BLASTX nr result

ID: Dioscorea21_contig00000160 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00000160
         (1475 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003533168.1| PREDICTED: ubiquitin-conjugating enzyme E2 3...   253   1e-64
ref|XP_004134243.1| PREDICTED: ubiquitin-conjugating enzyme E2 3...   252   2e-64
ref|XP_003609763.1| Ubiquitin carrier protein E2 [Medicago trunc...   252   2e-64
gb|AFK49554.1| unknown [Medicago truncatula]                          251   3e-64
ref|XP_003546320.1| PREDICTED: ubiquitin-conjugating enzyme E2 3...   251   3e-64

>ref|XP_003533168.1| PREDICTED: ubiquitin-conjugating enzyme E2 32-like [Glycine max]
          Length = 308

 Score =  253 bits (645), Expect = 1e-64
 Identities = 117/129 (90%), Positives = 125/129 (96%)
 Frame = -2

Query: 1474 ENIFEWQFAICGPRDSEFEGGIYHGRIQLPAEYPFKPPAFMLLTPNGRFETQTKICLSIS 1295
            ENIFEWQFAI GPRD+EFEGGIYHGRIQLP+EYPFKPP+FMLLTPNGRFETQTKICLSIS
Sbjct: 37   ENIFEWQFAIRGPRDTEFEGGIYHGRIQLPSEYPFKPPSFMLLTPNGRFETQTKICLSIS 96

Query: 1294 NYHPEHWQPSWSVRTALVALIAFMPTNPDGALGSLDYKKEERRKLAIKSREAAPKYGSPE 1115
            N+HPEHWQPSWSVRTALVALIAFMPTNP+GALGSLDYKKEERR LA+KSREA PK+G+PE
Sbjct: 97   NHHPEHWQPSWSVRTALVALIAFMPTNPNGALGSLDYKKEERRTLAVKSREAPPKFGTPE 156

Query: 1114 RQNLIDEIH 1088
            RQ LIDEIH
Sbjct: 157  RQKLIDEIH 165


>ref|XP_004134243.1| PREDICTED: ubiquitin-conjugating enzyme E2 32-like [Cucumis sativus]
            gi|449503860|ref|XP_004162210.1| PREDICTED:
            ubiquitin-conjugating enzyme E2 32-like [Cucumis sativus]
          Length = 297

 Score =  252 bits (644), Expect = 2e-64
 Identities = 119/129 (92%), Positives = 124/129 (96%)
 Frame = -2

Query: 1474 ENIFEWQFAICGPRDSEFEGGIYHGRIQLPAEYPFKPPAFMLLTPNGRFETQTKICLSIS 1295
            ENIFEWQFAI GP DSEFEGGIYHGRIQLPAEYPFKPP+FMLLTPNGRFETQTKICLSIS
Sbjct: 38   ENIFEWQFAIRGPGDSEFEGGIYHGRIQLPAEYPFKPPSFMLLTPNGRFETQTKICLSIS 97

Query: 1294 NYHPEHWQPSWSVRTALVALIAFMPTNPDGALGSLDYKKEERRKLAIKSREAAPKYGSPE 1115
            N+HPEHWQPSWSVRTALVALIAFMPTNP+GALGSLDYKKEERR LAIKSREA PK+G+PE
Sbjct: 98   NHHPEHWQPSWSVRTALVALIAFMPTNPNGALGSLDYKKEERRVLAIKSREAPPKFGTPE 157

Query: 1114 RQNLIDEIH 1088
            RQ LIDEIH
Sbjct: 158  RQKLIDEIH 166


>ref|XP_003609763.1| Ubiquitin carrier protein E2 [Medicago truncatula]
            gi|355510818|gb|AES91960.1| Ubiquitin carrier protein E2
            [Medicago truncatula]
          Length = 307

 Score =  252 bits (644), Expect = 2e-64
 Identities = 117/129 (90%), Positives = 126/129 (97%)
 Frame = -2

