BLASTX nr result
ID: Dioscorea21_contig00000143
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Dioscorea21_contig00000143
(1715 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
dbj|BAA36278.1| polyprotein [Japanese yam mosaic virus] 1103 0.0
dbj|BAI60051.1| polyprotein [Japanese yam mosaic virus] 1093 0.0
ref|NP_051161.1| polyprotein [Japanese yam mosaic virus] gi|6277... 1087 0.0
dbj|BAF31156.1| polyprotein [Turnip mosaic virus] 840 0.0
dbj|BAF31166.1| polyprotein [Turnip mosaic virus] 839 0.0
>dbj|BAA36278.1| polyprotein [Japanese yam mosaic virus]
Length = 3130
Score = 1103 bits (2854), Expect = 0.0
Identities = 537/571 (94%), Positives = 554/571 (97%)
Frame = -2
Query: 1714 WDKLLTELPDNWIHCDADGSQFDSSLSPYLINAVLNIRLHFMESWDIGEQMLRNLYTEIV 1535
W++LLT+LPD W+HCDADGSQFDSSLSPYLINAVLNIRLHFMESWDIGEQMLRNLYTEIV
Sbjct: 2553 WNELLTKLPDKWVHCDADGSQFDSSLSPYLINAVLNIRLHFMESWDIGEQMLRNLYTEIV 2612
Query: 1534 YTPIATPDGTIVKKFKGNNSGQPSTVVDNTLMVLLALKYSLLKDGIKAEMHKQIIRYFVN 1355
YTPIATPDGTIVKKFKGNNSGQPSTVVDNTLM LLALKYSLLKDG+ AE HK II+YFVN
Sbjct: 2613 YTPIATPDGTIVKKFKGNNSGQPSTVVDNTLMALLALKYSLLKDGVNAETHKDIIKYFVN 2672
Query: 1354 GDDLLISVDPEHESLLDTMQGNFKELGLKYDFNSRTKDKSELWFMSHQGKRIENMWIPKL 1175
GDDLLISVDP +ESLLDTMQ NFKELGLKYDFNSRTKDKSELWFMSHQGKR+EN+WIPKL
Sbjct: 2673 GDDLLISVDPSYESLLDTMQENFKELGLKYDFNSRTKDKSELWFMSHQGKRVENIWIPKL 2732
Query: 1174 EQERIVSILEWDRSKEPSNRMEAICAAMIESWGHIELTHQIRRFYAWLIGQAPYSGLAEI 995
EQERIVSILEWDRSKEPSNR EAICAAMIESWGH+ELTHQIRRFYAWLIGQAPYSGLAEI
Sbjct: 2733 EQERIVSILEWDRSKEPSNRTEAICAAMIESWGHVELTHQIRRFYAWLIGQAPYSGLAEI 2792
Query: 994 GKAPYIAESALRKLYLDKDADQSAIEIYLRAIFEDYATEPEDLFVYHQSGEDTLDAGAST 815
GKAPYIAESALRKLYLDKDADQSAIEIYL+AIFEDY EPEDLFVYHQSGEDTLDAG S
Sbjct: 2793 GKAPYIAESALRKLYLDKDADQSAIEIYLKAIFEDYTAEPEDLFVYHQSGEDTLDAGTSD 2852
Query: 814 QSKSKKQEGPRPTQGESPSTEGFEPADDPTGKGKQQTVISLEKDVNIGTMGTFAVPRLKG 635
SKSKKQE P+ QGESP+TEGFEPADDPT KGKQQTVI+LEKDVN+GTMGTFAVPRLKG
Sbjct: 2853 PSKSKKQEVPKSAQGESPTTEGFEPADDPTRKGKQQTVINLEKDVNVGTMGTFAVPRLKG 2912
