BLASTX nr result

ID: Dioscorea21_contig00000290 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00000290
         (956 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002509801.1| tubulin beta chain, putative [Ricinus commun...   614   e-173
ref|XP_002273514.1| PREDICTED: tubulin beta-1 chain [Vitis vinif...   613   e-173
ref|XP_002304492.1| tubulin, beta chain [Populus trichocarpa] gi...   612   e-173
gb|AAN32988.1| beta-tubulin 1 [Gossypium hirsutum]                    612   e-173
ref|XP_003525399.1| PREDICTED: tubulin beta-1 chain-like [Glycin...   610   e-172

>ref|XP_002509801.1| tubulin beta chain, putative [Ricinus communis]
           gi|223549700|gb|EEF51188.1| tubulin beta chain, putative
           [Ricinus communis]
          Length = 445

 Score =  614 bits (1583), Expect = e-173
 Identities = 297/318 (93%), Positives = 302/318 (94%)
 Frame = -1

Query: 956 AGQCGNQIGGKFWEVVCDEHGIDATGNYVGSSSLQLERVNVYYNEASGGRYVPRAVLMDL 777
           AGQCGNQIGGKFWEVVCDEHGID TGNYVG+S +QLERVNVYYNEASGGRYVPRAVLMDL
Sbjct: 9   AGQCGNQIGGKFWEVVCDEHGIDPTGNYVGNSHVQLERVNVYYNEASGGRYVPRAVLMDL 68

Query: 776 EPGTMDALRTGPYGQIFRPDNFVFGQNGAGNNWAKGHYTEGAELIDAVLDVVRKEAENCD 597
           EPGTMD+LRTGPYG+IFRPDNFVFGQNGAGNNWAKGHYTEGAELID+VLDVVRKEAENCD
Sbjct: 69  EPGTMDSLRTGPYGKIFRPDNFVFGQNGAGNNWAKGHYTEGAELIDSVLDVVRKEAENCD 128

Query: 596 CLQGFQICHXXXXXXXXXXXXXLISKIREEYPDRMMLTFSVFPSPKVSDTVVEPYNATLS 417
           CLQGFQICH             LISKIREEYPDRMMLTFSVFPSPKVSDTVVEPYNATLS
Sbjct: 129 CLQGFQICHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDTVVEPYNATLS 188

Query: 416 VHQLVENADECMVLDNEALYDICFRTLKLTNPSFGDLNHLISTTMSGVTCCLRFPGQLNS 237
           VHQLVENADECMVLDNEALYDICFRTLKLTNPSFGDLNHLISTTMSGVTCCLRFPGQLNS
Sbjct: 189 VHQLVENADECMVLDNEALYDICFRTLKLTNPSFGDLNHLISTTMSGVTCCLRFPGQLNS 248

Query: 236 DLRKLAVNLIPFPRLHFFMVGFTPLTSRGSQQYRALTIPELTQQMWDAKNMMCAADPRHG 57
           DLRKLAVNLIPFPRLHFFMVGF PLTSRGSQQYRALTIPELTQQMWDAKNMMCAADPRHG
Sbjct: 249 DLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQQYRALTIPELTQQMWDAKNMMCAADPRHG 308

Query: 56  RYLTASAMFRGKMSTKEV 3
           RYLTASAMFRGKMSTKEV
Sbjct: 309 RYLTASAMFRGKMSTKEV 326


>ref|XP_002273514.1| PREDICTED: tubulin beta-1 chain [Vitis vinifera]
          Length = 444

 Score =  613 bits (1580), Expect = e-173
 Identities = 297/318 (93%), Positives = 300/318 (94%)
 Frame = -1

Query: 956 AGQCGNQIGGKFWEVVCDEHGIDATGNYVGSSSLQLERVNVYYNEASGGRYVPRAVLMDL 777
           AGQCGNQIGGKFWEVVCDEHGID  GNYVG S LQLERVNVYYNEASGGRYVPRAVLMDL
Sbjct: 9   AGQCGNQIGGKFWEVVCDEHGIDTKGNYVGDSHLQLERVNVYYNEASGGRYVPRAVLMDL 68

Query: 776 EPGTMDALRTGPYGQIFRPDNFVFGQNGAGNNWAKGHYTEGAELIDAVLDVVRKEAENCD 597
           EPGTMD+LRTGPYG+IFRPDNFVFGQNGAGNNWAKGHYTEGAELID+VLDVVRKEAENCD
Sbjct: 69  EPGTMDSLRTGPYGKIFRPDNFVFGQNGAGNNWAKGHYTEGAELIDSVLDVVRKEAENCD 128

