BLASTX nr result

ID: Dioscorea21_contig00000215 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00000215
         (1252 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002519286.1| dihydrolipoamide dehydrogenase, putative [Ri...   462   e-128
gb|EEC78570.1| hypothetical protein OsI_18555 [Oryza sativa Indi...   457   e-126
gb|ABO61735.1| mitochondrial lipoamide dehydrogenase [Populus tr...   457   e-126
gb|ABK96408.1| unknown [Populus trichocarpa x Populus deltoides]      457   e-126
ref|XP_002263180.1| PREDICTED: dihydrolipoyl dehydrogenase, mito...   457   e-126

>ref|XP_002519286.1| dihydrolipoamide dehydrogenase, putative [Ricinus communis]
            gi|223541601|gb|EEF43150.1| dihydrolipoamide
            dehydrogenase, putative [Ricinus communis]
          Length = 510

 Score =  462 bits (1190), Expect = e-128
 Identities = 254/370 (68%), Positives = 279/370 (75%), Gaps = 11/370 (2%)
 Frame = +3

Query: 174  MAMASLARRKAMALV-----GIGGSLRYTVAV----RGFAAAAGDENDXXXXXXXXXXXX 326
            MAMAS ARRKA  L          +LRY+ ++    RGFA+A  DEND            
Sbjct: 1    MAMASFARRKAYLLTRNFSNSSPDALRYSFSLTSFSRGFASAGSDENDVVVVGGGPGGYV 60

Query: 327  AAIKAAQLGLKTTCIEKRGTLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 506
            AAIKAAQLGLKTTCIEKRGTL                                       
Sbjct: 61   AAIKAAQLGLKTTCIEKRGTLGGTCLNVGCIPSKALLHSSHMYHEAQHSFANHGVKFSSV 120

Query: 507  XXXXXXX--QKDKAVSGLTRGIEGLFKKNKVTYVKGYGKFVSPSEVSVDTSDGGSTVVKG 680
                     QKDKAV+ LTRGIEGLFKKNKV YVKGYGKF+SPSEVSVDT DGG+TVVKG
Sbjct: 121  EVDLPAMMGQKDKAVANLTRGIEGLFKKNKVNYVKGYGKFISPSEVSVDTLDGGNTVVKG 180

Query: 681  KHIIIATGSDVKSLPGVTIDEKKIVSSTGALALPEIPKKLVVIGAGYIGLEMGSVWGRLG 860
            K+IIIATGSDVKSLPG+TIDEKKIVSSTGALAL EIPKKLVVIGAGYIGLEMGSVWGRLG
Sbjct: 181  KNIIIATGSDVKSLPGITIDEKKIVSSTGALALSEIPKKLVVIGAGYIGLEMGSVWGRLG 240

Query: 861  SEVTVVEFAPDIVPTMDGEVRKQFQRMLEKQKMKFMLKTKVVGVDTSGEGVKLTIEPAAG 1040
            SEVTVVEFAPDIVP+MDGE+RKQFQR LEKQKMKFMLKTKVVGVD+SG+GVKLT+EPA+G
Sbjct: 241  SEVTVVEFAPDIVPSMDGEIRKQFQRSLEKQKMKFMLKTKVVGVDSSGDGVKLTLEPASG 300

Query: 1041 GEQSTLEADVVLVSAGRVPFTDGLGLEKLGVETDKIGRITVDKKFMTNVSGVYAIGDVIP 1220
            G+Q+ LEADVVLVSAGR PFT GLGL+K+GVETDK+GRI V++KF TNV GV+AIGDV+P
Sbjct: 301  GDQTILEADVVLVSAGRTPFTAGLGLDKIGVETDKLGRIPVNEKFATNVPGVFAIGDVVP 360

Query: 1221 GPMLAHKAEE 1250
            GPMLAHKAEE
Sbjct: 361  GPMLAHKAEE 370


>gb|EEC78570.1| hypothetical protein OsI_18555 [Oryza sativa Indica Group]
          Length = 502

