BLASTX nr result

ID: Dioscorea21_contig00000341 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00000341
         (594 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002277159.1| PREDICTED: elongation factor 1-alpha [Vitis ...   386   e-105
dbj|BAM13874.1| elongation factor 1 alpha [Symplocarpus renifolius]   384   e-105
ref|XP_002316351.1| predicted protein [Populus trichocarpa] gi|2...   384   e-105
ref|XP_002326338.1| predicted protein [Populus trichocarpa] gi|1...   384   e-105
gb|AAD56020.1|AF181492_1 elongation factor-1 alpha 3 [Lilium lon...   383   e-104

>ref|XP_002277159.1| PREDICTED: elongation factor 1-alpha [Vitis vinifera]
           gi|147766775|emb|CAN76417.1| hypothetical protein
           VITISV_018410 [Vitis vinifera]
           gi|147767149|emb|CAN69000.1| hypothetical protein
           VITISV_022484 [Vitis vinifera]
          Length = 447

 Score =  386 bits (992), Expect = e-105
 Identities = 191/197 (96%), Positives = 195/197 (98%)
 Frame = +3

Query: 3   VYKIGGIGTVPVGRVETGMLKPGMVVTFGPTGLTTEVKSVEMHHESLVEALPGDNVGFNV 182
           VYKIGGIGTVPVGRVETG+LKPGMVVTFGPTGLTTEVKSVEMHHESLVEALPGDNVGFNV
Sbjct: 241 VYKIGGIGTVPVGRVETGILKPGMVVTFGPTGLTTEVKSVEMHHESLVEALPGDNVGFNV 300

Query: 183 KNVAVKDLKRGFVASNSKEDPAKEAANFTSQVIIMNHPGQIGNGYAPVLDCHTCHIAVKF 362
           KNVAVKDLKRGFVASNSK+DPAKEAANF SQVIIMNHPGQIGNGYAPVLDCHT HIAVKF
Sbjct: 301 KNVAVKDLKRGFVASNSKDDPAKEAANFISQVIIMNHPGQIGNGYAPVLDCHTSHIAVKF 360

Query: 363 AEILTKIDRRSGKELEKEPKFLKNGDAGLVKMVPTKPMVVETFSEYPPLGRFAVRDMRQT 542
           AEI+TKIDRRSGKELEKEPKFLKNGDAGLVKM+PTKPMVVETFSEYPPLGRFAVRDMRQT
Sbjct: 361 AEIMTKIDRRSGKELEKEPKFLKNGDAGLVKMIPTKPMVVETFSEYPPLGRFAVRDMRQT 420

Query: 543 VAVGVIKNVEKKDPSGA 593
           VAVGVIKNVEKKDPSGA
Sbjct: 421 VAVGVIKNVEKKDPSGA 437


>dbj|BAM13874.1| elongation factor 1 alpha [Symplocarpus renifolius]
          Length = 447

 Score =  384 bits (986), Expect = e-105
 Identities = 187/197 (94%), Positives = 194/197 (98%)
 Frame = +3

Query: 3   VYKIGGIGTVPVGRVETGMLKPGMVVTFGPTGLTTEVKSVEMHHESLVEALPGDNVGFNV 182
           VYKIGGIGTVPVGRVETG +KPGM+VTFGPTGLTTEVKSVEMHHE+L EA PGDNVGFNV
Sbjct: 241 VYKIGGIGTVPVGRVETGFIKPGMIVTFGPTGLTTEVKSVEMHHETLQEAFPGDNVGFNV 300

Query: 183 KNVAVKDLKRGFVASNSKEDPAKEAANFTSQVIIMNHPGQIGNGYAPVLDCHTCHIAVKF 362
           KNVAVKDLKRGFVASNSK+DPAKEAANFTSQVIIMNHPGQIGNGYAPVLDCHTCHIAVKF
Sbjct: 301 KNVAVKDLKRGFVASNSKDDPAKEAANFTSQVIIMNHPGQIGNGYAPVLDCHTCHIAVKF 360

Query: 363 AEILTKIDRRSGKELEKEPKFLKNGDAGLVKMVPTKPMVVETFSEYPPLGRFAVRDMRQT 542
           AEILTKIDRRSGKELEKEPKFLKNGDAG+VKM+PTKPMVVETFSEYPPLGRFAVRDMRQT
Sbjct: 361 AEILTKIDRRSGKELEKEPKFLKNGDAGMVKMIPTKPMVVETFSEYPPLGRFAVRDMRQT 420

Query: 543 VAVGVIKNVEKKDPSGA 593
           VAVGVIK+VEKKDPSGA
Sbjct: 421 VAVGVIKSVEKKDPSGA 437


>ref|XP_002316351.1| predicted protein [Populus trichocarpa] gi|222865391|gb|EEF02522.1|
           predicted protein [Populus trichocarpa]
          Length = 449

 Score =  384 bits (986), Expect = e-105
 Identities = 186/197 (94%), Positives = 196/197 (99%)
 Frame = +3

Query: 3   VYKIGGIGTVPVGRVETGMLKPGMVVTFGPTGLTTEVKSVEMHHESLVEALPGDNVGFNV 182
           VYKIGGIGTVPVGRVETG++KPGMVVTFGPTGL+TEVKSVEMHHE+L+EALPGDNVGFNV
Sbjct: 241 VYKIGGIGTVPVGRVETGVIKPGMVVTFGPTGLSTEVKSVEMHHEALLEALPGDNVGFNV 300

