BLASTX nr result

ID: Dioscorea21_contig00000239 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00000239
         (817 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002298976.1| predicted protein [Populus trichocarpa] gi|2...   257   2e-66
ref|XP_002518942.1| 50S robosomal protein L11, putative [Ricinus...   256   4e-66
emb|CBI34616.3| unnamed protein product [Vitis vinifera]              255   7e-66
ref|XP_002278388.1| PREDICTED: 50S ribosomal protein L11, chloro...   255   7e-66
ref|XP_002317659.1| predicted protein [Populus trichocarpa] gi|2...   254   2e-65

>ref|XP_002298976.1| predicted protein [Populus trichocarpa] gi|222846234|gb|EEE83781.1|
           predicted protein [Populus trichocarpa]
          Length = 174

 Score =  257 bits (656), Expect = 2e-66
 Identities = 126/139 (90%), Positives = 136/139 (97%)
 Frame = +3

Query: 294 LALEAGKATPAPPVGPALGSKGVNIMAFCKEYNAKTAEKAGYVIPVEITVYDDKSFTFVL 473
           LALEAGKATPAPPVGPALGSKGVNIMAFCK+YNA+TA+KAGYVIPVEITVYDDKSFTF+L
Sbjct: 33  LALEAGKATPAPPVGPALGSKGVNIMAFCKDYNARTADKAGYVIPVEITVYDDKSFTFIL 92

Query: 474 KTPPASVLLLKAAGVEKGSKEPQREKVGKVTAEQVRAIATEKMPDLNCTSIESAMRIIAG 653
           KTPPASVLLLKAAGVEKGSK+P+ EKVGKVT +Q+R IATEK+PDLNCT+IESAMRIIAG
Sbjct: 93  KTPPASVLLLKAAGVEKGSKDPKMEKVGKVTIDQLRTIATEKLPDLNCTTIESAMRIIAG 152

Query: 654 TAANMGIDVDPPILEPKKK 710
           TAANMGIDVDPPILEPKKK
Sbjct: 153 TAANMGIDVDPPILEPKKK 171


>ref|XP_002518942.1| 50S robosomal protein L11, putative [Ricinus communis]
           gi|223541929|gb|EEF43475.1| 50S robosomal protein L11,
           putative [Ricinus communis]
          Length = 221

 Score =  256 bits (654), Expect = 4e-66
 Identities = 125/139 (89%), Positives = 136/139 (97%)
 Frame = +3

Query: 294 LALEAGKATPAPPVGPALGSKGVNIMAFCKEYNAKTAEKAGYVIPVEITVYDDKSFTFVL 473
           LALEAGKATPAPPVGPALG+KGVNIMAFCK+YNAKTA+KAGY+IPVEITVYDD+SFTF+L
Sbjct: 80  LALEAGKATPAPPVGPALGAKGVNIMAFCKDYNAKTADKAGYIIPVEITVYDDRSFTFIL 139

Query: 474 KTPPASVLLLKAAGVEKGSKEPQREKVGKVTAEQVRAIATEKMPDLNCTSIESAMRIIAG 653
           KTPPASVLLLKAAGVEKGSK+PQ EKVGKVT EQ+RAIA EK+PDLNCTSIESAMRIIAG
Sbjct: 140 KTPPASVLLLKAAGVEKGSKDPQIEKVGKVTIEQLRAIAAEKLPDLNCTSIESAMRIIAG 199

Query: 654 TAANMGIDVDPPILEPKKK 710
           TAANMGIDV+PP+LEPKKK
Sbjct: 200 TAANMGIDVEPPVLEPKKK 218


>emb|CBI34616.3| unnamed protein product [Vitis vinifera]
          Length = 160

 Score =  255 bits (652), Expect = 7e-66
 Identities = 124/139 (89%), Positives = 136/139 (97%)
 Frame = +3

