BLASTX nr result

ID: Dioscorea21_contig00000234 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00000234
         (1302 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAH66419.1| H0622F05.2 [Oryza sativa Indica Group] gi|116309...   229   9e-58
emb|CAE01513.1| OJ991214_12.2 [Oryza sativa Japonica Group] gi|3...   229   9e-58
ref|XP_003572585.1| PREDICTED: F-box protein At3g44326-like [Bra...   217   6e-54
ref|XP_002453940.1| hypothetical protein SORBIDRAFT_04g021870 [S...   215   2e-53
ref|NP_001173010.1| Os02g0535901 [Oryza sativa Japonica Group] g...   214   4e-53

>emb|CAH66419.1| H0622F05.2 [Oryza sativa Indica Group] gi|116309400|emb|CAH66477.1|
            OSIGBa0137L20.6 [Oryza sativa Indica Group]
            gi|125548232|gb|EAY94054.1| hypothetical protein
            OsI_15831 [Oryza sativa Indica Group]
          Length = 302

 Score =  229 bits (585), Expect = 9e-58
 Identities = 121/254 (47%), Positives = 162/254 (63%), Gaps = 1/254 (0%)
 Frame = +3

Query: 333  TTTIEDLHPDLVVHALRLLDGPALAAASCATTHLHSVASHPDVWHDLCLSTWPSLRHHPE 512
            TTTIEDLH D++  ALR LDG +LAAASCAT  L ++A+ P+ W  LCL+ WPS+  HP 
Sbjct: 4    TTTIEDLHADVLARALRRLDGRSLAAASCATAGLRALAADPETWRALCLAEWPSMAGHPR 63

Query: 513  LLHAIIPSFAGSHRSFFSEAYPFPFL-AGQHGDPGNTIKLPRELLSAVDIYYKGVPILSR 689
            LL  + P      R  F++A+PFP   AG+ G  G    LP EL+SAVD+YY+G P+LSR
Sbjct: 64   LLSVVPP------RRLFADAFPFPRPDAGELGGGGGG-PLPSELVSAVDVYYRGAPLLSR 116

Query: 690  VIETETESQWFNGSPFRVDVLDRKDPDQTIMETPAVVSPGELTLSWIVIDPEGRKAVNLS 869
            V+ET   S WF GSPFRV+ ++ K P        A +SP EL LSW+V+DP   +AVN+S
Sbjct: 117  VVETPASSPWFLGSPFRVEAVECKKP-----AAEAALSPAELELSWVVVDPARGRAVNVS 171

Query: 870  SRRPVTVDKHWYSGETVVKYAMANGDRSVAAMITVTVASEEEGAHVREVSFMLEDEDGIC 1049
            SRR V VD+HWY+GET+V++A+  G          TV   E   ++ EVS  ++D DG  
Sbjct: 172  SRRAVAVDRHWYTGETLVRFAVVLG----GCKFETTVTCSEGAGNISEVSLAVQDADGAA 227

Query: 1050 LNGKESLAIIKGAM 1091
             +G+ SL ++  AM
Sbjct: 228  ASGERSLRLLAAAM 241


>emb|CAE01513.1| OJ991214_12.2 [Oryza sativa Japonica Group]
            gi|38346332|emb|CAD40583.2| OJ000126_13.14 [Oryza sativa
            Japonica Group] gi|125590340|gb|EAZ30690.1| hypothetical
            protein OsJ_14747 [Oryza sativa Japonica Group]
          Length = 311

 Score =  229 bits (585), Expect = 9e-58
 Identities = 121/254 (47%), Positives = 162/254 (63%), Gaps = 1/254 (0%)
 Frame = +3

Query: 333  TTTIEDLHPDLVVHALRLLDGPALAAASCATTHLHSVASHPDVWHDLCLSTWPSLRHHPE 512
            TTTIEDLH D++  ALR LDG +LAAASCAT  L ++A+ P+ W  LCL+ WPS+  HP 
Sbjct: 13   TTTIEDLHADVLARALRRLDGRSLAAASCATAGLRALAADPETWRALCLAEWPSMAGHPR 72

Query: 513  LLHAIIPSFAGSHRSFFSEAYPFPFL-AGQHGDPGNTIKLPRELLSAVDIYYKGVPILSR 689
            LL  + P      R  F++A+PFP   AG+ G  G    LP EL+SAVD+YY+G P+LSR
Sbjct: 73   LLSVVPP------RRLFADAFPFPRPDAGELGGGGGG-PLPSELVSAVDVYYRGAPLLSR 125