Query: 596 CLQGFQICHXXXXXXXXXXXXXLISKIREEYPDRMMLTFSVFPSPKVSDTVVEPYNATLS 417
           CLQGFQICH             LISKIREEYPDRMMLTFSVFPSPKVSDTVVEPYNATLS
Sbjct: 129 CLQGFQICHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDTVVEPYNATLS 188

Query: 416 VHQLVENADECMVLDNEALYDICFRTLKLTNPSFGDLNHLISTTMSGVTCCLRFPGQLNS 237
           VHQLVENADECMVLDNEALYDICFRTLKLTNPSFGDLNHLISTTMSGVTCCLRFPGQLNS
Sbjct: 189 VHQLVENADECMVLDNEALYDICFRTLKLTNPSFGDLNHLISTTMSGVTCCLRFPGQLNS 248

Query: 236 DLRKLAVNLIPFPRLHFFMVGFTPLTSRGSQQYRALTIPELTQQMWDAKNMMCAADPRHG 57
           DLRKLAVNLIPFPRLHFFMVGF PLTSRGSQQYRALTIPELTQQMWDAKNMMCAADPRHG
Sbjct: 249 DLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQQYRALTIPELTQQMWDAKNMMCAADPRHG 308

Query: 56  RYLTASAMFRGKMSTKEV 3
           RYLTASAMFRGKMSTKEV
Sbjct: 309 RYLTASAMFRGKMSTKEV 326


>ref|XP_002304492.1| tubulin, beta chain [Populus trichocarpa]
           gi|222841924|gb|EEE79471.1| tubulin, beta chain [Populus
           trichocarpa]
          Length = 444

 Score =  612 bits (1579), Expect = e-173
 Identities = 296/318 (93%), Positives = 301/318 (94%)
 Frame = -1

Query: 956 AGQCGNQIGGKFWEVVCDEHGIDATGNYVGSSSLQLERVNVYYNEASGGRYVPRAVLMDL 777
           AGQCGNQIGGKFWEVVCDEHGID TGNY G+S +QLERVNVYYNEASGGRYVPRAVLMDL
Sbjct: 9   AGQCGNQIGGKFWEVVCDEHGIDPTGNYTGNSHVQLERVNVYYNEASGGRYVPRAVLMDL 68

Query: 776 EPGTMDALRTGPYGQIFRPDNFVFGQNGAGNNWAKGHYTEGAELIDAVLDVVRKEAENCD 597
           EPGTMD+LRTGPYG+IFRPDNFVFGQNGAGNNWAKGHYTEGAELID+VLDVVRKEAENCD
Sbjct: 69  EPGTMDSLRTGPYGKIFRPDNFVFGQNGAGNNWAKGHYTEGAELIDSVLDVVRKEAENCD 128

Query: 596 CLQGFQICHXXXXXXXXXXXXXLISKIREEYPDRMMLTFSVFPSPKVSDTVVEPYNATLS 417
           CLQGFQICH             LISKIREEYPDRMMLTFSVFPSPKVSDTVVEPYNATLS
Sbjct: 129 CLQGFQICHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDTVVEPYNATLS 188

Query: 416 VHQLVENADECMVLDNEALYDICFRTLKLTNPSFGDLNHLISTTMSGVTCCLRFPGQLNS 237
           VHQLVENADECMVLDNEALYDICFRTLKLTNPSFGDLNHLISTTMSGVTCCLRFPGQLNS
Sbjct: 189 VHQLVENADECMVLDNEALYDICFRTLKLTNPSFGDLNHLISTTMSGVTCCLRFPGQLNS 248

Query: 236 DLRKLAVNLIPFPRLHFFMVGFTPLTSRGSQQYRALTIPELTQQMWDAKNMMCAADPRHG 57
           DLRKLAVNLIPFPRLHFFMVGF PLTSRGSQQYRALTIPELTQQMWDAKNMMCAADPRHG
Sbjct: 249 DLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQQYRALTIPELTQQMWDAKNMMCAADPRHG 308

Query: 56  RYLTASAMFRGKMSTKEV 3
           RYLTASAMFRGKMSTKEV
Sbjct: 309 RYLTASAMFRGKMSTKEV 326


>gb|AAN32988.1| beta-tubulin 1 [Gossypium hirsutum]
          Length = 444

 Score =  612 bits (1579), Expect = e-173
 Identities = 294/318 (92%), Positives = 303/318 (95%)
 Frame = -1

Query: 956 AGQCGNQIGGKFWEVVCDEHGIDATGNYVGSSSLQLERVNVYYNEASGGRYVPRAVLMDL 777
           AGQCGNQIGGKFWEVVCDEHGIDATGNYVG+S +QLER+NVYYNEASGGRYVPRAVLMDL
Sbjct: 9   AGQCGNQIGGKFWEVVCDEHGIDATGNYVGTSPVQLERLNVYYNEASGGRYVPRAVLMDL 68

