BLASTX nr result

ID: Dioscorea21_contig00000254 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00000254
         (1531 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002267189.2| PREDICTED: uncharacterized protein LOC100245...   335   2e-89
ref|XP_002518115.1| PMP, putative [Ricinus communis] gi|22354271...   299   1e-78
ref|XP_002297811.1| predicted protein [Populus trichocarpa] gi|2...   295   2e-77
ref|XP_002304710.1| predicted protein [Populus trichocarpa] gi|1...   295   2e-77
gb|ABR17427.1| unknown [Picea sitchensis]                             291   4e-76

>ref|XP_002267189.2| PREDICTED: uncharacterized protein LOC100245241 [Vitis vinifera]
            gi|298205266|emb|CBI17325.3| unnamed protein product
            [Vitis vinifera]
          Length = 380

 Score =  335 bits (859), Expect = 2e-89
 Identities = 187/381 (49%), Positives = 255/381 (66%), Gaps = 6/381 (1%)
 Frame = -2

Query: 1407 MDVRAILNVSLVILASIICLEARVASSRSVVFLDDSQHRYIRSNPSDGERKMSSISAEEV 1228
            MD    +  SL+++ S++C+++R  +S S+ FLD   H ++R   SD   K+ S+   EV
Sbjct: 1    MDCCISMGFSLLLIFSLLCIQSRAGASGSIFFLDSPTHPFLRPRSSDDAMKVDSVLLPEV 60

Query: 1227 AATVSVLLGFAPSPLLDAKSSSKLNEILLPSPFDRPRAVFAMEVRGTEDSLLSTGHLNSL 1048
             A VSVLLGFAPS  L A SSSKLNEILLP+PF+RPR+V  +EVRG ED  +   H N+L
Sbjct: 61   GAAVSVLLGFAPSSTLSAASSSKLNEILLPNPFERPRSVLMLEVRGVEDPEVVVEHDNAL 120

Query: 1047 SGNTLSTE-VHGSSIAAIELPGDAEISVVPLDESISVDCDVSCLGKELHILAQWLGGSFA 871
              + L  +  +G+  A I LPGD ++SVV LDE +S D + +C  KE+   A W+GG + 
Sbjct: 121  FRSALKRDFFYGTDKAEILLPGDDKVSVVSLDERLSFDSNTNCTDKEISDFASWMGGLYV 180

Query: 870  GSA-ESLDGELKVPLASGTTLSLQLTKKADLKFVLSVVSLVRNIKNAVKIHEDISQSSVN 694
             +A + L+GEL +PLA G  L+L ++KKAD +F+ S++SL+ NIK  +++ +D+S S  N
Sbjct: 181  ANALKPLNGELTIPLAGGANLNLHMSKKADTEFIASLLSLIHNIKRVIEMRQDLSGSMQN 240

Query: 693  PAELLFGRFMGIEALKEEYGPGNVVDQGVELFQTILNKLLDLLQKSYGGKIVGVILCDKE 514
             AELL G F GI+ L E+YGP  V  QGVEL  T L+K+   LQ +Y G+IVGVI     
Sbjct: 241  AAELLTGCFDGIKVLDEQYGPSGVAQQGVELLLTTLSKMFGSLQVAYKGQIVGVI-SFTG 299

Query: 513  TYPDSKAMLELSFS--PRTSRLLE-EDSLDVSK-REVLLVRRSLAWITGVILLVSTFIGI 346
            T P S+ ML + F+  P    L E EDS D++   ++ LVR++LAWITG+IL+ ST +GI
Sbjct: 300  TPPSSEKMLNVMFTSQPSARWLAETEDSPDLTAIMKIALVRKTLAWITGIILVASTLLGI 359

Query: 345  YLLLNMPLTRDTLLYSNVKLD 283
            Y LLNMPLTRDTLLYSNVKLD
Sbjct: 360  YFLLNMPLTRDTLLYSNVKLD 380


>ref|XP_002518115.1| PMP, putative [Ricinus communis] gi|223542711|gb|EEF44248.1| PMP,
            putative [Ricinus communis]
          Length = 369