Query: 634 LATKMNMPRVRGKAAMNLDHLLLYNPEQVDLANTRATRKQFDTWYDGVKRDYELDDSSMQ 455
LATKMNMPRVRGKAAMNLDHLLLYNPEQVDLANTRATRKQFDTWYDGVKRDYELDDSSMQ
Sbjct: 2913 LATKMNMPRVRGKAAMNLDHLLLYNPEQVDLANTRATRKQFDTWYDGVKRDYELDDSSMQ 2972
Query: 454 ILLNGLMVWCIENGTSPNINGMWVMMDGEEQIEYPIKPLIDHAKPTFRQIMAHFSNVAEA 275
I+LNGLMVWCIENGTSPNINGMWVMMDGEEQIEYPIKPLIDHAKPTFRQIMAHFSNVAEA
Sbjct: 2973 IILNGLMVWCIENGTSPNINGMWVMMDGEEQIEYPIKPLIDHAKPTFRQIMAHFSNVAEA 3032
Query: 274 YIEKRNQEKAYMPRYGLQRNLTDMSLARYAFDFYEVTSKTPARAREAHIQMKAAALRGVQ 95
YIEKRNQE+AYMPRYGLQRNLTDMSLARYAFDFYEVTSKTPARAREAHIQMKAAALRGVQ
Sbjct: 3033 YIEKRNQERAYMPRYGLQRNLTDMSLARYAFDFYEVTSKTPARAREAHIQMKAAALRGVQ 3092
Query: 94 NKLFGLDGNVSTMEENTERHTAEDVNRNMHS 2
NKLFGLDGNVSTMEENTERHTAEDVNRNMHS
Sbjct: 3093 NKLFGLDGNVSTMEENTERHTAEDVNRNMHS 3123
>dbj|BAI60051.1| polyprotein [Japanese yam mosaic virus]
Length = 647
Score = 1093 bits (2828), Expect = 0.0
Identities = 533/571 (93%), Positives = 548/571 (95%)
Frame = -2
Query: 1714 WDKLLTELPDNWIHCDADGSQFDSSLSPYLINAVLNIRLHFMESWDIGEQMLRNLYTEIV 1535
WD+LLT+LPDNWIHCDADGSQFDSSLSPYLINAVLNIRLHFMESWDIGEQMLRNLYTEIV
Sbjct: 70 WDELLTKLPDNWIHCDADGSQFDSSLSPYLINAVLNIRLHFMESWDIGEQMLRNLYTEIV 129
Query: 1534 YTPIATPDGTIVKKFKGNNSGQPSTVVDNTLMVLLALKYSLLKDGIKAEMHKQIIRYFVN 1355
YTPIATPDGTIVKKFKGNNSGQPSTVVDNTLMVLLALKYSLLKDG+KAEMHKQIIRYFVN
Sbjct: 130 YTPIATPDGTIVKKFKGNNSGQPSTVVDNTLMVLLALKYSLLKDGVKAEMHKQIIRYFVN 189
Query: 1354 GDDLLISVDPEHESLLDTMQGNFKELGLKYDFNSRTKDKSELWFMSHQGKRIENMWIPKL 1175
GDDLLIS+DPE+ESLLDTMQGNFKELGLKY FNSRTKDKSELWFMSHQGKRIENMW+PKL
Sbjct: 190 GDDLLISIDPEYESLLDTMQGNFKELGLKYPFNSRTKDKSELWFMSHQGKRIENMWVPKL 249
Query: 1174 EQERIVSILEWDRSKEPSNRMEAICAAMIESWGHIELTHQIRRFYAWLIGQAPYSGLAEI 995
IVSILEWDRSKEPSNRMEAICAAMI+SWGH LTHQIRRFY WL+GQAPYSGLAEI
Sbjct: 250 LYPPIVSILEWDRSKEPSNRMEAICAAMIKSWGHRGLTHQIRRFYGWLLGQAPYSGLAEI 309
Query: 994 GKAPYIAESALRKLYLDKDADQSAIEIYLRAIFEDYATEPEDLFVYHQSGEDTLDAGAST 815
GKAPYIAESALRKLYLDKDADQSAIEIYL+AIFEDY TEPEDL VYHQSGEDTLDAG S
