BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00000253
         (469 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|O48550.1|RBS_ZANAE RecName: Full=Ribulose bisphosphate carbox...   195   3e-48
pdb|3AXK|S Chain S, Structure Of Rice Rubisco In Complex With Na...   192   2e-47
ref|XP_003581511.1| PREDICTED: ribulose bisphosphate carboxylase...   189   2e-46
ref|NP_001066607.1| Os12g0292400 [Oryza sativa Japonica Group] g...   189   3e-46
ref|NP_001066606.1| Os12g0291400 [Oryza sativa Japonica Group] g...   189   3e-46

>sp|O48550.1|RBS_ZANAE RecName: Full=Ribulose bisphosphate carboxylase small chain,
           chloroplastic; Short=RuBisCO small subunit; Flags:
           Precursor gi|2665670|gb|AAC18406.1|
           ribulose-1,5-bisphosphate carboxylase/oxygenase small
           subunit [Zantedeschia aethiopica]
          Length = 178

 Score =  195 bits (496), Expect = 3e-48
 Identities = 83/109 (76%), Positives = 97/109 (88%)
 Frame = +3

Query: 3   ETLSYLPKLTDDQLVKQFDYLLRSGWVPCIEFCRVGFVYREHHRSPGYYDGRYWTMWKLP 182
           ETLSYLP LT +QL ++ DYL+R+GW+PCIEFC+VGFVYRE+H SPGYYDGRYWTMWKLP
Sbjct: 69  ETLSYLPPLTREQLGQEVDYLIRNGWIPCIEFCKVGFVYREYHNSPGYYDGRYWTMWKLP 128

Query: 183 MFGCTDATQVLKEVRNCEEEHPDKFNRVIGFDNVRQVQCISFITYKPPG 329
           MFGCTD++QVLKEV  C + +PD FNR+IGFDN RQVQCISF+TYKP G
Sbjct: 129 MFGCTDSSQVLKEVDECSKAYPDYFNRIIGFDNTRQVQCISFLTYKPEG 177


>pdb|3AXK|S Chain S, Structure Of Rice Rubisco In Complex With Nadp(H)
           gi|383875289|pdb|3AXK|T Chain T, Structure Of Rice
           Rubisco In Complex With Nadp(H)
          Length = 129

 Score =  192 bits (489), Expect = 2e-47
 Identities = 86/112 (76%), Positives = 97/112 (86%)
 Frame = +3

Query: 3   ETLSYLPKLTDDQLVKQFDYLLRSGWVPCIEFCRVGFVYREHHRSPGYYDGRYWTMWKLP 182
           ETLSYLP LT + L+KQ +YLLRS WVPC+EF +VGFVYRE+HRSPGYYDGRYWTMWKLP
Sbjct: 14  ETLSYLPPLTVEDLLKQIEYLLRSKWVPCLEFSKVGFVYRENHRSPGYYDGRYWTMWKLP 73

Query: 183 MFGCTDATQVLKEVRNCEEEHPDKFNRVIGFDNVRQVQCISFITYKPPGFTE 338
           MFGCTDATQVLKE+   ++ +PD F R+IGFDNVRQVQCISFI YKPPG  E
Sbjct: 74  MFGCTDATQVLKELEEAKKAYPDAFVRIIGFDNVRQVQCISFIAYKPPGCEE 125


>ref|XP_003581511.1| PREDICTED: ribulose bisphosphate carboxylase small chain A,
           chloroplastic-like [Brachypodium distachyon]
          Length = 176

 Score =  189 bits (481), Expect = 2e-46
 Identities = 84/112 (75%), Positives = 97/112 (86%)
 Frame = +3

Query: 3   ETLSYLPKLTDDQLVKQFDYLLRSGWVPCIEFCRVGFVYREHHRSPGYYDGRYWTMWKLP 182
           ETLSYLP L+ + L+KQ +YL+RS WVPC+EF +VGFV+REH RSPGYYDGRYWTMWKLP
Sbjct: 61  ETLSYLPPLSVEALLKQIEYLIRSKWVPCLEFSKVGFVFREHARSPGYYDGRYWTMWKLP 120