Query: 690  VIETETESQWFNGSPFRVDVLDRKDPDQTIMETPAVVSPGELTLSWIVIDPEGRKAVNLS 869
            V+ET   S WF GSPFRV+ ++ K P        A +SP EL LSW+V+DP   +AVN+S
Sbjct: 126  VVETPASSPWFLGSPFRVEAVECKKP-----AAEAALSPAELELSWVVVDPARGRAVNVS 180

Query: 870  SRRPVTVDKHWYSGETVVKYAMANGDRSVAAMITVTVASEEEGAHVREVSFMLEDEDGIC 1049
            SRR V VD+HWY+GET+V++A+  G          TV   E   ++ EVS  ++D DG  
Sbjct: 181  SRRAVAVDRHWYTGETLVRFAVVLG----GCKFETTVTCSEGAGNISEVSLAVQDADGAA 236

Query: 1050 LNGKESLAIIKGAM 1091
             +G+ SL ++  AM
Sbjct: 237  ASGERSLRLLAAAM 250


>ref|XP_003572585.1| PREDICTED: F-box protein At3g44326-like [Brachypodium distachyon]
          Length = 322

 Score =  217 bits (552), Expect = 6e-54
 Identities = 122/268 (45%), Positives = 162/268 (60%), Gaps = 10/268 (3%)
 Frame = +3

Query: 318  MALAHTTTIEDLHPDLVVHALRLLDGPALAAASCATTHLHSVASHPDVWHDLCLSTWPSL 497
            M  A TTT+EDL  D++  ALR LDGP+LAAASCAT+ L ++A+ P  W  LC++ WPSL
Sbjct: 1    MPAASTTTVEDLPADVLACALRRLDGPSLAAASCATSGLRALAADPGTWRALCVAQWPSL 60

Query: 498  RHHPELLHAIIPSFAGSHRSFFSEAYPFPFLAGQHGDPGNT------IKLPRELLSAVDI 659
                   H I+     S +  F++A+PFP +     D          + LP EL+SAVD+
Sbjct: 61   ETTTTQQHNIL---LDSPQRLFADAFPFPSIPSSTTDHHAAAAALPDLPLPCELISAVDV 117

Query: 660  YYKG----VPILSRVIETETESQWFNGSPFRVDVLDRKDPDQTIMETPAVVSPGELTLSW 827
            Y+KG     P+ SRV+ET T S WF  SPF VD +  KDP + +    A  SP EL LSW
Sbjct: 118  YHKGGSASAPLFSRVLETSTSSSWFLASPFCVDAVGSKDPVRAV----ASFSPAELELSW 173

Query: 828  IVIDPEGRKAVNLSSRRPVTVDKHWYSGETVVKYAMANGDRSVAAMITVTVASEEEGAHV 1007
            IV DP   +AVN+SSRR V VD+HWY+GET+V+YA+  G     A    TV   EE  ++
Sbjct: 174  IVADPRSGRAVNVSSRRAVAVDRHWYTGETLVRYAVVLGGYKFEA----TVTCSEEAGYL 229

Query: 1008 REVSFMLEDEDGICLNGKESLAIIKGAM 1091
            REVS  +ED DG  ++G+ SL ++  AM
Sbjct: 230  REVSLTVEDADGAAVSGEGSLRLLAAAM 257


>ref|XP_002453940.1| hypothetical protein SORBIDRAFT_04g021870 [Sorghum bicolor]
            gi|241933771|gb|EES06916.1| hypothetical protein
            SORBIDRAFT_04g021870 [Sorghum bicolor]
          Length = 313

 Score =  215 bits (547), Expect = 2e-53
 Identities = 117/255 (45%), Positives = 163/255 (63%), Gaps = 2/255 (0%)
 Frame = +3

Query: 333  TTTIEDLHPDLVVHALRLLDGPALAAASCATTHLHSVASHPDVWHDLCLSTWPSLRHHPE 512
            +TT+EDL  D++  ALR LDGP+LAAASCAT  L ++A+ P+ W  LC + WPSL   P+
Sbjct: 10   STTVEDLPADVLACALRRLDGPSLAAASCATAGLRALAADPETWRALCHARWPSLAARPD 69