Sbjct: 310 GKAPYIAESALRKLYLDKDADQSAIEIYLKAIFEDYTTEPEDLLVYHQSGEDTLDAGTSD 369
Query: 814 QSKSKKQEGPRPTQGESPSTEGFEPADDPTGKGKQQTVISLEKDVNIGTMGTFAVPRLKG 635
KSKKQEGP+ QGESP+TEGFEP DDPT KGKQQTVI+LEKDVNIGTMGTFAVPR KG
Sbjct: 370 PGKSKKQEGPKSVQGESPATEGFEPGDDPTRKGKQQTVINLEKDVNIGTMGTFAVPRGKG 429
Query: 634 LATKMNMPRVRGKAAMNLDHLLLYNPEQVDLANTRATRKQFDTWYDGVKRDYELDDSSMQ 455
LATKMNMPRVRGKAAMNLDHLLLYNPEQVDLANTRATRKQFDTWYDGVKRDYELDDSSMQ
Sbjct: 430 LATKMNMPRVRGKAAMNLDHLLLYNPEQVDLANTRATRKQFDTWYDGVKRDYELDDSSMQ 489
Query: 454 ILLNGLMVWCIENGTSPNINGMWVMMDGEEQIEYPIKPLIDHAKPTFRQIMAHFSNVAEA 275
I+LNGLMVWCIENGTSPN+NGMWVMMDGEEQIEYPIKPLIDHAKPTFRQIMAHFSNVAEA
Sbjct: 490 IILNGLMVWCIENGTSPNVNGMWVMMDGEEQIEYPIKPLIDHAKPTFRQIMAHFSNVAEA 549
Query: 274 YIEKRNQEKAYMPRYGLQRNLTDMSLARYAFDFYEVTSKTPARAREAHIQMKAAALRGVQ 95
YIEKRNQE+AYMPRYGLQRNLTDMSLARY FDFYEVTSK PAR REAHIQMKAAA RGVQ
Sbjct: 550 YIEKRNQERAYMPRYGLQRNLTDMSLARYGFDFYEVTSKPPARVREAHIQMKAAAFRGVQ 609
Query: 94 NKLFGLDGNVSTMEENTERHTAEDVNRNMHS 2
NKLFGLDGNVSTMEENTERHTAEDVNRNMHS
Sbjct: 610 NKLFGLDGNVSTMEENTERHTAEDVNRNMHS 640
>ref|NP_051161.1| polyprotein [Japanese yam mosaic virus] gi|6277343|dbj|BAA86288.1|
polyprotein [Japanese yam mosaic virus]
Length = 3132
Score = 1087 bits (2811), Expect = 0.0
Identities = 526/571 (92%), Positives = 552/571 (96%)
Frame = -2
Query: 1714 WDKLLTELPDNWIHCDADGSQFDSSLSPYLINAVLNIRLHFMESWDIGEQMLRNLYTEIV 1535
W++LLT+LPD WIHCDADGSQFDSSLSPYLINAVLNIRLHFME+WDIGEQMLRNLYTEIV
Sbjct: 2555 WNELLTKLPDGWIHCDADGSQFDSSLSPYLINAVLNIRLHFMETWDIGEQMLRNLYTEIV 2614
Query: 1534 YTPIATPDGTIVKKFKGNNSGQPSTVVDNTLMVLLALKYSLLKDGIKAEMHKQIIRYFVN 1355
YTPIATPDGTIVKKFKGNNSGQPSTVVDNTLMVLLALKYSLLKDG++AE HKQ+I+YFVN
Sbjct: 2615 YTPIATPDGTIVKKFKGNNSGQPSTVVDNTLMVLLALKYSLLKDGVEAEKHKQVIKYFVN 2674
Query: 1354 GDDLLISVDPEHESLLDTMQGNFKELGLKYDFNSRTKDKSELWFMSHQGKRIENMWIPKL 1175
GDDLLIS+DP +E LLDTMQGNFKELGLKYDFNSRT+DK ELWFMSHQGKR+E++WIPKL
Sbjct: 2675 GDDLLISIDPAYEGLLDTMQGNFKELGLKYDFNSRTRDKGELWFMSHQGKRVEDIWIPKL 2734