 Score =  299 bits (766), Expect = 1e-78
 Identities = 181/381 (47%), Positives = 252/381 (66%), Gaps = 8/381 (2%)
 Frame = -2

Query: 1401 VRAILNVSLVILASIIC-LEARVASSRSVVFLDDSQHRYIRSNPSDGERKMSSISAEEVA 1225
            +R++ N  L+IL+S+ C L +    + S++F+D + H+Y+R++     R M+ +   EV 
Sbjct: 5    IRSVFN--LLILSSLFCSLASAKERTGSILFIDGNSHQYLRNDVVQS-RLMTPV---EVG 58

Query: 1224 ATVSVLLGFAPSPLLDAKSSSKLNEILLPSPFDRPRAVFAMEVRGTEDSLLSTGHLNSLS 1045
            A VSVLLGFAP   L A  SSKLNE+L+P+PFDRP AVF +EV G  D + S    N +S
Sbjct: 59   AAVSVLLGFAPPVTLSAAGSSKLNEVLMPNPFDRPGAVFLLEVTGVNDLVASE---NVMS 115

Query: 1044 GNTLSTEVH-GSSIAAIELPGDAEISVVPLDESISVDCDVSCLGKELHILAQWLGGSF-A 871
             N    +    S  A IELPG+ E+SV+ LDE +    D     KEL  L  WLGGS+  
Sbjct: 116  SNAFKRKFALDSDKAQIELPGE-EVSVISLDEKLGDFTD-----KELSDLVSWLGGSYIV 169

Query: 870  GSAESLDGELKVPLASGTTLSLQLTKKADLKFVLSVVSLVRNIKNAVKIHEDISQSSVNP 691
               ESL+GEL +PLASG  L L ++KKAD +F+ S+++L  N K A+++HED+SQ+   P
Sbjct: 170  NGLESLNGELIIPLASGANLKLHMSKKADREFIESLLTLFHNSKRAIELHEDLSQAIHGP 229

Query: 690  AELLFGRFMGIEALKEEYGPGNVVDQGVELFQTILNKLLDLLQKSYGGKIVGVILCDKET 511
            AEL+ G F GI+AL+E+YG   VV QG+EL    L+K++D  Q +Y G+IVGVI+ ++ +
Sbjct: 230  AELIMGHFHGIKALQEQYG-REVVQQGLELLVATLSKMVDSFQVAYKGQIVGVIISNERS 288

Query: 510  YPDSKAMLELSFS--PRTSRLLE---EDSLDVSKREVLLVRRSLAWITGVILLVSTFIGI 346
              +S+ +L + F+  P    L E    ++ D +  EV LVR++LAW+TG+ILL+ST IGI
Sbjct: 289  TLESEKLLNVMFTSWPSARWLAEAEGSNATDTAIMEVALVRKTLAWLTGLILLISTLIGI 348

Query: 345  YLLLNMPLTRDTLLYSNVKLD 283
            YLLLNMPLTRDTLLYSNVKLD
Sbjct: 349  YLLLNMPLTRDTLLYSNVKLD 369


>ref|XP_002297811.1| predicted protein [Populus trichocarpa] gi|222845069|gb|EEE82616.1|
            predicted protein [Populus trichocarpa]
          Length = 372

 Score =  295 bits (756), Expect = 2e-77
 Identities = 176/379 (46%), Positives = 252/379 (66%), Gaps = 6/379 (1%)
 Frame = -2

Query: 1401 VRAILNVSLVILASIICLEARVASSRSVVFLDDSQHRYIRS-NPSDGERKMSSISAEEVA 1225
            +R++L+  L ++ S++   A+  ++ SV F+D    +Y+R+ +P D    + S+S  EV 
Sbjct: 5    IRSVLH--LFVIFSLLFSLAKAETAGSVFFIDSQTRQYLRTPSPKD---VVQSMSLREVG 59

Query: 1224 ATVSVLLGFAPSPLLDAKSSSKLNEILLPSPFDRPRAVFAMEVRGTEDSLLSTGHLNSL- 1048
            A VSVLLGFAPS  L A SSSKLNE+L+P+PF+RPRAVF +EV G E+        N++ 
Sbjct: 60   AAVSVLLGFAPSDSLSAASSSKLNEVLMPNPFNRPRAVFMLEVTGGEEIPSVAEQANAMF 119

