = e-178
 Identities = 317/440 (72%), Positives = 367/440 (83%), Gaps = 8/440 (1%)
 Frame = +3

Query: 108  MDGEDEPMG--------SNGVEDTEKPTPKPAAALGGEHLDVEAYAGLYTGRTKITRLLF 263
            MDG+DE  G        + G +D +K + +  A + G+ +D+EAYA LY+GRTKI RLLF
Sbjct: 1    MDGDDETSGPMIDEIYANGGGDDGDKRSRR--AIMSGDQVDIEAYAALYSGRTKIMRLLF 58

Query: 264  IADRCGNESLQLEALRMAYDEIRKSENTCLHREVAQKIAGRLGPDYLLDQAWADAVDRRA 443
            IAD+  N + QLEALRMAYDEI+K ENT L REV QKI GRLGP+Y +D AW DA+DRRA
Sbjct: 59   IADKMNNAASQLEALRMAYDEIKKGENTQLFREVVQKIDGRLGPNYGMDAAWCDAIDRRA 118

Query: 444  XXXXXXXXXXXXGYRTNLIKESIRMGYNDFGDFYYSHGQLGDAFKSYVRTRDYCTTSKHI 623
                         YRTNLIKESIRMGYNDFG+FYY+HGQLGDAFKSYVRTRDYCTTSKHI
Sbjct: 119  EQKKEKLENELNAYRTNLIKESIRMGYNDFGEFYYAHGQLGDAFKSYVRTRDYCTTSKHI 178

Query: 624  TQMCLNVILVSIELGQFMHVSNYVSKAEQTPDSQDPVTVAKLKCALGLAFLETKKYKLAA 803
              MC++ ILVSIE+GQF HV++YVSKAEQ+PD+ + VTVAKL+CA GLA LE KKYKLAA
Sbjct: 179  VHMCMSAILVSIEMGQFPHVTSYVSKAEQSPDALEAVTVAKLRCAAGLANLEAKKYKLAA 238

Query: 804  RKFLETGPELANNYTEVIAPQDVGTYGGLCALASFDRTELKNKVIDNINFRNFLELVPEI 983
            RKFLETGPEL ++Y +VIAPQDV TYGGLCALA+FDR ELK+KVIDN NFRNFLELVPE+
Sbjct: 239  RKFLETGPELGSHYNDVIAPQDVATYGGLCALATFDRAELKSKVIDNSNFRNFLELVPEV 298

Query: 984  RELIHDFYASHYASCLGYLESLKHNLMLDIHLYDHVEILYTQIRHKAIIQYTHPFISVNL 1163
            RELI+DFY+SHYASCL YL +LK NL+LDIHL+DHVE LY QIRHKA+IQYT PF+SV+L
Sbjct: 299  RELINDFYSSHYASCLEYLGNLKANLLLDIHLHDHVETLYDQIRHKALIQYTLPFVSVDL 358

Query: 1164 LTMADAFKTTVTGLEKELEALITENQIQARIDSHNKILYARHADQRNATFQRVLQTGEEF 1343
              MA+AFKTTV GLEKELEALIT+NQIQARIDSHNKILYARHADQRNATFQRVL+TG EF
Sbjct: 359  NMMANAFKTTVAGLEKELEALITDNQIQARIDSHNKILYARHADQRNATFQRVLETGREF 418

Query: 1344 NRDAKAMLLRANLLKHEQNL 1403
            +RD ++MLLR+NL+KHE NL
Sbjct: 419  DRDVRSMLLRSNLIKHEFNL 438


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