Query: 183 MFGCTDATQVLKEVRNCEEEHPDKFNRVIGFDNVRQVQCISFITYKPPGFTE 338
           MFGCTDATQVLKE+   ++E+PD F R+IGFDNVRQVQCISFI YKPPG  E
Sbjct: 121 MFGCTDATQVLKELEEAKKEYPDAFIRIIGFDNVRQVQCISFIAYKPPGCQE 172


>ref|NP_001066607.1| Os12g0292400 [Oryza sativa Japonica Group]
           gi|77554383|gb|ABA97179.1| Ribulose bisphosphate
           carboxylase small chain C, chloroplast precursor,
           putative, expressed [Oryza sativa Japonica Group]
           gi|77554384|gb|ABA97180.1| Ribulose bisphosphate
           carboxylase small chain C, chloroplast precursor,
           putative, expressed [Oryza sativa Japonica Group]
           gi|113649114|dbj|BAF29626.1| Os12g0292400 [Oryza sativa
           Japonica Group] gi|125579070|gb|EAZ20216.1| hypothetical
           protein OsJ_35820 [Oryza sativa Japonica Group]
           gi|149390921|gb|ABR25478.1| ribulose bisphosphate
           carboxylase small chain c [Oryza sativa Indica Group]
           gi|215687018|dbj|BAG90832.1| unnamed protein product
           [Oryza sativa Japonica Group]
           gi|215687290|dbj|BAG91855.1| unnamed protein product
           [Oryza sativa Japonica Group]
          Length = 175

 Score =  189 bits (479), Expect = 3e-46
 Identities = 85/112 (75%), Positives = 96/112 (85%)
 Frame = +3

Query: 3   ETLSYLPKLTDDQLVKQFDYLLRSGWVPCIEFCRVGFVYREHHRSPGYYDGRYWTMWKLP 182
           ETLSYLP LT + L+KQ +YLLRS WVPC+EF +VGFVYRE+HRSPGYYDGRYWTMWKLP
Sbjct: 60  ETLSYLPPLTVEDLLKQIEYLLRSKWVPCLEFSKVGFVYRENHRSPGYYDGRYWTMWKLP 119

Query: 183 MFGCTDATQVLKEVRNCEEEHPDKFNRVIGFDNVRQVQCISFITYKPPGFTE 338
           MFGCTDATQVLKE+   ++ +PD F R+IGFDNVRQVQ ISFI YKPPG  E
Sbjct: 120 MFGCTDATQVLKELEEAKKAYPDAFVRIIGFDNVRQVQLISFIAYKPPGCEE 171


>ref|NP_001066606.1| Os12g0291400 [Oryza sativa Japonica Group]
           gi|77554377|gb|ABA97173.1| Ribulose bisphosphate
           carboxylase small chain A, chloroplast precursor,
           putative, expressed [Oryza sativa Japonica Group]
           gi|108862507|gb|ABG21973.1| Ribulose bisphosphate
           carboxylase small chain A, chloroplast precursor,
           putative, expressed [Oryza sativa Japonica Group]
           gi|113649113|dbj|BAF29625.1| Os12g0291400 [Oryza sativa
           Japonica Group] gi|125579068|gb|EAZ20214.1| hypothetical
           protein OsJ_35814 [Oryza sativa Japonica Group]
           gi|215704569|dbj|BAG94202.1| unnamed protein product
           [Oryza sativa Japonica Group]
          Length = 175

 Score =  189 bits (479), Expect = 3e-46
 Identities = 85/112 (75%), Positives = 96/112 (85%)
 Frame = +3

Query: 3   ETLSYLPKLTDDQLVKQFDYLLRSGWVPCIEFCRVGFVYREHHRSPGYYDGRYWTMWKLP 182
           ETLSYLP LT + L+KQ +YLLRS WVPC+EF +VGFVYRE+HRSPGYYDGRYWTMWKLP
Sbjct: 60  ETLSYLPPLTVEDLLKQIEYLLRSKWVPCLEFSKVGFVYRENHRSPGYYDGRYWTMWKLP 119

Query: 183 MFGCTDATQVLKEVRNCEEEHPDKFNRVIGFDNVRQVQCISFITYKPPGFTE 338
           MFGCTDATQVLKE+   ++ +PD F R+IGFDNVRQVQ ISFI YKPPG  E
Sbjct: 120 MFGCTDATQVLKELEEAKKAYPDAFVRIIGFDNVRQVQLISFIAYKPPGCEE 171