BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00000214
         (429 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002532240.1| 30S ribosomal protein S20, putative [Ricinus...   144   6e-33
ref|XP_002285149.1| PREDICTED: 30S ribosomal protein S20, chloro...   142   2e-32
ref|XP_004146049.1| PREDICTED: 30S ribosomal protein S20, chloro...   141   6e-32
gb|AFK46331.1| unknown [Lotus japonicus] gi|388517753|gb|AFK4693...   141   6e-32
ref|NP_188137.1| 30S ribosomal protein S20 [Arabidopsis thaliana...   139   3e-31

>ref|XP_002532240.1| 30S ribosomal protein S20, putative [Ricinus communis]
           gi|223528058|gb|EEF30134.1| 30S ribosomal protein S20,
           putative [Ricinus communis]
          Length = 185

 Score =  144 bits (364), Expect = 6e-33
 Identities = 77/119 (64%), Positives = 91/119 (76%)
 Frame = -2

Query: 359 LAFSYSVSPISFPRGTGLMERMGERGRNPVRRLVVCEVAPKKKADSAMKRARQAEKRRIY 180
           L+FS ++S   F +G   M  +    + P+   +VCE APKK+ADSA KRARQAEKRRIY
Sbjct: 38  LSFSSAISHDVFNKGCLSMSIV----KRPIGHSIVCEAAPKKRADSAAKRARQAEKRRIY 93

Query: 179 NKAKKSEAKTRMRKVFEELDALRKKSDAQSEEILPIEKLIAEAYSAIDKAVKAGALHRN 3
           +KA KSE +TRM+KV E LD LRKKSDAQ+EE+LPIEKLIAEAYS IDKAVK G LHRN
Sbjct: 94  HKAHKSEVRTRMKKVLEALDDLRKKSDAQAEEVLPIEKLIAEAYSVIDKAVKVGTLHRN 152


>ref|XP_002285149.1| PREDICTED: 30S ribosomal protein S20, chloroplastic [Vitis
           vinifera] gi|302142967|emb|CBI20262.3| unnamed protein
           product [Vitis vinifera]
          Length = 183

 Score =  142 bits (359), Expect = 2e-32
 Identities = 74/119 (62%), Positives = 88/119 (73%)
 Frame = -2

Query: 359 LAFSYSVSPISFPRGTGLMERMGERGRNPVRRLVVCEVAPKKKADSAMKRARQAEKRRIY 180
           L FS ++S   F +G   +  +    R P    +VC+ AP +KADSA KR RQAEKRRIY
Sbjct: 38  LGFSSNLSQTVFSKGRLSISTI----RGPTHHSIVCDAAPMRKADSAAKRVRQAEKRRIY 93

Query: 179 NKAKKSEAKTRMRKVFEELDALRKKSDAQSEEILPIEKLIAEAYSAIDKAVKAGALHRN 3
           NKA+KSE +TRM+KV EELD L+KK DAQ+EE+LPIEKLIAEAYS IDKAVK G LHRN
Sbjct: 94  NKARKSEIRTRMKKVLEELDGLKKKPDAQAEEVLPIEKLIAEAYSVIDKAVKVGTLHRN 152


>ref|XP_004146049.1| PREDICTED: 30S ribosomal protein S20, chloroplastic-like [Cucumis
           sativus] gi|449507080|ref|XP_004162928.1| PREDICTED: 30S
           ribosomal protein S20, chloroplastic-like [Cucumis
           sativus]
          Length = 184

 Score =  141 bits (355), Expect = 6e-32
 Identities = 79/119 (66%), Positives = 90/119 (75%)
 Frame = -2

Query: 359 LAFSYSVSPISFPRGTGLMERMGERGRNPVRRLVVCEVAPKKKADSAMKRARQAEKRRIY 180
           L+FS ++S  +F  G  L  R  ER     R  VVCE APK K DSA KRARQAEKRRIY
Sbjct: 39  LSFSSNISLSAFSNGC-LSMRKTERLH---RYSVVCEAAPKSKVDSAAKRARQAEKRRIY 94