Query: 1174 EQERIVSILEWDRSKEPSNRMEAICAAMIESWGHIELTHQIRRFYAWLIGQAPYSGLAEI 995
EQERIVSILEWDRSKEP NRMEAICAAMIESWGH ELTHQIRRFYAWLIGQAPYSGLAEI
Sbjct: 2735 EQERIVSILEWDRSKEPGNRMEAICAAMIESWGHQELTHQIRRFYAWLIGQAPYSGLAEI 2794
Query: 994 GKAPYIAESALRKLYLDKDADQSAIEIYLRAIFEDYATEPEDLFVYHQSGEDTLDAGAST 815
GKAPYIAESALRKLYLDKDADQSAIE+YLRAIFEDY TEPEDLFVYHQSG+DTLDAG S
Sbjct: 2795 GKAPYIAESALRKLYLDKDADQSAIEVYLRAIFEDYTTEPEDLFVYHQSGDDTLDAGTSA 2854
Query: 814 QSKSKKQEGPRPTQGESPSTEGFEPADDPTGKGKQQTVISLEKDVNIGTMGTFAVPRLKG 635
SK++KQE TQG +P+ EGFEPADDPTGK KQQTVI+LEKDVN+GT+GTFAVPRLKG
Sbjct: 2855 PSKARKQESASSTQGIAPTMEGFEPADDPTGKSKQQTVINLEKDVNVGTVGTFAVPRLKG 2914
Query: 634 LATKMNMPRVRGKAAMNLDHLLLYNPEQVDLANTRATRKQFDTWYDGVKRDYELDDSSMQ 455
LATKM+MPRVRGKAAMNLDHLL+YNPEQVDLANTRATRKQFDTWYDGVKRDYELDDSSMQ
Sbjct: 2915 LATKMSMPRVRGKAAMNLDHLLVYNPEQVDLANTRATRKQFDTWYDGVKRDYELDDSSMQ 2974
Query: 454 ILLNGLMVWCIENGTSPNINGMWVMMDGEEQIEYPIKPLIDHAKPTFRQIMAHFSNVAEA 275
I+LNGLMVWCIENGTSPNINGMWVMMDGEEQIEYPIKPLIDHAKPTFRQIMAHFS VAEA
Sbjct: 2975 IILNGLMVWCIENGTSPNINGMWVMMDGEEQIEYPIKPLIDHAKPTFRQIMAHFSYVAEA 3034
Query: 274 YIEKRNQEKAYMPRYGLQRNLTDMSLARYAFDFYEVTSKTPARAREAHIQMKAAALRGVQ 95
YIEKRNQEKAYMPRYGLQRNLTDMSLARYAFDFYEVTSKTPARAREAHIQMKAAALRGVQ
Sbjct: 3035 YIEKRNQEKAYMPRYGLQRNLTDMSLARYAFDFYEVTSKTPARAREAHIQMKAAALRGVQ 3094
Query: 94 NKLFGLDGNVSTMEENTERHTAEDVNRNMHS 2
NKLFGLDGNVSTMEENTERHTAEDVNRNMHS
Sbjct: 3095 NKLFGLDGNVSTMEENTERHTAEDVNRNMHS 3125
>dbj|BAF31156.1| polyprotein [Turnip mosaic virus]
Length = 3164
Score = 840 bits (2171), Expect = 0.0
Identities = 408/571 (71%), Positives = 475/571 (83%)
Frame = -2
Query: 1714 WDKLLTELPDNWIHCDADGSQFDSSLSPYLINAVLNIRLHFMESWDIGEQMLRNLYTEIV 1535
WD+LL LPD W++CDADGSQFDSSLSPYLINAVLNIRL FME WD+GE MLRNLYTEIV
Sbjct: 2590 WDRLLESLPDGWVYCDADGSQFDSSLSPYLINAVLNIRLEFMEEWDVGEVMLRNLYTEIV 2649
Query: 1534 YTPIATPDGTIVKKFKGNNSGQPSTVVDNTLMVLLALKYSLLKDGIKAEMHKQIIRYFVN 1355
YTPI+TPDGT+VKKFKGNNSGQPSTVVDNTLMV+LA+ YSL K GI +E+ IIR+FVN