Query: 1047 SGNTLSTEVHGSSIAAIELPGDAEISVVPLDESISVDCDVSCLGKELHILAQWLGGSFA- 871
            +G   S  V GS  A IELPG+ E+SVV LDE ++   D     KE+   A WLGGS+  
Sbjct: 120  NGAFKSKIVLGSDKAGIELPGE-EVSVVSLDEELADFTD-----KEISDFASWLGGSYVV 173

Query: 870  GSAESLDGELKVPLASGTTLSLQLTKKADLKFVLSVVSLVRNIKNAVKIHEDISQSSVNP 691
               E+ +GEL +PLASG T S  ++KKA+ +F+ S+++L RN + AV++HED+SQS+  P
Sbjct: 174  DPLEAWNGELAIPLASGATTSFHMSKKANREFIASLLALFRNSRRAVEMHEDLSQSTQPP 233

Query: 690  AELLFGRFMGIEALKEEYGPGNVVDQGVELFQTILNKLLDLLQKSYGGKIVGVILCDKET 511
            AELL G F G++AL E+YGP     +G+EL  T L+K+ D LQ +Y G+I GVI  +   
Sbjct: 234  AELLKGCFDGLKALGEQYGPEGAAQKGLELLLTTLSKMFDSLQTAYKGQIAGVIFFNTAP 293

Query: 510  YPDSKAMLELSFSPRTS-RLLEEDSL--DVSKREVLLVRRSLAWITGVILLVSTFIGIYL 340
              +S+ +L++  + + S R LEE     + +  EV LVR +LAWITG++L+++T +GIY 
Sbjct: 294  ASESETVLDVMLTSQPSARWLEETKTPSNGTIAEVALVRMTLAWITGIVLIIATLLGIYY 353

Query: 339  LLNMPLTRDTLLYSNVKLD 283
            LLNMP+TRDTLLYSNVKLD
Sbjct: 354  LLNMPITRDTLLYSNVKLD 372


>ref|XP_002304710.1| predicted protein [Populus trichocarpa] gi|118488094|gb|ABK95867.1|
            unknown [Populus trichocarpa] gi|222842142|gb|EEE79689.1|
            predicted protein [Populus trichocarpa]
          Length = 372

 Score =  295 bits (755), Expect = 2e-77
 Identities = 174/377 (46%), Positives = 247/377 (65%), Gaps = 4/377 (1%)
 Frame = -2

Query: 1401 VRAILNVSLVILASIICLEARVASSRSVVFLDDSQHRYIRSNPSDGERKMSSISAEEVAA 1222
            +R++L   LVI++S+    A+   S SV+F+D    +Y+RS   +   + +S+S +EV A
Sbjct: 5    IRSVL--PLVIISSLFYSLAKAEISGSVIFIDSQTRQYLRSPSPNDVVQSNSMSLQEVGA 62

Query: 1221 TVSVLLGFAPSPLLDAKSSSKLNEILLPSPFDRPRAVFAMEVRGTEDSLLSTGHLNSLSG 1042
             VSVLLGF PS  L A SS KLNE+LLP+PF+RPRAVF +EV G   S+    ++   + 
Sbjct: 63   AVSVLLGFVPSDALSATSSLKLNEVLLPNPFNRPRAVFMLEVTGELPSVADQANV-MFNA 121

Query: 1041 NTLSTEVHGSSIAAIELPGDAEISVVPLDESISVDCDVSCLGKELHILAQWLGGSFA-GS 865
               S  V GS+ A I+LPG+ E+SVV LDE       V    K++   A WLGGS+A   
Sbjct: 122  AYKSKIVPGSNKADIQLPGE-EVSVVSLDEEF-----VDFTDKDISDFASWLGGSYAVDP 175

Query: 864  AESLDGELKVPLASGTTLSLQLTKKADLKFVLSVVSLVRNIKNAVKIHEDISQSSVNPAE 685
             E+L GEL +PLASG T+ L ++KKA+ +F+ S+++L+RN + AV++H D+S S+  PAE
Sbjct: 176  LEALKGELAIPLASGATIDLHMSKKANREFIASLLALLRNSRKAVEMHGDLSLSNQPPAE 235

