BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00000324
         (1163 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI32742.3| unnamed protein product [Vitis vinifera]              105   9e-34
ref|XP_002519525.1| ribonucleoprotein, chloroplast, putative [Ri...   132   1e-28
ref|XP_004137828.1| PREDICTED: 29 kDa ribonucleoprotein, chlorop...   130   5e-28
ref|XP_003562626.1| PREDICTED: 29 kDa ribonucleoprotein, chlorop...   130   5e-28
gb|AAA79045.1| 24 kDa RNA binding protein, partial [Spinacia ole...   130   6e-28

>emb|CBI32742.3| unnamed protein product [Vitis vinifera]
          Length = 127

 Score =  105 bits (261), Expect(2) = 9e-34
 Identities = 50/69 (72%), Positives = 63/69 (91%)
 Frame = -1

Query: 551 LETLFSEQGKVMDARVVYCRESGRSRGFGFVTYSTAEEVDNAISALNGFDLDGRNIRVTV 372
           LETLFSEQGKV +ARV+Y RE+GRSRGFGFVTY++AEEV+ AI +L+G DL+GR+IRVT+
Sbjct: 59  LETLFSEQGKVTEARVIYDRETGRSRGFGFVTYNSAEEVNRAIESLDGVDLNGRSIRVTM 118

Query: 371 AEDKPKRQF 345
           AE +P+RQF
Sbjct: 119 AEARPRRQF 127



 Score = 66.2 bits (160), Expect(2) = 9e-34
 Identities = 31/39 (79%), Positives = 36/39 (92%)
 Frame = -3

Query: 771 MVEVIYDKLTGKSRGFGFVTMSSVGEVKAAEKQLNGYEL 655
           MVEVIYDK+TG+SRGFGFVTMS+V EV+AA +Q NGYEL
Sbjct: 1   MVEVIYDKITGRSRGFGFVTMSTVEEVEAAAQQFNGYEL 39



 Score = 57.0 bits (136), Expect = 9e-06
 Identities = 26/53 (49%), Positives = 36/53 (67%)
 Frame = -1

Query: 506 VVYCRESGRSRGFGFVTYSTAEEVDNAISALNGFDLDGRNIRVTVAEDKPKRQ 348
           V+Y + +GRSRGFGFVT ST EEV+ A    NG++L+GR +RV       +R+
Sbjct: 4   VIYDKITGRSRGFGFVTMSTVEEVEAAAQQFNGYELEGRQLRVNSGPPPARRE 56


>ref|XP_002519525.1| ribonucleoprotein, chloroplast, putative [Ricinus communis]
            gi|223541388|gb|EEF42939.1| ribonucleoprotein,
            chloroplast, putative [Ricinus communis]
          Length = 280

 Score =  132 bits (333), Expect = 1e-28
 Identities = 74/134 (55%), Positives = 98/134 (73%)
 Frame = -3

Query: 1056 TISSRASALPLFSLVSSRPIKALPLVLQCPKTRHIPIPRVTLSSDFEEKLDEDADEQGGE 877
            ++S +  A P+ S+ SS     +PL  Q   +    +P V +SS+F ++ D  +D   G+
Sbjct: 29   SLSFKLHAKPI-SIPSSLFSSFVPLQQQPYSSSSRFVPSVAISSEFGQEEDVSSD---GD 84

Query: 876  VASFSPELKLFVGNLPFTVDSSELAGLFESVGSVEMVEVIYDKLTGKSRGFGFVTMSSVG 697
             +SFS +LKLFVGNLPF VDS++LAGLFES G+VEMVEVIYDK+TG+SRGFGFVTMSS+ 
Sbjct: 85   ESSFSQDLKLFVGNLPFNVDSAQLAGLFESAGNVEMVEVIYDKVTGRSRGFGFVTMSSID 144

Query: 696  EVKAAEKQLNGYEL 655
            EV+AA +Q NGYEL
Sbjct: 145  EVEAAAQQFNGYEL 158



 Score =  108 bits (271), Expect = 2e-21
 Identities = 53/69 (76%), Positives = 63/69 (91%)
 Frame = -1

