BLASTX nr result

ID: Dioscorea21_contig00000162 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00000162
         (677 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAT12490.1| Skp1/Ask1-like protein [Zantedeschia hybrid culti...   193   2e-47
gb|AAC63273.1| SKP1-like protein [Nicotiana clevelandii]              192   7e-47
gb|ACF06501.1| SKP1 [Elaeis guineensis]                               192   7e-47
ref|XP_004143010.1| PREDICTED: SKP1-like protein 1B-like [Cucumi...   191   9e-47
ref|XP_003517160.1| PREDICTED: SKP1-like protein 1A-like [Glycin...   191   1e-46

>gb|AAT12490.1| Skp1/Ask1-like protein [Zantedeschia hybrid cultivar]
          Length = 167

 Score =  193 bits (491), Expect = 2e-47
 Identities = 107/182 (58%), Positives = 119/182 (65%), Gaps = 2/182 (1%)
 Frame = +2

Query: 83  MASTAIEGGAKRMIVLKSSDGELFEVEEAVAMESQTIKHMIXXXXXXXXXXXXXXXXXXX 262
           MA+ A   GA + + LKSSDGE+FEVEE VAMESQTI+++I                   
Sbjct: 1   MAADAAAAGASKKLTLKSSDGEVFEVEETVAMESQTIRNLIEDDCTADGVPLPNVTGRIL 60

Query: 263 XXXXXXXXXXXXXXXXKVIEYCKRHVESVVKGAAE--DKTVDEDLKLWDADFVKVDQATL 436
                           KVIE+CK+HVE     A E  D+  DE+LK+WDADFVKVDQ TL
Sbjct: 61  A---------------KVIEFCKKHVEIAALKADEGVDRAADEELKVWDADFVKVDQTTL 105

Query: 437 FDLILAANYLNIKSLLDLTCQTVADMIKGKTPEEIRKTFNIKNDFTPXXXXXXXXXNQWA 616
           FDLILAANYLNIKSLLDLTCQTVADMIKGKTPEEIRKTFNIKNDFTP         NQWA
Sbjct: 106 FDLILAANYLNIKSLLDLTCQTVADMIKGKTPEEIRKTFNIKNDFTPEEEEEVRRENQWA 165

Query: 617 FE 622
           FE
Sbjct: 166 FE 167


>gb|AAC63273.1| SKP1-like protein [Nicotiana clevelandii]
          Length = 153

 Score =  192 bits (487), Expect = 7e-47
 Identities = 106/169 (62%), Positives = 116/169 (68%)
 Frame = +2

Query: 116 RMIVLKSSDGELFEVEEAVAMESQTIKHMIXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 295
           +MIVL+SSDGE FEVEE+VA+ESQTIKHMI                              
Sbjct: 2   KMIVLRSSDGETFEVEESVALESQTIKHMIEDDCADTSIPLPNVTSKILA---------- 51

Query: 296 XXXXXKVIEYCKRHVESVVKGAAEDKTVDEDLKLWDADFVKVDQATLFDLILAANYLNIK 475
                KVIEYCKRHV++  K   EDK V++DLK +DADFVKVDQ+TLFDLILAANYLNIK
Sbjct: 52  -----KVIEYCKRHVDAASK--TEDKAVEDDLKAFDADFVKVDQSTLFDLILAANYLNIK 104

Query: 476 SLLDLTCQTVADMIKGKTPEEIRKTFNIKNDFTPXXXXXXXXXNQWAFE 622
           SLLDLTCQTVADMIKGKTPEEIRKTFNIKNDFTP         N WAFE
Sbjct: 105 SLLDLTCQTVADMIKGKTPEEIRKTFNIKNDFTPEEEEEVRRENAWAFE 153


>gb|ACF06501.1| SKP1 [Elaeis guineensis]
          Length = 163

 Score =  192 bits (487), Expect = 7e-47
 Identities = 108/177 (61%), Positives = 116/177 (65%), Gaps = 6/177 (3%)
 Frame = +2