Sbjct: 2650 YTPISTPDGTLVKKFKGNNSGQPSTVVDNTLMVILAVNYSLKKSGIPSELRDSIIRFFVN 2709
Query: 1354 GDDLLISVDPEHESLLDTMQGNFKELGLKYDFNSRTKDKSELWFMSHQGKRIENMWIPKL 1175
GDDLL+SV PE+E +LDTM NF+ELGLKY F+SRT++K +LWFMSHQG + E +WIPKL
Sbjct: 2710 GDDLLLSVHPEYEYILDTMADNFRELGLKYTFDSRTREKGDLWFMSHQGHKREGIWIPKL 2769
Query: 1174 EQERIVSILEWDRSKEPSNRMEAICAAMIESWGHIELTHQIRRFYAWLIGQAPYSGLAEI 995
E ERIVSILEWDRSKEP +R+EAICAAMIESWG+ +LTH+IR+FYAW+I QAP+S LA+
Sbjct: 2770 EPERIVSILEWDRSKEPCHRLEAICAAMIESWGYDKLTHEIRKFYAWMIEQAPFSSLAQE 2829
Query: 994 GKAPYIAESALRKLYLDKDADQSAIEIYLRAIFEDYATEPEDLFVYHQSGEDTLDAGAST 815
GKAPYIAE+ALRKLYLDK+ Q + YL+AIFEDY + + FVYHQ+GE TLDAG +
Sbjct: 2830 GKAPYIAETALRKLYLDKEPAQEDLTHYLQAIFEDY-EDGAEAFVYHQAGE-TLDAGLTD 2887
Query: 814 QSKSKKQEGPRPTQGESPSTEGFEPADDPTGKGKQQTVISLEKDVNIGTMGTFAVPRLKG 635
+ K ++E + E E + GK Q +K+VN GT GTF+VPRLK
Sbjct: 2888 EQKQAEKEKKEREKAEK-ERERQKQLALKKGKNTAQEEGERDKEVNAGTSGTFSVPRLKS 2946
Query: 634 LATKMNMPRVRGKAAMNLDHLLLYNPEQVDLANTRATRKQFDTWYDGVKRDYELDDSSMQ 455
L +KM +PR + A+NLDHL+LY PEQ DL+NTR+TRKQFDTW++GV DYEL + MQ
Sbjct: 2947 LTSKMRVPRYEQRVALNLDHLILYTPEQTDLSNTRSTRKQFDTWFEGVMADYELTEDKMQ 3006
Query: 454 ILLNGLMVWCIENGTSPNINGMWVMMDGEEQIEYPIKPLIDHAKPTFRQIMAHFSNVAEA 275
I+LNGLMVWCIENGTSPNINGMWVMMDG++Q+E+PIKPLIDHAKPTFRQIMAHFS+VAEA
Sbjct: 3007 IILNGLMVWCIENGTSPNINGMWVMMDGDDQVEFPIKPLIDHAKPTFRQIMAHFSDVAEA 3066
Query: 274 YIEKRNQEKAYMPRYGLQRNLTDMSLARYAFDFYEVTSKTPARAREAHIQMKAAALRGVQ 95
YIEKRNQ++ YMPRYGLQRNLTDMSLARYAFDFYE+TS+TP RAREAHIQMKAAALRG
Sbjct: 3067 YIEKRNQDRPYMPRYGLQRNLTDMSLARYAFDFYEMTSRTPIRAREAHIQMKAAALRGAN 3126
Query: 94 NKLFGLDGNVSTMEENTERHTAEDVNRNMHS 2
N LFGLDGNV T ENTERHT EDVNRNMH+
Sbjct: 3127 NNLFGLDGNVGTTVENTERHTTEDVNRNMHN 3157
>dbj|BAF31166.1| polyprotein [Turnip mosaic virus]
Length = 3164
Score = 839 bits (2168), Expect = 0.0
Identities = 408/571 (71%), Positives = 475/571 (83%)
Frame = -2
Query: 1714 WDKLLTELPDNWIHCDADGSQFDSSLSPYLINAVLNIRLHFMESWDIGEQMLRNLYTEIV 1535