 Score =  457 bits (1177), Expect = e-126
 Identities = 255/362 (70%), Positives = 271/362 (74%), Gaps = 3/362 (0%)
 Frame = +3

Query: 174  MAMASLARRKAMALVGIGGSLRYTVAVRGFAAAA-GDENDXXXXXXXXXXXXAAIKAAQL 350
            MAMASLARR+A     +  +     A RG+AAAA G+E+D            AAIKAAQL
Sbjct: 1    MAMASLARRRAAEAALLRRAPAAAWAWRGYAAAAAGEESDVVVIGGGPGGYVAAIKAAQL 60

Query: 351  GLKTTCIEKRGTLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX- 527
            GLKTTCIEKRGTL                                               
Sbjct: 61   GLKTTCIEKRGTLGGTCLNVGCIPSKALLHSSHMYHEAKASFAHHGIKFSNLEIDLPAMM 120

Query: 528  -QKDKAVSGLTRGIEGLFKKNKVTYVKGYGKFVSPSEVSVDTSDGGSTVVKGKHIIIATG 704
             QKDKAV+GLT+GIEGLFKKNKV YVKG+GKFVSPSEVSVD  DGGST VKGK+IIIATG
Sbjct: 121  SQKDKAVAGLTKGIEGLFKKNKVEYVKGFGKFVSPSEVSVDLLDGGSTTVKGKNIIIATG 180

Query: 705  SDVKSLPGVTIDEKKIVSSTGALALPEIPKKLVVIGAGYIGLEMGSVWGRLGSEVTVVEF 884
            SDVKSLPGVTIDEKKIVSSTGALAL EIPKKLVVIGAGYIGLEMGSVW RLGSEVTVVEF
Sbjct: 181  SDVKSLPGVTIDEKKIVSSTGALALSEIPKKLVVIGAGYIGLEMGSVWNRLGSEVTVVEF 240

Query: 885  APDIVPTMDGEVRKQFQRMLEKQKMKFMLKTKVVGVDTSGEGVKLTIEPAAGGEQSTLEA 1064
            A DIVP+MDGE+RKQFQRMLEKQKMKFMLKTKVVGVDTSG GVKLT+EPAAGGEQS LE 
Sbjct: 241  ASDIVPSMDGEIRKQFQRMLEKQKMKFMLKTKVVGVDTSGSGVKLTVEPAAGGEQSVLEC 300

Query: 1065 DVVLVSAGRVPFTDGLGLEKLGVETDKIGRITVDKKFMTNVSGVYAIGDVIPGPMLAHKA 1244
            D+VLVSAGRVP+T GLGL  LGVETDK GRI VDK+FMTNV GVYAIGD IPGPMLAHKA
Sbjct: 301  DIVLVSAGRVPYTSGLGLNALGVETDKGGRILVDKRFMTNVKGVYAIGDAIPGPMLAHKA 360

Query: 1245 EE 1250
            EE
Sbjct: 361  EE 362


>gb|ABO61735.1| mitochondrial lipoamide dehydrogenase [Populus tremuloides]
          Length = 511

 Score =  457 bits (1177), Expect = e-126
 Identities = 253/371 (68%), Positives = 276/371 (74%), Gaps = 12/371 (3%)
 Frame = +3

Query: 174  MAMASLARRKAMALV----------GIGGSLRYTVAVRGFAAAAGDENDXXXXXXXXXXX 323
            MAMAS+ARRKA+ L               S   T   RGFA +  +END           
Sbjct: 1    MAMASIARRKALFLTRNLSNSSSADAFKFSYSLTKFSRGFATSGSEENDVVIIGGGPGGY 60

Query: 324  XAAIKAAQLGLKTTCIEKRGTLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 503
             AAIKAAQLGLKTTCIEKRGTL                                      
Sbjct: 61   VAAIKAAQLGLKTTCIEKRGTLGGTCLNVGCIPSKALLHSSHMFHEAQHSFASHGVKFSS 120