Query: 110 AKRMIVLKSSDGELFEVEEAVAMESQTIKHMIXXXXXXXXXXXXXXXXXXXXXXXXXXXX 289
           A++ I LKSSDGE+FEVEE VAMESQTIKHMI                            
Sbjct: 2   AEKKITLKSSDGEVFEVEETVAMESQTIKHMIEDDCAGNGIPLPNVTSKILS-------- 53

Query: 290 XXXXXXXKVIEYCKRHVESVV---KGAAED---KTVDEDLKLWDADFVKVDQATLFDLIL 451
                  KVIEYCK+HV++     K   +D   K VDE+LK WDADFVKVDQATLFDLIL
Sbjct: 54  -------KVIEYCKKHVDAAAASSKSTVDDTSSKIVDEELKTWDADFVKVDQATLFDLIL 106

Query: 452 AANYLNIKSLLDLTCQTVADMIKGKTPEEIRKTFNIKNDFTPXXXXXXXXXNQWAFE 622
           AANYLNIK LLDLTCQTVADMIKGKTPEEIRKTFNIKNDFTP         NQWAFE
Sbjct: 107 AANYLNIKGLLDLTCQTVADMIKGKTPEEIRKTFNIKNDFTPEEEEEVRRENQWAFE 163


>ref|XP_004143010.1| PREDICTED: SKP1-like protein 1B-like [Cucumis sativus]
           gi|449500366|ref|XP_004161077.1| PREDICTED: SKP1-like
           protein 1B-like [Cucumis sativus]
          Length = 157

 Score =  191 bits (486), Expect = 9e-47
 Identities = 108/171 (63%), Positives = 116/171 (67%), Gaps = 2/171 (1%)
 Frame = +2

Query: 116 RMIVLKSSDGELFEVEEAVAMESQTIKHMIXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 295
           R I LKSSDGE+FEV+EAVA+ESQTIKHMI                              
Sbjct: 5   RKITLKSSDGEIFEVDEAVALESQTIKHMIEDDCADSGIPLPNVNSKILS---------- 54

Query: 296 XXXXXKVIEYCKRHVESVVKGAAEDKT--VDEDLKLWDADFVKVDQATLFDLILAANYLN 469
                KVIEYCK+HVES      ED+T  VD+DLK WD++FVKVDQATLFDLILAANYLN
Sbjct: 55  -----KVIEYCKKHVESP---KPEDRTGSVDDDLKTWDSEFVKVDQATLFDLILAANYLN 106

Query: 470 IKSLLDLTCQTVADMIKGKTPEEIRKTFNIKNDFTPXXXXXXXXXNQWAFE 622
           IKSLLDLTCQTVADMIKGKTPEEIRKTFNIKNDFTP         NQWAFE
Sbjct: 107 IKSLLDLTCQTVADMIKGKTPEEIRKTFNIKNDFTPEEEEEVRRENQWAFE 157


>ref|XP_003517160.1| PREDICTED: SKP1-like protein 1A-like [Glycine max]
          Length = 155

 Score =  191 bits (485), Expect = 1e-46
 Identities = 106/169 (62%), Positives = 113/169 (66%)
 Frame = +2

Query: 116 RMIVLKSSDGELFEVEEAVAMESQTIKHMIXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 295
           + I LKSSDGE FEV+EAVA+ESQTIKHMI                              
Sbjct: 5   KKITLKSSDGEAFEVDEAVALESQTIKHMIEDDCADSGIPLPNVTSKILA---------- 54

Query: 296 XXXXXKVIEYCKRHVESVVKGAAEDKTVDEDLKLWDADFVKVDQATLFDLILAANYLNIK 475
                KVIEYCK+HVE+      EDK  ++DLK WDADFVKVDQATLFDLILAANYLNIK
Sbjct: 55  -----KVIEYCKKHVEAA---NPEDKPSEDDLKAWDADFVKVDQATLFDLILAANYLNIK 106

Query: 476 SLLDLTCQTVADMIKGKTPEEIRKTFNIKNDFTPXXXXXXXXXNQWAFE 622
           SLLDLTCQTVADMIKGKTPEEIRKTFNIKNDFTP         NQWAFE
Sbjct: 107 SLLDLTCQTVADMIKGKTPEEIRKTFNIKNDFTPEEEEEVRRENQWAFE 155


Top