BLASTX nr result

ID: Dioscorea21_contig00000231 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00000231
         (308 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004149568.1| PREDICTED: uncharacterized WD repeat-contain...   128   5e-28
gb|AFK46241.1| unknown [Lotus japonicus]                              124   1e-26
ref|NP_568838.1| transducin/WD40 domain-containing protein [Arab...   123   2e-26
dbj|BAB09301.1| WD-repeat protein-like [Arabidopsis thaliana]         123   2e-26
gb|AFK36155.1| unknown [Medicago truncatula]                          123   2e-26

>ref|XP_004149568.1| PREDICTED: uncharacterized WD repeat-containing protein
           C2A9.03-like [Cucumis sativus]
           gi|449526670|ref|XP_004170336.1| PREDICTED:
           uncharacterized WD repeat-containing protein
           C2A9.03-like [Cucumis sativus]
          Length = 445

 Score =  128 bits (321), Expect = 5e-28
 Identities = 57/69 (82%), Positives = 66/69 (95%)
 Frame = -1

Query: 308 MAEPADFVHVFDVTSEYEKKQELDFFGEISGISFSPDTESLFVGVWDRTYGSLLQYRRRR 129
           MAEPADFVHVFDV S YEK+QE+DFFGEISG+SFSPDTESLF+GVWDRTYGSLL+Y RRR
Sbjct: 377 MAEPADFVHVFDVKSGYEKEQEIDFFGEISGVSFSPDTESLFIGVWDRTYGSLLEYHRRR 436

Query: 128 DYTYLDSMF 102
           +Y+YLDS++
Sbjct: 437 NYSYLDSLY 445


>gb|AFK46241.1| unknown [Lotus japonicus]
          Length = 183

 Score =  124 bits (310), Expect = 1e-26
 Identities = 56/68 (82%), Positives = 65/68 (95%)
 Frame = -1

Query: 308 MAEPADFVHVFDVTSEYEKKQELDFFGEISGISFSPDTESLFVGVWDRTYGSLLQYRRRR 129
           MAEPADFVHV+DV S YE++QE+DFFGEISGISFSPDTESLF+GVWDRTYGSLL+Y RR+
Sbjct: 115 MAEPADFVHVYDVKSGYEREQEIDFFGEISGISFSPDTESLFIGVWDRTYGSLLEYGRRQ 174

Query: 128 DYTYLDSM 105
           +Y+YLDSM
Sbjct: 175 NYSYLDSM 182


>ref|NP_568838.1| transducin/WD40 domain-containing protein [Arabidopsis thaliana]
           gi|332009350|gb|AED96733.1| transducin/WD40
           domain-containing protein [Arabidopsis thaliana]
          Length = 447

 Score =  123 bits (308), Expect = 2e-26
 Identities = 55/68 (80%), Positives = 63/68 (92%)
 Frame = -1

Query: 308 MAEPADFVHVFDVTSEYEKKQELDFFGEISGISFSPDTESLFVGVWDRTYGSLLQYRRRR 129
           MAEPADFVH++D  S Y+K+QE+DFFGEISGISFSPDTESLF+GVWDRTYGSLL+Y R R
Sbjct: 379 MAEPADFVHIYDTKSGYKKEQEIDFFGEISGISFSPDTESLFIGVWDRTYGSLLEYGRTR 438

Query: 128 DYTYLDSM 105
           DYTYLDS+
Sbjct: 439 DYTYLDSL 446


>dbj|BAB09301.1| WD-repeat protein-like [Arabidopsis thaliana]
          Length = 456

 Score =  123 bits (308), Expect = 2e-26
 Identities = 55/68 (80%), Positives = 63/68 (92%)
 Frame = -1

Query: 308 MAEPADFVHVFDVTSEYEKKQELDFFGEISGISFSPDTESLFVGVWDRTYGSLLQYRRRR 129
           MAEPADFVH++D  S Y+K+QE+DFFGEISGISFSPDTESLF+GVWDRTYGSLL+Y R R
Sbjct: 388 MAEPADFVHIYDTKSGYKKEQEIDFFGEISGISFSPDTESLFIGVWDRTYGSLLEYGRTR 447

Query: 128 DYTYLDSM 105
           DYTYLDS+
Sbjct: 448 DYTYLDSL 455


>gb|AFK36155.1| unknown [Medicago truncatula]
          Length = 447

 Score =  123 bits (308), Expect = 2e-26
 Identities = 56/68 (82%), Positives = 64/68 (94%)
 Frame = -1

Query: 308 MAEPADFVHVFDVTSEYEKKQELDFFGEISGISFSPDTESLFVGVWDRTYGSLLQYRRRR 129
           +AEPADFVHV+DV S YEK+QE+DFFGEISGISFSPDTESLF+GVWDRTYGSLL+Y RR 
Sbjct: 379 IAEPADFVHVYDVKSGYEKEQEIDFFGEISGISFSPDTESLFIGVWDRTYGSLLEYGRRH 438

Query: 128 DYTYLDSM 105
           +Y+YLDSM
Sbjct: 439 NYSYLDSM 446


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