Query: 504  XXXXXXXX--QKDKAVSGLTRGIEGLFKKNKVTYVKGYGKFVSPSEVSVDTSDGGSTVVK 677
                      QKDKAVS LTRGIEGL KKNKV YVKGYGKF+SPSEVSVDT DG +TVVK
Sbjct: 121  VEVDLPAMMAQKDKAVSTLTRGIEGLLKKNKVNYVKGYGKFISPSEVSVDTVDGANTVVK 180

Query: 678  GKHIIIATGSDVKSLPGVTIDEKKIVSSTGALALPEIPKKLVVIGAGYIGLEMGSVWGRL 857
            GK+IIIATGSDVKSLPG+TIDE+KIVSSTGALAL +IPKKLVVIGAGYIGLEMGSVW RL
Sbjct: 181  GKNIIIATGSDVKSLPGITIDEEKIVSSTGALALKKIPKKLVVIGAGYIGLEMGSVWRRL 240

Query: 858  GSEVTVVEFAPDIVPTMDGEVRKQFQRMLEKQKMKFMLKTKVVGVDTSGEGVKLTIEPAA 1037
            GSEVTVVEFAPDIVP+MDGEVRKQFQRMLEKQKMKFMLKTKVVGVDTSG+GVKLT+EPA+
Sbjct: 241  GSEVTVVEFAPDIVPSMDGEVRKQFQRMLEKQKMKFMLKTKVVGVDTSGDGVKLTLEPAS 300

Query: 1038 GGEQSTLEADVVLVSAGRVPFTDGLGLEKLGVETDKIGRITVDKKFMTNVSGVYAIGDVI 1217
            GG+Q+TLEADVVLVSAGR PFT GLGL+K+GVETDK+GRI+V+++F TNVSGVYAIGDVI
Sbjct: 301  GGDQTTLEADVVLVSAGRTPFTAGLGLDKIGVETDKVGRISVNERFATNVSGVYAIGDVI 360

Query: 1218 PGPMLAHKAEE 1250
            PGPMLAHKAEE
Sbjct: 361  PGPMLAHKAEE 371


>gb|ABK96408.1| unknown [Populus trichocarpa x Populus deltoides]
          Length = 511

 Score =  457 bits (1177), Expect = e-126
 Identities = 254/371 (68%), Positives = 274/371 (73%), Gaps = 12/371 (3%)
 Frame = +3

Query: 174  MAMASLARRKAMALV----------GIGGSLRYTVAVRGFAAAAGDENDXXXXXXXXXXX 323
            MAMAS+ARRKA  L               S   T   RGFA +  +END           
Sbjct: 1    MAMASIARRKACFLTRNLSNSSSADAFKFSYSLTKFSRGFATSGSEENDVVVIGGGPGGY 60

Query: 324  XAAIKAAQLGLKTTCIEKRGTLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 503
             AAIKAAQLGLKTTCIEKRGTL                                      
Sbjct: 61   VAAIKAAQLGLKTTCIEKRGTLGGTCLNVGCIPSKALLHSSHMFHEAQHSFASHGVKFSS 120

Query: 504  XXXXXXXX--QKDKAVSGLTRGIEGLFKKNKVTYVKGYGKFVSPSEVSVDTSDGGSTVVK 677
                      QKDKAVS LTRGIEGL KKNKV YVKGYGKF+SPSEVSVDT DG +TVVK
Sbjct: 121  VEVDLPAMMAQKDKAVSTLTRGIEGLLKKNKVNYVKGYGKFISPSEVSVDTIDGANTVVK 180

Query: 678  GKHIIIATGSDVKSLPGVTIDEKKIVSSTGALALPEIPKKLVVIGAGYIGLEMGSVWGRL 857
            GK+IIIATGSDVKSLPG+TIDE+KIVSSTGALAL +IPKKLVVIGAGYIGLEMGSVW RL
Sbjct: 181  GKNIIIATGSDVKSLPGITIDEEKIVSSTGALALKKIPKKLVVIGAGYIGLEMGSVWRRL 240