Query: 776 EPGTMDALRTGPYGQIFRPDNFVFGQNGAGNNWAKGHYTEGAELIDAVLDVVRKEAENCD 597
           EPGTMD+LRTGPYG++FRPDNFVFGQNGAGNNWAKGHYTEGAELID+VLDVVRKEAENCD
Sbjct: 69  EPGTMDSLRTGPYGKLFRPDNFVFGQNGAGNNWAKGHYTEGAELIDSVLDVVRKEAENCD 128

Query: 596 CLQGFQICHXXXXXXXXXXXXXLISKIREEYPDRMMLTFSVFPSPKVSDTVVEPYNATLS 417
           CLQGFQ+CH             LISKIREEYPDRMMLTFSVFPSPKVSDTVVEPYNATLS
Sbjct: 129 CLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDTVVEPYNATLS 188

Query: 416 VHQLVENADECMVLDNEALYDICFRTLKLTNPSFGDLNHLISTTMSGVTCCLRFPGQLNS 237
           VHQLVENADECMVLDNEALYDICFRTLKLTNPSFGDLNHLISTTMSGVTCCLRFPGQLNS
Sbjct: 189 VHQLVENADECMVLDNEALYDICFRTLKLTNPSFGDLNHLISTTMSGVTCCLRFPGQLNS 248

Query: 236 DLRKLAVNLIPFPRLHFFMVGFTPLTSRGSQQYRALTIPELTQQMWDAKNMMCAADPRHG 57
           DLRKLAVNLIPFPRLHFFMVGF PLTSRGSQQYRALTIPELTQQMWD+KNMMCAADPRHG
Sbjct: 249 DLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQQYRALTIPELTQQMWDSKNMMCAADPRHG 308

Query: 56  RYLTASAMFRGKMSTKEV 3
           RYLTASAMFRGKMSTKEV
Sbjct: 309 RYLTASAMFRGKMSTKEV 326


>ref|XP_003525399.1| PREDICTED: tubulin beta-1 chain-like [Glycine max]
          Length = 446

 Score =  610 bits (1574), Expect = e-172
 Identities = 294/318 (92%), Positives = 303/318 (95%)
 Frame = -1

Query: 956 AGQCGNQIGGKFWEVVCDEHGIDATGNYVGSSSLQLERVNVYYNEASGGRYVPRAVLMDL 777
           AGQCGNQIGGKFWEV+CDEHGIDATGNYVG+S LQLERVNVYYNEASGGRYVPRAVLMDL
Sbjct: 9   AGQCGNQIGGKFWEVMCDEHGIDATGNYVGNSHLQLERVNVYYNEASGGRYVPRAVLMDL 68

Query: 776 EPGTMDALRTGPYGQIFRPDNFVFGQNGAGNNWAKGHYTEGAELIDAVLDVVRKEAENCD 597
           EPGTMD+LR+GP+G+IFRPDNFVFGQNGAGNNWAKGHYTEGAELID+VLDVVRKEAENCD
Sbjct: 69  EPGTMDSLRSGPFGKIFRPDNFVFGQNGAGNNWAKGHYTEGAELIDSVLDVVRKEAENCD 128

Query: 596 CLQGFQICHXXXXXXXXXXXXXLISKIREEYPDRMMLTFSVFPSPKVSDTVVEPYNATLS 417
           CLQGFQICH             LISKIREEYPDRMMLTFSVFPSPKVSDTVVEPYNATLS
Sbjct: 129 CLQGFQICHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDTVVEPYNATLS 188

Query: 416 VHQLVENADECMVLDNEALYDICFRTLKLTNPSFGDLNHLISTTMSGVTCCLRFPGQLNS 237
           VHQLVENADECMVLDNEALYDICFRTLKLTNPSFGDLNHLISTTMSGVTCCLRFPGQLNS
Sbjct: 189 VHQLVENADECMVLDNEALYDICFRTLKLTNPSFGDLNHLISTTMSGVTCCLRFPGQLNS 248

Query: 236 DLRKLAVNLIPFPRLHFFMVGFTPLTSRGSQQYRALTIPELTQQMWDAKNMMCAADPRHG 57
           DLRKLAVNLIPFPRLHFFMVGF PLTSRGSQQYR+LTIPELTQQMWDA+NMMCAADPRHG
Sbjct: 249 DLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQQYRSLTIPELTQQMWDARNMMCAADPRHG 308

Query: 56  RYLTASAMFRGKMSTKEV 3
           RYLTASAMFRGKMSTKEV
Sbjct: 309 RYLTASAMFRGKMSTKEV 326


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