WD+LL LPD+W++CDADGSQFDSSLSPYLINAVLNIRL FME WD+GE MLRNLYTEIV
Sbjct: 2590 WDRLLESLPDSWVYCDADGSQFDSSLSPYLINAVLNIRLEFMEEWDVGEVMLRNLYTEIV 2649
Query: 1534 YTPIATPDGTIVKKFKGNNSGQPSTVVDNTLMVLLALKYSLLKDGIKAEMHKQIIRYFVN 1355
YTPI+TPDGT+VKKFKGNNSGQPSTVVDNTLMV+LA+ YSL K GI +E+ IIR+FVN
Sbjct: 2650 YTPISTPDGTLVKKFKGNNSGQPSTVVDNTLMVILAVNYSLKKSGIPSELRNSIIRFFVN 2709
Query: 1354 GDDLLISVDPEHESLLDTMQGNFKELGLKYDFNSRTKDKSELWFMSHQGKRIENMWIPKL 1175
GDDLL+SV PE+E +LDTM NF+ELGLKY F+SRTK+K +LWFMSHQG + E +WIPKL
Sbjct: 2710 GDDLLLSVHPEYEYILDTMADNFRELGLKYTFDSRTKEKGDLWFMSHQGHKREGIWIPKL 2769
Query: 1174 EQERIVSILEWDRSKEPSNRMEAICAAMIESWGHIELTHQIRRFYAWLIGQAPYSGLAEI 995
E ERIVSILEWDRSKEP +R+EAICAAMIESWG+ +LTH+IR+FYAW+I QAP+S LA+
Sbjct: 2770 EPERIVSILEWDRSKEPCHRLEAICAAMIESWGYDKLTHEIRKFYAWMIEQAPFSSLAQE 2829
Query: 994 GKAPYIAESALRKLYLDKDADQSAIEIYLRAIFEDYATEPEDLFVYHQSGEDTLDAGAST 815
GKAPYIAE+ALRKLYLDK+ Q + YL+AIFEDY + + VYHQ+GE TLDAG +
Sbjct: 2830 GKAPYIAETALRKLYLDKEPAQEDLTHYLQAIFEDY-EDGAEACVYHQAGE-TLDAGLTD 2887
Query: 814 QSKSKKQEGPRPTQGESPSTEGFEPADDPTGKGKQQTVISLEKDVNIGTMGTFAVPRLKG 635
+ K ++E + E E + GK Q +K+VN GT GTF+VPRLK
Sbjct: 2888 EQKQAEKEKKEREKAEK-ERERQKQLALKKGKNAAQEEGERDKEVNAGTSGTFSVPRLKS 2946
Query: 634 LATKMNMPRVRGKAAMNLDHLLLYNPEQVDLANTRATRKQFDTWYDGVKRDYELDDSSMQ 455
L +KM +PR + A+NLDHL+LY PEQ DL+NTR+TRKQFDTW++GV DYEL + MQ
Sbjct: 2947 LTSKMRVPRYEQRVALNLDHLILYTPEQTDLSNTRSTRKQFDTWFEGVMADYELTEDKMQ 3006
Query: 454 ILLNGLMVWCIENGTSPNINGMWVMMDGEEQIEYPIKPLIDHAKPTFRQIMAHFSNVAEA 275
I+LNGLMVWCIENGTSPNINGMWVMMDG++Q+E+PIKPLIDHAKPTFRQIMAHFS+VAEA
Sbjct: 3007 IILNGLMVWCIENGTSPNINGMWVMMDGDDQVEFPIKPLIDHAKPTFRQIMAHFSDVAEA 3066
Query: 274 YIEKRNQEKAYMPRYGLQRNLTDMSLARYAFDFYEVTSKTPARAREAHIQMKAAALRGVQ 95
YIEKRNQ++ YMPRYGLQRNLTDMSLARYAFDFYE+TS+TP RAREAHIQMKAAALRG
Sbjct: 3067 YIEKRNQDRPYMPRYGLQRNLTDMSLARYAFDFYEMTSRTPIRAREAHIQMKAAALRGAN 3126
Query: 94 NKLFGLDGNVSTMEENTERHTAEDVNRNMHS 2
N LFGLDGNV T ENTERHT EDVNRNMH+
Sbjct: 3127 NNLFGLDGNVGTTVENTERHTTEDVNRNMHN 3157