Query: 858  GSEVTVVEFAPDIVPTMDGEVRKQFQRMLEKQKMKFMLKTKVVGVDTSGEGVKLTIEPAA 1037
            GSEVTVVEFAPDIVP+MDGEVRKQFQRMLEKQKMKFMLKTKVVGVDTSG+GVKLT+EPA+
Sbjct: 241  GSEVTVVEFAPDIVPSMDGEVRKQFQRMLEKQKMKFMLKTKVVGVDTSGDGVKLTLEPAS 300

Query: 1038 GGEQSTLEADVVLVSAGRVPFTDGLGLEKLGVETDKIGRITVDKKFMTNVSGVYAIGDVI 1217
            GG+Q+TLEADVVLVSAGR PFT GLGL+K+GVETDK+GRI VD++F TNVSGVYAIGDVI
Sbjct: 301  GGDQTTLEADVVLVSAGRTPFTAGLGLDKIGVETDKVGRIPVDERFATNVSGVYAIGDVI 360

Query: 1218 PGPMLAHKAEE 1250
            PGPMLAHKAEE
Sbjct: 361  PGPMLAHKAEE 371


>ref|XP_002263180.1| PREDICTED: dihydrolipoyl dehydrogenase, mitochondrial [Vitis
            vinifera]
          Length = 502

 Score =  457 bits (1175), Expect = e-126
 Identities = 252/365 (69%), Positives = 275/365 (75%), Gaps = 6/365 (1%)
 Frame = +3

Query: 174  MAMASLARRKAMALVGIGGSLRYTVAV----RGFAAAAGDENDXXXXXXXXXXXXAAIKA 341
            MAMA   R K +   G+   LRY++++    RGFA+A  DEND            AAIKA
Sbjct: 1    MAMALARRSKNLYSCGV---LRYSLSLTSFSRGFASAGSDENDVVVIGGGPGGYVAAIKA 57

Query: 342  AQLGLKTTCIEKRGTLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 521
            AQLGLKTTCIEKRGTL                                            
Sbjct: 58   AQLGLKTTCIEKRGTLGGTCLNVGCIPSKALLHSSHMYHEAKHSFASHGVKFPSVEVDLP 117

Query: 522  XX--QKDKAVSGLTRGIEGLFKKNKVTYVKGYGKFVSPSEVSVDTSDGGSTVVKGKHIII 695
                QKDKAV+ LTRGIEGLFKKNKV YVKGYGKF+SPSEVSVDT +GG+ VVKGK+III
Sbjct: 118  AMMGQKDKAVANLTRGIEGLFKKNKVNYVKGYGKFISPSEVSVDTIEGGNAVVKGKNIII 177

Query: 696  ATGSDVKSLPGVTIDEKKIVSSTGALALPEIPKKLVVIGAGYIGLEMGSVWGRLGSEVTV 875
            ATGSDVKSLPG+TIDEK+IVSSTGALAL EIPKKLVV+GAGYIGLEMGSVW RLGSEVTV
Sbjct: 178  ATGSDVKSLPGITIDEKRIVSSTGALALSEIPKKLVVVGAGYIGLEMGSVWARLGSEVTV 237

Query: 876  VEFAPDIVPTMDGEVRKQFQRMLEKQKMKFMLKTKVVGVDTSGEGVKLTIEPAAGGEQST 1055
            VEFAPDIVPTMDGE+RKQFQR LEKQKMKFM+KTKV GVDTSG+ VKLT+EPAAGGEQST
Sbjct: 238  VEFAPDIVPTMDGEIRKQFQRALEKQKMKFMVKTKVAGVDTSGDLVKLTLEPAAGGEQST 297

Query: 1056 LEADVVLVSAGRVPFTDGLGLEKLGVETDKIGRITVDKKFMTNVSGVYAIGDVIPGPMLA 1235
            LEADVVLVSAGR PFT GLGL+K+GVETDKIGRI V++KF TNVSGVYAIGDVIPGPMLA
Sbjct: 298  LEADVVLVSAGRSPFTAGLGLDKIGVETDKIGRILVNEKFSTNVSGVYAIGDVIPGPMLA 357

Query: 1236 HKAEE 1250
            HKAEE
Sbjct: 358  HKAEE 362


Top