Query: 1474 ENIFEWQFAICGPRDSEFEGGIYHGRIQLPAEYPFKPPAFMLLTPNGRFETQTKICLSIS 1295
            ENIFEWQFAI GPR++EFEGGIYHGRIQLPAEYPFKPP+FMLLTPNGRFETQTKICLSIS
Sbjct: 37   ENIFEWQFAIRGPRETEFEGGIYHGRIQLPAEYPFKPPSFMLLTPNGRFETQTKICLSIS 96

Query: 1294 NYHPEHWQPSWSVRTALVALIAFMPTNPDGALGSLDYKKEERRKLAIKSREAAPKYGSPE 1115
            N+HPEHWQPSWSVRTALVALIAFMPTNP+GALGSLDYKKE+RR LAIKSREA+PK+G+PE
Sbjct: 97   NHHPEHWQPSWSVRTALVALIAFMPTNPNGALGSLDYKKEDRRALAIKSREASPKFGTPE 156

Query: 1114 RQNLIDEIH 1088
            RQ LIDEIH
Sbjct: 157  RQKLIDEIH 165


>gb|AFK49554.1| unknown [Medicago truncatula]
          Length = 307

 Score =  251 bits (642), Expect = 3e-64
 Identities = 117/129 (90%), Positives = 125/129 (96%)
 Frame = -2

Query: 1474 ENIFEWQFAICGPRDSEFEGGIYHGRIQLPAEYPFKPPAFMLLTPNGRFETQTKICLSIS 1295
            ENIFEWQFAI GPR++EFEGGIYHGRIQLPAEYPFKPP FMLLTPNGRFETQTKICLSIS
Sbjct: 37   ENIFEWQFAIRGPRETEFEGGIYHGRIQLPAEYPFKPPLFMLLTPNGRFETQTKICLSIS 96

Query: 1294 NYHPEHWQPSWSVRTALVALIAFMPTNPDGALGSLDYKKEERRKLAIKSREAAPKYGSPE 1115
            N+HPEHWQPSWSVRTALVALIAFMPTNP+GALGSLDYKKE+RR LAIKSREA+PK+G+PE
Sbjct: 97   NHHPEHWQPSWSVRTALVALIAFMPTNPNGALGSLDYKKEDRRALAIKSREASPKFGTPE 156

Query: 1114 RQNLIDEIH 1088
            RQ LIDEIH
Sbjct: 157  RQKLIDEIH 165


>ref|XP_003546320.1| PREDICTED: ubiquitin-conjugating enzyme E2 32-like [Glycine max]
          Length = 306

 Score =  251 bits (641), Expect = 3e-64
 Identities = 117/129 (90%), Positives = 124/129 (96%)
 Frame = -2

Query: 1474 ENIFEWQFAICGPRDSEFEGGIYHGRIQLPAEYPFKPPAFMLLTPNGRFETQTKICLSIS 1295
            ENIFEWQFAI GPRD+EFEGGIYHGRIQLP+EYPFKPP+FMLLTPNGRFETQTKICLSIS
Sbjct: 37   ENIFEWQFAIRGPRDTEFEGGIYHGRIQLPSEYPFKPPSFMLLTPNGRFETQTKICLSIS 96

Query: 1294 NYHPEHWQPSWSVRTALVALIAFMPTNPDGALGSLDYKKEERRKLAIKSREAAPKYGSPE 1115
            N+HPEHWQPSWSVRTALVALIAFMPTNP+GALGSLDYKKEER  LAIKSREA PK+G+PE
Sbjct: 97   NHHPEHWQPSWSVRTALVALIAFMPTNPNGALGSLDYKKEERHTLAIKSREAPPKFGTPE 156

Query: 1114 RQNLIDEIH 1088
            RQ LIDEIH
Sbjct: 157  RQKLIDEIH 165


Top