Query: 183 KNVAVKDLKRGFVASNSKEDPAKEAANFTSQVIIMNHPGQIGNGYAPVLDCHTCHIAVKF 362
           KNVAVKDLKRGFVASNSK+DPA+EAANFTSQVIIMNHPGQIGNGYAPVLDCHTCHIAVKF
Sbjct: 301 KNVAVKDLKRGFVASNSKDDPAREAANFTSQVIIMNHPGQIGNGYAPVLDCHTCHIAVKF 360

Query: 363 AEILTKIDRRSGKELEKEPKFLKNGDAGLVKMVPTKPMVVETFSEYPPLGRFAVRDMRQT 542
           AEILTKIDRRSGKELEKEPKFLKNGDAG++KM+PTKPMVVETFS YPPLGRFAVRDMRQT
Sbjct: 361 AEILTKIDRRSGKELEKEPKFLKNGDAGMIKMIPTKPMVVETFSAYPPLGRFAVRDMRQT 420

Query: 543 VAVGVIKNVEKKDPSGA 593
           VAVGVIKNVEKKDPSGA
Sbjct: 421 VAVGVIKNVEKKDPSGA 437


>ref|XP_002326338.1| predicted protein [Populus trichocarpa] gi|118487793|gb|ABK95720.1|
           unknown [Populus trichocarpa]
           gi|222833531|gb|EEE72008.1| predicted protein [Populus
           trichocarpa]
          Length = 447

 Score =  384 bits (986), Expect = e-105
 Identities = 189/197 (95%), Positives = 194/197 (98%)
 Frame = +3

Query: 3   VYKIGGIGTVPVGRVETGMLKPGMVVTFGPTGLTTEVKSVEMHHESLVEALPGDNVGFNV 182
           VYKIGGIGTVPVGRVETG+LKPGMVVTFGPTGLTTEVKSVEMHHE+L EALPGDNVGFNV
Sbjct: 241 VYKIGGIGTVPVGRVETGVLKPGMVVTFGPTGLTTEVKSVEMHHEALQEALPGDNVGFNV 300

Query: 183 KNVAVKDLKRGFVASNSKEDPAKEAANFTSQVIIMNHPGQIGNGYAPVLDCHTCHIAVKF 362
           KNVAVKDLKRGFVASNSK+DPAKEAANFTSQVIIMNHPGQIGNGYAPVLDCHTCHIAVKF
Sbjct: 301 KNVAVKDLKRGFVASNSKDDPAKEAANFTSQVIIMNHPGQIGNGYAPVLDCHTCHIAVKF 360

Query: 363 AEILTKIDRRSGKELEKEPKFLKNGDAGLVKMVPTKPMVVETFSEYPPLGRFAVRDMRQT 542
           AEILTKIDRRSGKELEKEPKFLKNGDAG VKM+PTKPMVVETFS YPPLGRFAVRDMRQT
Sbjct: 361 AEILTKIDRRSGKELEKEPKFLKNGDAGFVKMIPTKPMVVETFSAYPPLGRFAVRDMRQT 420

Query: 543 VAVGVIKNVEKKDPSGA 593
           VAVGVIK+VEKKDPSGA
Sbjct: 421 VAVGVIKSVEKKDPSGA 437


>gb|AAD56020.1|AF181492_1 elongation factor-1 alpha 3 [Lilium longiflorum]
          Length = 447

 Score =  383 bits (984), Expect = e-104
 Identities = 187/197 (94%), Positives = 196/197 (99%)
 Frame = +3

Query: 3   VYKIGGIGTVPVGRVETGMLKPGMVVTFGPTGLTTEVKSVEMHHESLVEALPGDNVGFNV 182
           VYKIGGIGTVPVGRVETG++KPGMVVTFGPTGLTTEVKSVEMHHE+L+EALPGDNVGFNV
Sbjct: 241 VYKIGGIGTVPVGRVETGVIKPGMVVTFGPTGLTTEVKSVEMHHEALLEALPGDNVGFNV 300

Query: 183 KNVAVKDLKRGFVASNSKEDPAKEAANFTSQVIIMNHPGQIGNGYAPVLDCHTCHIAVKF 362
           KNVAVKDLKRGFVASNSK+DPAKEAANFTSQVIIMNHPGQIGNGYAPVLDCHT HIAVKF
Sbjct: 301 KNVAVKDLKRGFVASNSKDDPAKEAANFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKF 360

Query: 363 AEILTKIDRRSGKELEKEPKFLKNGDAGLVKMVPTKPMVVETFSEYPPLGRFAVRDMRQT 542
           AEILTKIDRRSGKELEKEPKFLKNGDAG+VKM+PTKPMVVETF+EYPPLGRFAVRDMRQT
Sbjct: 361 AEILTKIDRRSGKELEKEPKFLKNGDAGMVKMIPTKPMVVETFAEYPPLGRFAVRDMRQT 420

Query: 543 VAVGVIKNVEKKDPSGA 593
           VAVGVIKNVEKKDP+GA
Sbjct: 421 VAVGVIKNVEKKDPTGA 437


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