Query: 513  LLHAIIPSFAGSHRSFFSEAYPFPFLAGQHGDPGNTIKLP--RELLSAVDIYYKGVPILS 686
            LL  +  S A S +  F++A+PFP  A         + +P   EL+SAVD+Y++G P+LS
Sbjct: 70   LL--LSSSSAVSPQRLFADAFPFPCDASS----AELLPVPVTSELVSAVDVYHRGEPLLS 123

Query: 687  RVIETETESQWFNGSPFRVDVLDRKDPDQTIMETPAVVSPGELTLSWIVIDPEGRKAVNL 866
            RV+ET T S WF  SPF VD ++ K      +  PA  +P EL LSW+VIDP   +AVN+
Sbjct: 124  RVVETSTSSSWFLTSPFCVDAVECKS--HAAVAVPAH-APAELELSWVVIDPSSGRAVNV 180

Query: 867  SSRRPVTVDKHWYSGETVVKYAMANGDRSVAAMITVTVASEEEGAHVREVSFMLEDEDGI 1046
            SSRRPV VD+HWY+G+T+V+YA+  G          TV   +E  HVRE+S  +ED DG 
Sbjct: 181  SSRRPVAVDRHWYTGDTLVRYAVVLG----GCKFEATVTCSQETGHVREISLTVEDADGA 236

Query: 1047 CLNGKESLAIIKGAM 1091
             ++G+ +L ++  AM
Sbjct: 237  AVSGEGTLRLLAAAM 251


>ref|NP_001173010.1| Os02g0535901 [Oryza sativa Japonica Group]
            gi|50251878|dbj|BAD27806.1| F-box protein-like [Oryza
            sativa Japonica Group] gi|50253058|dbj|BAD29307.1| F-box
            protein-like [Oryza sativa Japonica Group]
            gi|125539768|gb|EAY86163.1| hypothetical protein
            OsI_07543 [Oryza sativa Indica Group]
            gi|125582393|gb|EAZ23324.1| hypothetical protein
            OsJ_07024 [Oryza sativa Japonica Group]
            gi|255670972|dbj|BAH91739.1| Os02g0535901 [Oryza sativa
            Japonica Group]
          Length = 316

 Score =  214 bits (545), Expect = 4e-53
 Identities = 115/258 (44%), Positives = 158/258 (61%), Gaps = 3/258 (1%)
 Frame = +3

Query: 327  AHTTTIEDLHPDLVVHALRLLDGPALAAASCATTHLHSVASHPDVWHDLCLSTWPSLRHH 506
            A TTT+EDL  D++  ALR LDGP+LAAA CAT+ L ++A  PD W  LCLS WPSL   
Sbjct: 3    ATTTTVEDLPGDVLACALRRLDGPSLAAAGCATSGLRALADDPDTWRALCLSRWPSLAA- 61

Query: 507  PELLHAIIPSFAGSHRSFFSEAYPFPFL---AGQHGDPGNTIKLPRELLSAVDIYYKGVP 677
             E    +  + A S R  F++A+PFP +   A      G+  +LP EL+SAVD+Y+ G  
Sbjct: 62   AEQRCVLSAAGAVSPRRLFADAFPFPCVDDAAAAAPLDGDDQRLPGELVSAVDVYHGGAA 121

Query: 678  ILSRVIETETESQWFNGSPFRVDVLDRKDPDQTIMETPAVVSPGELTLSWIVIDPEGRKA 857
            ++SRV+ET T S WF  SPFRVD ++ K P        +  SP EL LSWI++DP   +A
Sbjct: 122  VVSRVVETSTSSSWFLASPFRVDAVEGKSPAPAPASVASSWSPAELELSWILLDPSTGRA 181

Query: 858  VNLSSRRPVTVDKHWYSGETVVKYAMANGDRSVAAMITVTVASEEEGAHVREVSFMLEDE 1037
            VN+SSRRPV V++HWY+G+T+V+YA+             TV+  EE   + EVS   +D 
Sbjct: 182  VNVSSRRPVAVERHWYTGDTLVRYAVV----LAGCKFEATVSCSEEAGQITEVSLAADDA 237

Query: 1038 DGICLNGKESLAIIKGAM 1091
            DG  ++G+  L ++  AM
Sbjct: 238  DGAAISGEGCLRLLAAAM 255


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