Query: 294 LALEAGKATPAPPVGPALGSKGVNIMAFCKEYNAKTAEKAGYVIPVEITVYDDKSFTFVL 473
           LALEAGKATPAPPVGPALGSKGVNIMAFCK+YNA+TA+KAGYVIPVEITVYDDKSFTFVL
Sbjct: 19  LALEAGKATPAPPVGPALGSKGVNIMAFCKDYNARTADKAGYVIPVEITVYDDKSFTFVL 78

Query: 474 KTPPASVLLLKAAGVEKGSKEPQREKVGKVTAEQVRAIATEKMPDLNCTSIESAMRIIAG 653
           KTPPASVLLLKAAG EKG+K+P++EKVGK+T EQ+R IATEK+PDLNCTSIESAMRIIAG
Sbjct: 79  KTPPASVLLLKAAGAEKGAKDPKQEKVGKITIEQLRTIATEKLPDLNCTSIESAMRIIAG 138

Query: 654 TAANMGIDVDPPILEPKKK 710
           TAANMGI+VDPP+LEPKKK
Sbjct: 139 TAANMGIEVDPPVLEPKKK 157


>ref|XP_002278388.1| PREDICTED: 50S ribosomal protein L11, chloroplastic-like [Vitis
           vinifera]
          Length = 217

 Score =  255 bits (652), Expect = 7e-66
 Identities = 124/139 (89%), Positives = 136/139 (97%)
 Frame = +3

Query: 294 LALEAGKATPAPPVGPALGSKGVNIMAFCKEYNAKTAEKAGYVIPVEITVYDDKSFTFVL 473
           LALEAGKATPAPPVGPALGSKGVNIMAFCK+YNA+TA+KAGYVIPVEITVYDDKSFTFVL
Sbjct: 76  LALEAGKATPAPPVGPALGSKGVNIMAFCKDYNARTADKAGYVIPVEITVYDDKSFTFVL 135

Query: 474 KTPPASVLLLKAAGVEKGSKEPQREKVGKVTAEQVRAIATEKMPDLNCTSIESAMRIIAG 653
           KTPPASVLLLKAAG EKG+K+P++EKVGK+T EQ+R IATEK+PDLNCTSIESAMRIIAG
Sbjct: 136 KTPPASVLLLKAAGAEKGAKDPKQEKVGKITIEQLRTIATEKLPDLNCTSIESAMRIIAG 195

Query: 654 TAANMGIDVDPPILEPKKK 710
           TAANMGI+VDPP+LEPKKK
Sbjct: 196 TAANMGIEVDPPVLEPKKK 214


>ref|XP_002317659.1| predicted protein [Populus trichocarpa] gi|222860724|gb|EEE98271.1|
           predicted protein [Populus trichocarpa]
          Length = 174

 Score =  254 bits (649), Expect = 2e-65
 Identities = 126/139 (90%), Positives = 135/139 (97%)
 Frame = +3

Query: 294 LALEAGKATPAPPVGPALGSKGVNIMAFCKEYNAKTAEKAGYVIPVEITVYDDKSFTFVL 473
           LALEAGKATPAPPVGPALGSKGVNIMAFCK+YNA+TA+KAGYVIPVEITVYDDKSFTFVL
Sbjct: 33  LALEAGKATPAPPVGPALGSKGVNIMAFCKDYNARTADKAGYVIPVEITVYDDKSFTFVL 92

Query: 474 KTPPASVLLLKAAGVEKGSKEPQREKVGKVTAEQVRAIATEKMPDLNCTSIESAMRIIAG 653
           KTPPASVLLLKAAGVEKGSK+P+ EKVG VT +Q+RAIATEK+PDLNCT+IESAMRIIAG
Sbjct: 93  KTPPASVLLLKAAGVEKGSKDPKMEKVGMVTIDQLRAIATEKLPDLNCTTIESAMRIIAG 152

Query: 654 TAANMGIDVDPPILEPKKK 710
           TAANMGIDVDPPILEPK K
Sbjct: 153 TAANMGIDVDPPILEPKTK 171


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