Query: 551 LETLFSEQGKVMDARVVYCRESGRSRGFGFVTYSTAEEVDNAISALNGFDLDGRNIRVTV 372
           LE+ FSEQGKV+DA+VVY RESGRSRGFGFVTYS+AEEV+NAI +LNG +LDGR IRV+V
Sbjct: 212 LESFFSEQGKVVDAKVVYDRESGRSRGFGFVTYSSAEEVENAIDSLNGAELDGRAIRVSV 271

Query: 371 AEDKPKRQF 345
           AE +P+RQF
Sbjct: 272 AEARPRRQF 280



 Score = 65.1 bits (157), Expect = 3e-08
 Identities = 33/66 (50%), Positives = 44/66 (66%)
 Frame = -3

Query: 852 KLFVGNLPFTVDSSELAGLFESVGSVEMVEVIYDKLTGKSRGFGFVTMSSVGEVKAAEKQ 673
           +L+VGNL ++VD+  L   F   G V   +V+YD+ +G+SRGFGFVT SS  EV+ A   
Sbjct: 197 RLYVGNLSWSVDNLALESFFSEQGKVVDAKVVYDRESGRSRGFGFVTYSSAEEVENAIDS 256

Query: 672 LNGYEL 655
           LNG EL
Sbjct: 257 LNGAEL 262



 Score = 58.2 bits (139), Expect = 4e-06
 Identities = 28/58 (48%), Positives = 38/58 (65%)
 Frame = -1

Query: 551 LETLFSEQGKVMDARVVYCRESGRSRGFGFVTYSTAEEVDNAISALNGFDLDGRNIRV 378
           L  LF   G V    V+Y + +GRSRGFGFVT S+ +EV+ A    NG++L+GR +RV
Sbjct: 108 LAGLFESAGNVEMVEVIYDKVTGRSRGFGFVTMSSIDEVEAAAQQFNGYELEGRALRV 165


>ref|XP_004137828.1| PREDICTED: 29 kDa ribonucleoprotein, chloroplastic-like [Cucumis
            sativus] gi|449483348|ref|XP_004156563.1| PREDICTED: 29
            kDa ribonucleoprotein, chloroplastic-like [Cucumis
            sativus]
          Length = 278

 Score =  130 bits (328), Expect = 5e-28
 Identities = 78/145 (53%), Positives = 98/145 (67%), Gaps = 11/145 (7%)
 Frame = -3

Query: 1056 TISSRASALPLFSLVSSRPIKAL--PLVLQC---PKTRHIP------IPRVTLSSDFEEK 910
            T+SS      LFSL  S  I+ L  P+ +     P  R  P      +  V +SSD+ + 
Sbjct: 17   TLSSSNPKFKLFSLNPSSSIRLLSNPISISSFLLPSHRVSPPFSSRFVRNVAVSSDYGQ- 75

Query: 909  LDEDADEQGGEVASFSPELKLFVGNLPFTVDSSELAGLFESVGSVEMVEVIYDKLTGKSR 730
             +E   E  G+ +S++P+LKLFVGNLPFTVDS++LAGLFES G VE VEVIYDK TG+SR
Sbjct: 76   -EEGTLEVDGDDSSYAPDLKLFVGNLPFTVDSAQLAGLFESAGQVERVEVIYDKTTGRSR 134

Query: 729  GFGFVTMSSVGEVKAAEKQLNGYEL 655
            GFGFVTMS+VGEV+AA +Q NGYEL
Sbjct: 135  GFGFVTMSTVGEVEAAAQQFNGYEL 159



 Score = 92.0 bits (227), Expect = 2e-16
 Identities = 46/70 (65%), Positives = 59/70 (84%), Gaps = 1/70 (1%)
 Frame = -1

Query: 551 LETLFSEQGKVMDARVVYCRESGRSRGFGFVTYSTAEEVDNAISALNGFDLDGRNIRVTV 372
           LE LF E+G V++A+VVY R+SG+SRGFGFVTY++AEEV+ AI +L+G DLDGR IRVT 
Sbjct: 209 LENLFREKGNVLEAKVVYDRDSGKSRGFGFVTYNSAEEVNEAIQSLDGVDLDGRPIRVTQ 268

