BLASTX nr result

ID: Dioscorea21_contig00000266 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00000266
         (552 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ACF06437.1| ribosomal L28-like protein [Elaeis guineensis]         175   5e-42
gb|ACF06504.1| 60S ribosomal protein L28 [Elaeis guineensis]          172   4e-41
ref|XP_004146830.1| PREDICTED: 60S ribosomal protein L28-2-like ...   162   2e-38
gb|AEO32764.1| hypothetical protein [Amblyomma maculatum]             162   3e-38
ref|XP_002514169.1| 60S ribosomal protein L28, putative [Ricinus...   160   9e-38

>gb|ACF06437.1| ribosomal L28-like protein [Elaeis guineensis]
          Length = 148

 Score =  175 bits (443), Expect = 5e-42
 Identities = 87/100 (87%), Positives = 96/100 (96%)
 Frame = +3

Query: 3   YKHSGLANKKSVSIQPGGEGLSVTLATTKTKKQNKPSSLYNRSVMKKEFRKMAKAVTNQV 182
           YKHSGLANKK+V+IQPGG+ LSV LAT+KTKKQNKP +LYNRSVMKKEFRKMAKAV NQV
Sbjct: 46  YKHSGLANKKTVAIQPGGKDLSVVLATSKTKKQNKPGNLYNRSVMKKEFRKMAKAVKNQV 105

Query: 183 TDNFYRPDLTKAALARLSAVHRSLKVSKSGVKKRNRQALK 302
           TDN+YRPDLTKAALARLSAVHRSLKV+KSGVKKRNRQA++
Sbjct: 106 TDNYYRPDLTKAALARLSAVHRSLKVAKSGVKKRNRQAVQ 145


>gb|ACF06504.1| 60S ribosomal protein L28 [Elaeis guineensis]
          Length = 148

 Score =  172 bits (435), Expect = 4e-41
 Identities = 85/100 (85%), Positives = 95/100 (95%)
 Frame = +3

Query: 3   YKHSGLANKKSVSIQPGGEGLSVTLATTKTKKQNKPSSLYNRSVMKKEFRKMAKAVTNQV 182
           YKHSGLANKK+VSIQPGG+ LSV LATTKTKKQNKP++LY++S MKKEFRKMAKAV NQV
Sbjct: 46  YKHSGLANKKTVSIQPGGKDLSVVLATTKTKKQNKPANLYHKSAMKKEFRKMAKAVMNQV 105

Query: 183 TDNFYRPDLTKAALARLSAVHRSLKVSKSGVKKRNRQALK 302
           T+N+YRPDLTKAALARLSAVHRSLKV+KSG KKRNRQA+K
Sbjct: 106 TENYYRPDLTKAALARLSAVHRSLKVAKSGAKKRNRQAVK 145


>ref|XP_004146830.1| PREDICTED: 60S ribosomal protein L28-2-like isoform 1 [Cucumis
           sativus] gi|449458191|ref|XP_004146831.1| PREDICTED: 60S
           ribosomal protein L28-2-like isoform 2 [Cucumis sativus]
           gi|449476678|ref|XP_004154804.1| PREDICTED: 60S
           ribosomal protein L28-2-like isoform 1 [Cucumis sativus]
           gi|449476681|ref|XP_004154805.1| PREDICTED: 60S
           ribosomal protein L28-2-like isoform 2 [Cucumis sativus]
          Length = 148

 Score =  162 bits (411), Expect = 2e-38
 Identities = 81/102 (79%), Positives = 94/102 (92%)
 Frame = +3

Query: 3   YKHSGLANKKSVSIQPGGEGLSVTLATTKTKKQNKPSSLYNRSVMKKEFRKMAKAVTNQV 182
           YKHSGLANKK+V+IQPGG+  S+ LATTK+KKQNKPSS  ++S+MKKEFR+MAKAVTNQV
Sbjct: 46  YKHSGLANKKTVTIQPGGKDQSILLATTKSKKQNKPSSSLHKSLMKKEFRRMAKAVTNQV 105

Query: 183 TDNFYRPDLTKAALARLSAVHRSLKVSKSGVKKRNRQALKKR 308
            DN+YRPDL KAALARLSAV+RSLKV+KSGVKKRNRQALK +
Sbjct: 106 ADNYYRPDLKKAALARLSAVNRSLKVAKSGVKKRNRQALKSK 147


>gb|AEO32764.1| hypothetical protein [Amblyomma maculatum]
          Length = 168

 Score =  162 bits (410), Expect = 3e-38
 Identities = 80/102 (78%), Positives = 97/102 (95%), Gaps = 1/102 (0%)
 Frame = +3

Query: 3   YKHSGLANKKSVSIQP-GGEGLSVTLATTKTKKQNKPSSLYNRSVMKKEFRKMAKAVTNQ 179
           +KHSGLANKK+VSIQP GG+ LSV +ATTKTKKQ+KP+SLY++S+MKKEF KMAK++TNQ
Sbjct: 67  FKHSGLANKKTVSIQPAGGKDLSVVVATTKTKKQSKPASLYHKSLMKKEFSKMAKSITNQ 126

Query: 180 VTDNFYRPDLTKAALARLSAVHRSLKVSKSGVKKRNRQALKK 305
           VT+N+YRPDLTKAALARLSAVHRSL+V+KSG KKRNRQA++K
Sbjct: 127 VTENYYRPDLTKAALARLSAVHRSLRVAKSGAKKRNRQAVRK 168


>ref|XP_002514169.1| 60S ribosomal protein L28, putative [Ricinus communis]
           gi|223546625|gb|EEF48123.1| 60S ribosomal protein L28,
           putative [Ricinus communis]
          Length = 144

 Score =  160 bits (406), Expect = 9e-38
 Identities = 81/99 (81%), Positives = 92/99 (92%)
 Frame = +3

Query: 3   YKHSGLANKKSVSIQPGGEGLSVTLATTKTKKQNKPSSLYNRSVMKKEFRKMAKAVTNQV 182
           YKHSGLANKK+VSIQPGG+ LSV LATTKTKKQNKP+S  ++SVM+KEFR+MAKAV+NQV
Sbjct: 46  YKHSGLANKKTVSIQPGGKDLSVVLATTKTKKQNKPASSLHKSVMRKEFRRMAKAVSNQV 105

Query: 183 TDNFYRPDLTKAALARLSAVHRSLKVSKSGVKKRNRQAL 299
            DN+YRPDL KAALARLSAV RSLKV+KSGVKKRNRQA+
Sbjct: 106 GDNYYRPDLKKAALARLSAVQRSLKVAKSGVKKRNRQAV 144


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