BLASTX nr result

ID: Dioscorea21_contig00000240 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00000240
         (726 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002518942.1| 50S robosomal protein L11, putative [Ricinus...   115   7e-24
ref|XP_002298976.1| predicted protein [Populus trichocarpa] gi|2...   115   1e-23
emb|CBI34616.3| unnamed protein product [Vitis vinifera]              114   2e-23
ref|XP_002278388.1| PREDICTED: 50S ribosomal protein L11, chloro...   114   2e-23
ref|XP_003558943.1| PREDICTED: 50S ribosomal protein L11, chloro...   112   6e-23

>ref|XP_002518942.1| 50S robosomal protein L11, putative [Ricinus communis]
           gi|223541929|gb|EEF43475.1| 50S robosomal protein L11,
           putative [Ricinus communis]
          Length = 221

 Score =  115 bits (289), Expect = 7e-24
 Identities = 56/64 (87%), Positives = 61/64 (95%)
 Frame = +3

Query: 3   EKGSKEPQREKVGKVTAEQVRAIATEKMPDLNCTSIESAMRIIAGTAANMGIDVDPPILE 182
           EKGSK+PQ EKVGKVT EQ+RAIA EK+PDLNCTSIESAMRIIAGTAANMGIDV+PP+LE
Sbjct: 155 EKGSKDPQIEKVGKVTIEQLRAIAAEKLPDLNCTSIESAMRIIAGTAANMGIDVEPPVLE 214

Query: 183 PKKK 194
           PKKK
Sbjct: 215 PKKK 218


>ref|XP_002298976.1| predicted protein [Populus trichocarpa] gi|222846234|gb|EEE83781.1|
           predicted protein [Populus trichocarpa]
          Length = 174

 Score =  115 bits (287), Expect = 1e-23
 Identities = 55/64 (85%), Positives = 61/64 (95%)
 Frame = +3

Query: 3   EKGSKEPQREKVGKVTAEQVRAIATEKMPDLNCTSIESAMRIIAGTAANMGIDVDPPILE 182
           EKGSK+P+ EKVGKVT +Q+R IATEK+PDLNCT+IESAMRIIAGTAANMGIDVDPPILE
Sbjct: 108 EKGSKDPKMEKVGKVTIDQLRTIATEKLPDLNCTTIESAMRIIAGTAANMGIDVDPPILE 167

Query: 183 PKKK 194
           PKKK
Sbjct: 168 PKKK 171


>emb|CBI34616.3| unnamed protein product [Vitis vinifera]
          Length = 160

 Score =  114 bits (286), Expect = 2e-23
 Identities = 53/64 (82%), Positives = 62/64 (96%)
 Frame = +3

Query: 3   EKGSKEPQREKVGKVTAEQVRAIATEKMPDLNCTSIESAMRIIAGTAANMGIDVDPPILE 182
           EKG+K+P++EKVGK+T EQ+R IATEK+PDLNCTSIESAMRIIAGTAANMGI+VDPP+LE
Sbjct: 94  EKGAKDPKQEKVGKITIEQLRTIATEKLPDLNCTSIESAMRIIAGTAANMGIEVDPPVLE 153

Query: 183 PKKK 194
           PKKK
Sbjct: 154 PKKK 157


>ref|XP_002278388.1| PREDICTED: 50S ribosomal protein L11, chloroplastic-like [Vitis
           vinifera]
          Length = 217

 Score =  114 bits (286), Expect = 2e-23
 Identities = 53/64 (82%), Positives = 62/64 (96%)
 Frame = +3

Query: 3   EKGSKEPQREKVGKVTAEQVRAIATEKMPDLNCTSIESAMRIIAGTAANMGIDVDPPILE 182
           EKG+K+P++EKVGK+T EQ+R IATEK+PDLNCTSIESAMRIIAGTAANMGI+VDPP+LE
Sbjct: 151 EKGAKDPKQEKVGKITIEQLRTIATEKLPDLNCTSIESAMRIIAGTAANMGIEVDPPVLE 210

Query: 183 PKKK 194
           PKKK
Sbjct: 211 PKKK 214


>ref|XP_003558943.1| PREDICTED: 50S ribosomal protein L11, chloroplastic-like
           [Brachypodium distachyon]
          Length = 213

 Score =  112 bits (281), Expect = 6e-23
 Identities = 55/64 (85%), Positives = 60/64 (93%)
 Frame = +3

Query: 3   EKGSKEPQREKVGKVTAEQVRAIATEKMPDLNCTSIESAMRIIAGTAANMGIDVDPPILE 182
           EKGSKEPQREKVGKVTA+QVR IA EK+PDLNC +IESAMRIIAGTAANMGIDVDPPIL+
Sbjct: 147 EKGSKEPQREKVGKVTADQVRTIAQEKLPDLNCKTIESAMRIIAGTAANMGIDVDPPILQ 206

Query: 183 PKKK 194
            K+K
Sbjct: 207 KKEK 210


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