Query: 371 AEDK-PKRQF 345
           AE + P+RQF
Sbjct: 269 AEARPPRRQF 278



 Score = 65.9 bits (159), Expect = 2e-08
 Identities = 33/67 (49%), Positives = 41/67 (61%)
 Frame = -1

Query: 551 LETLFSEQGKVMDARVVYCRESGRSRGFGFVTYSTAEEVDNAISALNGFDLDGRNIRVTV 372
           L  LF   G+V    V+Y + +GRSRGFGFVT ST  EV+ A    NG++LDGR +RV  
Sbjct: 109 LAGLFESAGQVERVEVIYDKTTGRSRGFGFVTMSTVGEVEAAAQQFNGYELDGRLLRVNY 168

Query: 371 AEDKPKR 351
               PKR
Sbjct: 169 GPPPPKR 175



 Score = 60.8 bits (146), Expect = 6e-07
 Identities = 35/84 (41%), Positives = 50/84 (59%), Gaps = 1/84 (1%)
 Frame = -3

Query: 903 EDADEQGGEVAS-FSPELKLFVGNLPFTVDSSELAGLFESVGSVEMVEVIYDKLTGKSRG 727
           +D+  +G   AS F    ++ V NL + VD   L  LF   G+V   +V+YD+ +GKSRG
Sbjct: 176 DDSSFRGSRNASRFDNRNRVHVSNLAWGVDDLTLENLFREKGNVLEAKVVYDRDSGKSRG 235

Query: 726 FGFVTMSSVGEVKAAEKQLNGYEL 655
           FGFVT +S  EV  A + L+G +L
Sbjct: 236 FGFVTYNSAEEVNEAIQSLDGVDL 259


>ref|XP_003562626.1| PREDICTED: 29 kDa ribonucleoprotein, chloroplastic-like [Brachypodium
            distachyon]
          Length = 275

 Score =  130 bits (328), Expect = 5e-28
 Identities = 68/115 (59%), Positives = 86/115 (74%), Gaps = 1/115 (0%)
 Frame = -3

Query: 1002 PIKALPLVLQCPKTRHIPIPRVTLSSDFEEKLDEDADEQGGEV-ASFSPELKLFVGNLPF 826
            P++A   +L  P+ R I    V +SS+FE +  E  +E GGE  A +S +LKLFVGNLPF
Sbjct: 34   PVRAASALLALPRRRLILPVAVAVSSEFETEDAEGQEEAGGESEAEYSEDLKLFVGNLPF 93

Query: 825  TVDSSELAGLFESVGSVEMVEVIYDKLTGKSRGFGFVTMSSVGEVKAAEKQLNGY 661
            TVDS++LAGLFE  GSVEMVEV+YD++TG+SRGFGFVTMS+  EV AA +Q NGY
Sbjct: 94   TVDSAQLAGLFEQAGSVEMVEVVYDRMTGRSRGFGFVTMSTAEEVSAAVEQFNGY 148



 Score =  104 bits (259), Expect = 5e-20
 Identities = 50/66 (75%), Positives = 59/66 (89%)
 Frame = -1

Query: 551 LETLFSEQGKVMDARVVYCRESGRSRGFGFVTYSTAEEVDNAISALNGFDLDGRNIRVTV 372
           LE LFSEQGKV+DA+V+Y R+SGRSRGFGFVTY +A+EV+NAIS L+G DLDGR IRVTV
Sbjct: 205 LENLFSEQGKVLDAKVIYDRDSGRSRGFGFVTYGSADEVNNAISNLDGVDLDGRQIRVTV 264

Query: 371 AEDKPK 354
           AE KP+
Sbjct: 265 AESKPR 270



 Score = 68.9 bits (167), Expect = 2e-09
 Identities = 38/77 (49%), Positives = 47/77 (61%)
 Frame = -3

Query: 885 GGEVASFSPELKLFVGNLPFTVDSSELAGLFESVGSVEMVEVIYDKLTGKSRGFGFVTMS 706
           GG   SF    KL+VGNL + VD+S L  LF   G V   +VIYD+ +G+SRGFGFVT  
Sbjct: 179 GGGGGSFDSGNKLYVGNLSWGVDNSTLENLFSEQGKVLDAKVIYDRDSGRSRGFGFVTYG 238