Query: 179 NKAKKSEAKTRMRKVFEELDALRKKSDAQSEEILPIEKLIAEAYSAIDKAVKAGALHRN 3
           NKA+KSE KTRM+KV E LD L+KK++AQSEE+LPIE LIAEAYS IDKAV+AG LHRN
Sbjct: 95  NKARKSEIKTRMKKVLEALDGLKKKAEAQSEEVLPIETLIAEAYSVIDKAVRAGTLHRN 153


>gb|AFK46331.1| unknown [Lotus japonicus] gi|388517753|gb|AFK46938.1| unknown
           [Lotus japonicus]
          Length = 177

 Score =  141 bits (355), Expect = 6e-32
 Identities = 80/135 (59%), Positives = 92/135 (68%), Gaps = 9/135 (6%)
 Frame = -2

Query: 380 PKTFKSLLAFSYSVSPISFPRGTGLMERM-------GERGRNPVRR--LVVCEVAPKKKA 228
           P  F+ L   S S S IS          +       G    +PV+R  LVVCEV  KKK 
Sbjct: 12  PSKFRDLSPASSSSSSISNSASLSFCRNISHTVFSQGSLSLSPVQRRTLVVCEVVTKKKV 71

Query: 227 DSAMKRARQAEKRRIYNKAKKSEAKTRMRKVFEELDALRKKSDAQSEEILPIEKLIAEAY 48
           DSA+KRARQAEKRRIYNKA+KSE KTRM+KV E L++L+KKSDAQ EEILPIEKLI EAY
Sbjct: 72  DSAIKRARQAEKRRIYNKARKSEIKTRMKKVLEALESLKKKSDAQPEEILPIEKLIGEAY 131

Query: 47  SAIDKAVKAGALHRN 3
           S IDKA++ G LHRN
Sbjct: 132 SVIDKAIRVGTLHRN 146


>ref|NP_188137.1| 30S ribosomal protein S20 [Arabidopsis thaliana]
           gi|75308015|sp|Q9ASV6.1|RR20_ARATH RecName: Full=30S
           ribosomal protein S20, chloroplastic; Flags: Precursor
           gi|188036221|pdb|3BBN|T Chain T, Homology Model For The
           Spinach Chloroplast 30s Subunit Fitted To 9.4a Cryo-Em
           Map Of The 70s Chlororibosome.
           gi|13605653|gb|AAK32820.1|AF361807_1 AT3g15190/F4B12_10
           [Arabidopsis thaliana]
           gi|13899121|gb|AAK48982.1|AF370555_1 Unknown protein
           [Arabidopsis thaliana] gi|15777889|gb|AAL05905.1|
           AT3g15190/F4B12_10 [Arabidopsis thaliana]
           gi|18377542|gb|AAL66937.1| unknown protein [Arabidopsis
           thaliana] gi|21592469|gb|AAM64420.1| 30S ribosomal
           protein S20 [Arabidopsis thaliana]
           gi|332642109|gb|AEE75630.1| 30S ribosomal protein S20
           [Arabidopsis thaliana]
          Length = 202

 Score =  139 bits (349), Expect = 3e-31
 Identities = 76/126 (60%), Positives = 97/126 (76%), Gaps = 2/126 (1%)
 Frame = -2

Query: 374 TFKSLLAFSYSVSP-ISFPRGTGLMERMGERGRNPVRRLVVCEVA-PKKKADSAMKRARQ 201
           T  S L+FS SVS  ++F  G   +++       P+R+L+VCE A P KKADSA KRARQ
Sbjct: 44  TLSSSLSFSQSVSQCVAFSTGNLWVQK-------PMRQLIVCEAAAPTKKADSAAKRARQ 96

Query: 200 AEKRRIYNKAKKSEAKTRMRKVFEELDALRKKSDAQSEEILPIEKLIAEAYSAIDKAVKA 21
           AEKRR+YNK+KKSEA+TRM+KV E L+ L+KK+DAQ++EI+ +EKLI EAYSAIDKAVK 
Sbjct: 97  AEKRRVYNKSKKSEARTRMKKVLEALEGLKKKTDAQADEIVTVEKLIGEAYSAIDKAVKV 156

Query: 20  GALHRN 3
            ALH+N
Sbjct: 157 KALHKN 162