Query: 684  LLFGRFMGIEALKEEYGPGNVVDQGVELFQTILNKLLDLLQKSYGGKIVGVILCDKETYP 505
            LL G F G++AL+E YGP     +G+EL  T+L+K+ D LQ +Y G+IVG IL +    P
Sbjct: 236  LLKGSFDGLKALQEHYGPEGAAQKGLELLITMLSKMFDSLQAAYKGQIVGAILFNTAPAP 295

Query: 504  DSKAMLELSFSPRTS-RLLEEDSLDVSK--REVLLVRRSLAWITGVILLVSTFIGIYLLL 334
            +SK +L +  + R S R LEE      +    V LVR +LAWITG++L+++T +GIY L 
Sbjct: 296  ESKTLLNVMLTSRPSARWLEETKEPTIEAIAVVALVRITLAWITGIVLIIATLLGIYFLF 355

Query: 333  NMPLTRDTLLYSNVKLD 283
            +MPLT+DTLLYSNVKLD
Sbjct: 356  SMPLTKDTLLYSNVKLD 372


>gb|ABR17427.1| unknown [Picea sitchensis]
          Length = 382

 Score =  291 bits (744), Expect = 4e-76
 Identities = 164/361 (45%), Positives = 230/361 (63%), Gaps = 5/361 (1%)
 Frame = -2

Query: 1350 LEARVASSRSVVFLDDSQHRYIRSNPSDGERKMSSISAEEVAATVSVLLGFAPSPLLDAK 1171
            ++A      S++FLD+  HR+ R+   + E +  S++  +VA+TVSVLLGFAPS    + 
Sbjct: 24   MKAEATGGGSLLFLDNPHHRFFRTESLESESEEISMTQSDVASTVSVLLGFAPSSTNPSV 83

Query: 1170 SSSKLNEILLPSPFDRPRAVFAMEVRGTEDSLLSTGHLNSLSGNTLSTE--VHGSSIAAI 997
            SSSKL+ +LLP+PFDRPR VF ++ RG +  LLS   +  L     S    V  SS  A+
Sbjct: 84   SSSKLDGLLLPNPFDRPRGVFMLDARGIDQELLSELDVPKLGLGAYSYRQLVAESSHTAV 143

Query: 996  ELPGDAEISVVPLDESISVDCDVSCLGKELHILAQWLGGSFAGSAESLDGELKVPLASGT 817
            ELP D E+ +  L+E+   +CD  C+ +EL  LA WLGGS+    + L G+  +PL+ G+
Sbjct: 144  ELPED-EVILESLNEASGDECDAHCIEQELVDLASWLGGSYTVVEQLLQGKFSIPLSKGS 202

Query: 816  TLSLQLTKKADLKFVLSVVSLVRNIKNAVKIHEDISQSSVNPAELLFGRFMGIEALKEEY 637
             L+L L K+AD  F   +VSL RNI+  V +H D+++ S +PA LL G F+G++AL+E Y
Sbjct: 203  FLNLDLLKRADQIFAKELVSLRRNIRWVVSMH-DLAEGSPDPALLLMGTFVGVQALREHY 261

Query: 636  GPGNVVDQGVELFQTILNKLLDLLQKSYGGKIVGVILCDKETYPDSKAMLELSFSPRTSR 457
            G  ++  +G+ELF  +  KLLD LQ SYGG+ VGV++ +    P S+ M ++  S RTSR
Sbjct: 262  GQDDISREGLELFLNVAAKLLDSLQLSYGGQFVGVVVMNGNAVPASEGMFDVKLSSRTSR 321

Query: 456  LLEEDSLDVSK---REVLLVRRSLAWITGVILLVSTFIGIYLLLNMPLTRDTLLYSNVKL 286
             L E  L  S     EV   RR+LAW T +ILL++T +G+Y L NMPLTRDTLLYSNVKL
Sbjct: 322  WLTEKFLAESNSTTAEVKPARRALAWSTAIILLIATLMGVYYLFNMPLTRDTLLYSNVKL 381

Query: 285  D 283
            D
Sbjct: 382  D 382


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