Query: 705 SVGEVKAAEKQLNGYEL 655
           S  EV  A   L+G +L
Sbjct: 239 SADEVNNAISNLDGVDL 255



 Score = 66.2 bits (160), Expect = 1e-08
 Identities = 34/69 (49%), Positives = 41/69 (59%)
 Frame = -1

Query: 551 LETLFSEQGKVMDARVVYCRESGRSRGFGFVTYSTAEEVDNAISALNGFDLDGRNIRVTV 372
           L  LF + G V    VVY R +GRSRGFGFVT STAEEV  A+   NG+   GR +RV  
Sbjct: 100 LAGLFEQAGSVEMVEVVYDRMTGRSRGFGFVTMSTAEEVSAAVEQFNGYTFQGRPLRVNS 159

Query: 371 AEDKPKRQF 345
               P+ +F
Sbjct: 160 GPPPPRDEF 168


>gb|AAA79045.1| 24 kDa RNA binding protein, partial [Spinacia oleracea]
          Length = 220

 Score =  130 bits (327), Expect = 6e-28
 Identities = 64/98 (65%), Positives = 79/98 (80%)
 Frame = -3

Query: 948 IPRVTLSSDFEEKLDEDADEQGGEVASFSPELKLFVGNLPFTVDSSELAGLFESVGSVEM 769
           +  V +SS+FE++ D   D+  G   +FSP+LK+FVGNLPF VDS+ELAGLF + G+VEM
Sbjct: 7   VRHVRISSEFEQEEDVMGDDDAGRQPNFSPDLKIFVGNLPFNVDSAELAGLFGAAGTVEM 66

Query: 768 VEVIYDKLTGKSRGFGFVTMSSVGEVKAAEKQLNGYEL 655
           VEVIYDKLTG+SRGFGFVTMSSV EV+AA +Q N YEL
Sbjct: 67  VEVIYDKLTGRSRGFGFVTMSSVEEVEAAAQQFNNYEL 104



 Score = 87.8 bits (216), Expect = 5e-15
 Identities = 41/67 (61%), Positives = 57/67 (85%)
 Frame = -1

Query: 551 LETLFSEQGKVMDARVVYCRESGRSRGFGFVTYSTAEEVDNAISALNGFDLDGRNIRVTV 372
           L+TLFSE G V++A+V+Y R++GRSRGFGFVTY++A EV+ AI +L+G DL+GR+IRVT 
Sbjct: 151 LKTLFSETGDVVEAKVIYDRDTGRSRGFGFVTYNSANEVNTAIESLDGVDLNGRSIRVTA 210

Query: 371 AEDKPKR 351
           AE + +R
Sbjct: 211 AEARQRR 217



 Score = 66.6 bits (161), Expect = 1e-08
 Identities = 35/75 (46%), Positives = 45/75 (60%)
 Frame = -3

Query: 879 EVASFSPELKLFVGNLPFTVDSSELAGLFESVGSVEMVEVIYDKLTGKSRGFGFVTMSSV 700
           E  SF    ++ VGNL + VD   L  LF   G V   +VIYD+ TG+SRGFGFVT +S 
Sbjct: 127 ECDSFGSSNRVHVGNLSWKVDDDALKTLFSETGDVVEAKVIYDRDTGRSRGFGFVTYNSA 186

Query: 699 GEVKAAEKQLNGYEL 655
            EV  A + L+G +L
Sbjct: 187 NEVNTAIESLDGVDL 201



 Score = 60.8 bits (146), Expect = 6e-07
 Identities = 33/66 (50%), Positives = 41/66 (62%)
 Frame = -1

Query: 551 LETLFSEQGKVMDARVVYCRESGRSRGFGFVTYSTAEEVDNAISALNGFDLDGRNIRVTV 372
           L  LF   G V    V+Y + +GRSRGFGFVT S+ EEV+ A    N ++LDGR +RVT 
Sbjct: 54  LAGLFGAAGTVEMVEVIYDKLTGRSRGFGFVTMSSVEEVEAAAQQFNNYELDGRTLRVT- 112

Query: 371 AEDKPK 354
            ED  K
Sbjct: 113 -EDSHK 117